Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G083500.1 | Wheat | cytosol | 95.13 | 92.22 |
| TraesCS3A01G069800.2 | Wheat | cytosol | 87.11 | 91.86 |
| TraesCS3B01G081900.1 | Wheat | cytosol | 61.32 | 91.24 |
| HORVU3Hr1G012860.1 | Barley | cytosol | 87.41 | 88.31 |
| TraesCS3D01G068100.1 | Wheat | extracellular | 75.13 | 72.48 |
| TraesCS3D01G068200.1 | Wheat | cytosol | 44.57 | 71.85 |
| Os11t0676800-00 | Rice | cytosol | 35.13 | 54.06 |
| Os11t0673900-00 | Rice | cytosol, plasma membrane | 45.38 | 53.66 |
| KXG29105 | Sorghum | cytosol | 55.43 | 53.58 |
| GSMUA_Achr2P11320_001 | Banana | cytosol | 38.78 | 37.49 |
| GSMUA_Achr1P14030_001 | Banana | cytosol | 36.04 | 33.65 |
| TraesCS3D01G073600.1 | Wheat | cytosol, mitochondrion, plasma membrane | 26.09 | 33.59 |
| GSMUA_Achr1P14020_001 | Banana | cytosol | 35.03 | 33.46 |
| TraesCS3D01G073500.1 | Wheat | cytosol | 29.75 | 32.56 |
| TraesCS7D01G552700.1 | Wheat | cytosol | 33.4 | 30.13 |
| TraesCS7D01G544100.1 | Wheat | cytosol | 21.52 | 29.9 |
| TraesCS1D01G242200.1 | Wheat | cytosol | 17.66 | 29.15 |
| TraesCS6D01G400300.1 | Wheat | cytosol | 15.74 | 28.65 |
| TraesCS5D01G428900.1 | Wheat | cytosol | 20.0 | 28.43 |
| TraesCS6D01G400700.2 | Wheat | cytosol | 20.81 | 28.08 |
| TraesCS2D01G567200.1 | Wheat | cytosol | 20.91 | 28.07 |
| TraesCS7D01G543900.1 | Wheat | endoplasmic reticulum | 13.5 | 28.06 |
| TraesCS2D01G495900.1 | Wheat | cytosol, plastid | 22.13 | 28.02 |
| TraesCS7D01G039000.1 | Wheat | cytosol | 14.42 | 27.2 |
| TraesCS4D01G004200.1 | Wheat | cytosol | 29.34 | 27.16 |
| TraesCS7D01G465700.1 | Wheat | cytosol | 14.11 | 26.73 |
| TraesCS6D01G400400.1 | Wheat | cytosol | 13.4 | 26.56 |
| TraesCS7D01G544600.1 | Wheat | cytosol, endoplasmic reticulum | 27.01 | 26.47 |
| TraesCS3D01G528100.2 | Wheat | plasma membrane | 29.64 | 26.28 |
| TraesCS2D01G567500.1 | Wheat | cytosol | 27.82 | 26.25 |
| TraesCS1D01G383800.1 | Wheat | cytosol | 28.43 | 26.12 |
| TraesCS4D01G004100.1 | Wheat | cytosol | 28.22 | 26.08 |
| TraesCS3D01G036300.1 | Wheat | cytosol | 17.77 | 25.93 |
| VIT_04s0023g02380.t01 | Wine grape | cytosol | 21.83 | 25.29 |
| TraesCS5D01G185600.1 | Wheat | cytosol | 26.6 | 25.0 |
| PGSC0003DMT400079012 | Potato | cytosol | 3.96 | 24.84 |
| TraesCS7D01G465800.1 | Wheat | mitochondrion | 13.6 | 24.36 |
| Solyc07g053020.1.1 | Tomato | cytosol | 21.02 | 24.3 |
| PGSC0003DMT400009065 | Potato | cytosol | 20.81 | 24.17 |
| PGSC0003DMT400067354 | Potato | cytosol | 21.42 | 24.11 |
| TraesCS5D01G185700.1 | Wheat | plastid | 26.5 | 24.08 |
| AT3G50950.1 | Thale cress | cytosol | 20.81 | 24.06 |
| Solyc02g084890.1.1 | Tomato | cytosol, extracellular, nucleus | 20.71 | 24.0 |
| Solyc07g053010.1.1 | Tomato | cytosol | 20.51 | 22.98 |
| PGSC0003DMT400067280 | Potato | cytosol, mitochondrion | 20.41 | 22.76 |
| TraesCS7D01G038900.1 | Wheat | cytosol | 4.06 | 21.98 |
| TraesCS7D01G544300.1 | Wheat | cytosol | 29.54 | 20.51 |
| TraesCS7D01G544500.1 | Wheat | cytosol | 29.24 | 20.15 |
| TraesCS7D01G525700.1 | Wheat | mitochondrion, plastid | 22.94 | 19.4 |
| TraesCS1D01G149200.1 | Wheat | cytosol | 26.9 | 19.15 |
| TraesCS7D01G544000.1 | Wheat | cytosol | 15.13 | 16.25 |
| CDX73766 | Canola | plastid | 20.91 | 15.96 |
| Bra036845.1-P | Field mustard | plastid | 20.91 | 15.96 |
| TraesCS7D01G436300.1 | Wheat | cytosol | 29.64 | 13.83 |
| TraesCS7D01G544200.1 | Wheat | plasma membrane, plastid, vacuole | 6.8 | 10.5 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G068800.1 | EnsemblPlantsGene:TraesCS3D01G068800 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| InterPro:RX-like_CC | PANTHER:PTHR44518 | PFAM:PF00931 | PRINTS:PR00364 | SEG:seg | SUPFAM:SSF52058 |
| SUPFAM:SSF52540 | TIGR:cd14798 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr3D:+:30278327..30281377
Molecular Weight (calculated)
111054.0 Da
IEP (calculated)
6.227
GRAVY (calculated)
-0.122
Length
985 amino acids
Sequence
(BLAST)
(BLAST)
001: MATILESLLG SCANKLQNII SDEAILILGV EEELAEVLRR VELIRCCIYD AEKRRTKELA VNNWLGQLRD VIYDVDEIMD VARCKGSKLL PDHPSSSSIS
101: ASYKGLSVSS CFCNIRSRHD VAVRIRSLNK RIENISKDTT FLTFSTSTQP TGNGPTSKLI RSSNLVEPNL VGGVGKTTLA QKIFNDQKIK GSFKLQAWIC
201: VSRDYNEVTV LKEVLRNIGV YHEQGETIAE LQRKLAETVE GKSFFLVLDD VWHPNVWTDL LRTPFHTTNS GVILVTTRDD QIAMRIGIQH THQVDLMSAE
301: VGWELLWKSM NIAEEKEVHN LRNTGMDIVD KCGRLPLAIK VTASALASKD LTENEWRKFL GKYSGSHRML SDEIEGALYL SYDELPHRLK QCFLYCALYT
401: EDSIIYRGVV TKLWIAEGFI MEQQGQLLED TAEGYYYELI HRNLLQPDGT IFNQAQCRMH DLLRQLACKL SRDECFIGDV ETLRGENMSK LRCLSVVSKK
501: DKLVLTSMDN MVVKVRTFLA FYGPWKIEDA FFKRFLLLRV LALNYSIVQN IPDYIGKLIH LRLLDLGHTG ISHLPESIGS LKNLQVLSLI NCDALQSLPS
601: AMTQLCNLRC LRLTGTKVNQ VPKGIGKLNL LTELRGFLVG DISDNADVQD GWKLEELSSL PQMMYLNLVK LERTAHCRTN VVLEDKKHLK ELVLEWTTHG
701: EGLYSEDVSN AEKVFELLVP PCNLETLYIF GFFGQRYPTW FGTTCLSSVT HLFLKNLRSC VDLPPVGQLP NLKFLRIDGA HAVTKVGPEF VSYRVGEPIS
801: NGFIAFPKLE WFFIKDMPNW EEWSFFKGVE NVVDEGGEDG GAEICNGDAQ SIRLQLLPRL VKLKVEGCPK LRALPRQLGE DTASLKELLL IGANNLKAVE
901: DLTVLELLVI EDCEGLEKVS NLPQVSKLQV RGCPNLSHVE GLGNLQQLGL GEDMQEISSR WVPGLQNQRQ RLHGEDLDVY TLSTG
101: ASYKGLSVSS CFCNIRSRHD VAVRIRSLNK RIENISKDTT FLTFSTSTQP TGNGPTSKLI RSSNLVEPNL VGGVGKTTLA QKIFNDQKIK GSFKLQAWIC
201: VSRDYNEVTV LKEVLRNIGV YHEQGETIAE LQRKLAETVE GKSFFLVLDD VWHPNVWTDL LRTPFHTTNS GVILVTTRDD QIAMRIGIQH THQVDLMSAE
301: VGWELLWKSM NIAEEKEVHN LRNTGMDIVD KCGRLPLAIK VTASALASKD LTENEWRKFL GKYSGSHRML SDEIEGALYL SYDELPHRLK QCFLYCALYT
401: EDSIIYRGVV TKLWIAEGFI MEQQGQLLED TAEGYYYELI HRNLLQPDGT IFNQAQCRMH DLLRQLACKL SRDECFIGDV ETLRGENMSK LRCLSVVSKK
501: DKLVLTSMDN MVVKVRTFLA FYGPWKIEDA FFKRFLLLRV LALNYSIVQN IPDYIGKLIH LRLLDLGHTG ISHLPESIGS LKNLQVLSLI NCDALQSLPS
601: AMTQLCNLRC LRLTGTKVNQ VPKGIGKLNL LTELRGFLVG DISDNADVQD GWKLEELSSL PQMMYLNLVK LERTAHCRTN VVLEDKKHLK ELVLEWTTHG
701: EGLYSEDVSN AEKVFELLVP PCNLETLYIF GFFGQRYPTW FGTTCLSSVT HLFLKNLRSC VDLPPVGQLP NLKFLRIDGA HAVTKVGPEF VSYRVGEPIS
801: NGFIAFPKLE WFFIKDMPNW EEWSFFKGVE NVVDEGGEDG GAEICNGDAQ SIRLQLLPRL VKLKVEGCPK LRALPRQLGE DTASLKELLL IGANNLKAVE
901: DLTVLELLVI EDCEGLEKVS NLPQVSKLQV RGCPNLSHVE GLGNLQQLGL GEDMQEISSR WVPGLQNQRQ RLHGEDLDVY TLSTG
0001: MAGELISFGI QNLWNLLSQE CELFQGVEDQ VTELKRDLNL LSSFLKDADA KKHTSAVVKN CVEEIKEIIY DGEDTIETFV LEQNLGKTSG IKKSIRRLAC
0101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRPRFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
0201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
0301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
0401: FNDDNNNTCN YVLSLSFEEL PSYLKHCFLY LAHFPDDYEI NVKNLSYYWA AEGIFQPRHY DGEIIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
0501: MMREVCLLKA KEENFLQITS SRTSTGNSLS IVTSRRLVYQ YPITLDVEKD INDPKLRSLV VVANTYMFWG GWSWMLLGSS FIRLELLRVL DIHRAKLKGG
0601: KLASSIGQLI HLRYLNLKHA EVTHIPYSLG NLKLLIYLNL VILVSGSTLV PNVLKEMQQL RYLALPKDMG RKTKLELSNL VKLETLKNFS TKNCSLEDLR
0701: GMVRLRTLTI ELRKETSLET LAASIGGLKY LESLTITDLG SEMRTKEAGI VFDFVYLKTL TLKLYMPRLS KEQHFPSHLT TLYLQHCRLE EDPMPILEKL
0801: HQLKELELRR KSFSGKEMVC SSGGFPQLQK LSIKGLEEWE DWKVEESSMP VLHTLDIRDC RKLKQLPDEH LPSHLTSISL FFCCLEEDPM PTLERLVHLK
0901: ELQLLFRSFS GRIMVCAGSG FPQLHKLKLS ELDGLEEWIV EDGSMPQLHT LEIRRCPKLK KLPNGFPQLQ NLELNELEEW EEWIVEDGSM PLLHTLRIWN
1001: CPKLKQLPDG LRFIYSLKNL TVPKRWKKRL SKGGEDYYKV QHIPSVEFY
0101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRPRFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
0201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
0301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
0401: FNDDNNNTCN YVLSLSFEEL PSYLKHCFLY LAHFPDDYEI NVKNLSYYWA AEGIFQPRHY DGEIIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
0501: MMREVCLLKA KEENFLQITS SRTSTGNSLS IVTSRRLVYQ YPITLDVEKD INDPKLRSLV VVANTYMFWG GWSWMLLGSS FIRLELLRVL DIHRAKLKGG
0601: KLASSIGQLI HLRYLNLKHA EVTHIPYSLG NLKLLIYLNL VILVSGSTLV PNVLKEMQQL RYLALPKDMG RKTKLELSNL VKLETLKNFS TKNCSLEDLR
0701: GMVRLRTLTI ELRKETSLET LAASIGGLKY LESLTITDLG SEMRTKEAGI VFDFVYLKTL TLKLYMPRLS KEQHFPSHLT TLYLQHCRLE EDPMPILEKL
0801: HQLKELELRR KSFSGKEMVC SSGGFPQLQK LSIKGLEEWE DWKVEESSMP VLHTLDIRDC RKLKQLPDEH LPSHLTSISL FFCCLEEDPM PTLERLVHLK
0901: ELQLLFRSFS GRIMVCAGSG FPQLHKLKLS ELDGLEEWIV EDGSMPQLHT LEIRRCPKLK KLPNGFPQLQ NLELNELEEW EEWIVEDGSM PLLHTLRIWN
1001: CPKLKQLPDG LRFIYSLKNL TVPKRWKKRL SKGGEDYYKV QHIPSVEFY
Arabidopsis Description
RF9Probable disease resistance protein RDL6 [Source:UniProtKB/Swiss-Prot;Acc:P0DI18]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.