Factsheet for VIT_04s0023g02380.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400009065	Potato	cytosol	63.88	64.03
Solyc02g084890.1.1	Tomato	cytosol, extracellular, nucleus	63.65	63.65
AT3G50950.1	Thale cress	cytosol	59.18	59.04
VIT_19s0014g03950.t01	Wine grape	cytosol	10.24	44.16
Bra036845.1-P	Field mustard	plastid	58.0	38.19
CDX73766	Canola	plastid	58.0	38.19
HORVU3Hr1G012800.1	Barley	cytosol	12.94	33.13
TraesCS3B01G081400.1	Wheat	cytosol	15.53	28.82
HORVU3Hr1G012610.1	Barley	plastid	10.35	28.66
TraesCS3B01G081300.1	Wheat	cytosol	15.06	27.0
TraesCS5A01G533700.1	Wheat	cytosol	20.47	26.98
HORVU3Hr1G012760.2	Barley	cytosol	14.59	26.9
TraesCS3A01G068300.1	Wheat	cytosol, extracellular	14.71	26.88
Os11t0676200-00	Rice	cytosol	17.76	26.49
GSMUA_Achr1P12540_001	Banana	cytosol	18.59	26.47
GSMUA_AchrUn_...	Banana	cytosol	8.0	26.25
TraesCS3B01G083700.1	Wheat	cytosol	16.82	26.14
TraesCS3B01G081900.1	Wheat	cytosol	20.35	26.13
TraesCS3A01G068600.1	Wheat	cytosol	14.47	26.11
HORVU3Hr1G012650.19	Barley	cytosol	14.0	25.81
Os11t0676800-00	Rice	cytosol	19.29	25.62
TraesCS3B01G082500.1	Wheat	cytosol	16.35	25.41
TraesCS3D01G068200.1	Wheat	cytosol	18.24	25.37
GSMUA_Achr3P27817_001	Banana	cytosol	8.59	25.26
Os11t0676100-00	Rice	cytosol, plasma membrane	12.59	25.24
GSMUA_Achr10P...	Banana	cytosol	23.29	24.91
TraesCS3A01G068500.2	Wheat	cytosol, extracellular	16.71	24.78
TraesCS6B01G070200.1	Wheat	cytosol	25.88	24.1
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane	22.47	24.06
GSMUA_Achr10P...	Banana	cytosol	25.88	23.91
TraesCS4B01G365400.1	Wheat	cytosol	23.18	23.91
TraesCS3A01G069200.1	Wheat	extracellular	16.82	23.71
TraesCS3A01G068900.1	Wheat	cytosol	9.76	23.65
Os11t0673900-00	Rice	cytosol, plasma membrane	23.06	23.53
GSMUA_Achr2P11320_001	Banana	cytosol	27.41	22.87
TraesCS3B01G088100.1	Wheat	cytosol	15.06	22.65
TraesCS3B01G083600.1	Wheat	cytosol	26.47	22.61
TraesCS3A01G068700.1	Wheat	cytosol	26.71	22.41
GSMUA_Achr3P27790_001	Banana	cytosol	23.76	22.3
TraesCS2B01G607700.1	Wheat	cytosol	26.47	22.28
TraesCS3B01G083500.1	Wheat	cytosol	26.59	22.24
GSMUA_Achr3P27810_001	Banana	cytosol, endoplasmic reticulum	22.94	22.23
TraesCS3B01G081500.2	Wheat	cytosol	26.59	22.2
TraesCS3B01G082400.1	Wheat	cytosol	26.12	22.18
Os11t0674400-00	Rice	cytosol, plasma membrane	26.94	22.17
GSMUA_Achr1P14020_001	Banana	cytosol	26.82	22.11
GSMUA_AchrUn_...	Banana	cytosol	17.88	22.09
TraesCS3B01G081600.1	Wheat	cytosol	26.35	22.05
TraesCS1B01G169700.1	Wheat	cytosol	24.0	21.89
GSMUA_Achr3P28030_001	Banana	plasma membrane	27.76	21.85
TraesCS3D01G068800.1	Wheat	cytosol	25.29	21.83
TraesCS3A01G068200.1	Wheat	cytosol	26.12	21.81
GSMUA_Achr3P27830_001	Banana	cytosol, peroxisome	20.47	21.72
TraesCS3B01G082000.1	Wheat	cytosol	7.18	21.71
TraesCS3A01G069300.1	Wheat	cytosol	25.76	21.7
KXG29105	Sorghum	cytosol	26.0	21.69
GSMUA_Achr1P14030_001	Banana	cytosol	26.82	21.61
TraesCS3B01G081700.1	Wheat	cytosol	25.65	21.56
TraesCS7A01G374100.1	Wheat	cytosol	25.29	21.54
TraesCS3A01G068800.1	Wheat	cytosol, extracellular	25.76	21.53
TraesCS3B01G082900.1	Wheat	cytosol	6.94	21.53
GSMUA_Achr2P03610_001	Banana	cytosol	26.12	21.53
TraesCS3D01G068100.1	Wheat	extracellular	25.76	21.45
TraesCS5B01G291600.1	Wheat	cytosol, extracellular	25.76	21.45
Os11t0623800-00	Rice	cytosol	26.59	21.44
GSMUA_Achr9P23050_001	Banana	cytosol	27.41	21.44
OQU89955	Sorghum	cytosol	27.18	21.43
TraesCS3B01G082800.2	Wheat	cytosol	25.65	21.31
GSMUA_Achr1P12550_001	Banana	cytosol	26.59	21.3
GSMUA_AchrUn_...	Banana	cytosol	18.0	21.22
HORVU3Hr1G012510.23	Barley	cytosol	25.41	21.18
TraesCS3A01G069800.2	Wheat	cytosol	23.18	21.09
GSMUA_AchrUn_...	Banana	cytosol	15.65	21.08
Os08t0332600-00	Rice	cytosol	20.0	21.04
HORVU3Hr1G012340.8	Barley	cytosol	17.18	20.92
GSMUA_AchrUn_...	Banana	cytosol	14.12	20.73
HORVU3Hr1G012860.1	Barley	cytosol	23.76	20.72
GSMUA_Achr11P...	Banana	cytosol	25.18	20.7
HORVU3Hr1G012660.4	Barley	cytosol	25.41	20.69
TraesCS3B01G082200.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	23.29	20.69
TraesCS5A01G292200.1	Wheat	cytosol	24.82	20.67
KXG39005	Sorghum	cytosol	25.18	20.6
GSMUA_Achr10P...	Banana	cytosol	25.65	20.55
HORVU3Hr1G013270.1	Barley	cytosol	23.88	20.55
Zm00001d021492_P002	Maize	cytosol	26.12	20.54
OQU84002	Sorghum	cytosol	15.18	20.51
GSMUA_Achr10P...	Banana	cytosol	25.41	20.45
TraesCS3B01G088000.1	Wheat	cytosol	23.76	20.45
TraesCS3B01G083800.1	Wheat	cytosol	16.47	20.32
GSMUA_Achr9P20610_001	Banana	cytosol	25.41	20.3
GSMUA_Achr10P...	Banana	cytosol	25.41	20.24
Os01t0149500-01	Rice	mitochondrion, nucleus	23.53	20.22
GSMUA_Achr10P...	Banana	cytosol	25.53	20.19
Os01t0149350-00	Rice	cytosol	23.41	20.1
HORVU3Hr1G012880.4	Barley	cytosol	16.24	20.09
TraesCS3B01G088200.1	Wheat	cytosol	23.29	20.04
TraesCS3D01G073500.1	Wheat	cytosol	21.18	20.0
TraesCS3D01G073600.1	Wheat	cytosol, mitochondrion, plasma membrane	18.0	20.0
TraesCS3A01G073700.1	Wheat	cytosol	23.18	19.96
TraesCS5D01G185600.1	Wheat	cytosol	24.59	19.94
TraesCS3A01G073800.1	Wheat	cytosol	23.18	19.92
KXG20980	Sorghum	cytosol	25.06	19.87
HORVU5Hr1G122310.2	Barley	cytosol	20.94	19.87
Os02t0456800-01	Rice	cytosol	25.41	19.83
Os07t0481400-01	Rice	cytosol	25.18	19.81
HORVU7Hr1G120540.3	Barley	cytosol	25.76	19.8
TraesCS5A01G181200.1	Wheat	mitochondrion	22.71	19.79
TraesCS3B01G485200.1	Wheat	cytosol	22.82	19.76
TraesCS3B01G485300.1	Wheat	cytosol	22.82	19.76
TraesCS7B01G482300.1	Wheat	cytosol, plastid	25.41	19.74
TraesCS7A01G557700.2	Wheat	cytosol	25.29	19.71
HORVU3Hr1G013250.2	Barley	cytosol	22.82	19.62
Zm00001d014876_P005	Maize	cytosol	24.71	19.57
TraesCS5B01G178900.1	Wheat	cytosol	22.35	19.53
OQU80132	Sorghum	cytosol	22.47	19.51
TraesCS7D01G552700.1	Wheat	cytosol	25.06	19.51
GSMUA_AchrUn_...	Banana	cytosol	7.06	19.48
Os09t0313600-00	Rice	plasma membrane	23.88	19.46
HORVU0Hr1G039660.8	Barley	cytosol	23.76	19.24
EER97218	Sorghum	mitochondrion, plasma membrane	24.94	19.0
Zm00001d021491_P001	Maize	cytosol, plasma membrane	24.82	18.96
HORVU3Hr1G012620.2	Barley	cytosol	10.59	18.91
Os07t0481300-01	Rice	cytosol	24.47	18.54
Zm00001d035129_P001	Maize	plasma membrane	22.12	17.8
Os09t0313500-01	Rice	plasma membrane	22.82	17.72
Os11t0673600-00	Rice	cytosol, plasma membrane	9.88	17.0
TraesCS5A01G181400.1	Wheat	plastid	21.53	16.88
GSMUA_AchrUn_...	Banana	cytosol	11.53	16.84
Os11t0677000-00	Rice	cytosol	8.71	16.74
TraesCS5B01G179100.1	Wheat	plastid	21.29	16.7
TraesCS5D01G185700.1	Wheat	plastid	20.94	16.42
TraesCS7B01G491900.1	Wheat	mitochondrion	3.88	16.42
GSMUA_AchrUn_...	Banana	plasma membrane	26.82	15.83
Zm00001d035125_P001	Maize	cytosol, mitochondrion, plasma membrane	22.71	15.26
GSMUA_Achr10P...	Banana	cytosol	6.12	14.81
HORVU5Hr1G055260.1	Barley	mitochondrion, plasma membrane	9.29	14.18
Os11t0675200-00	Rice	cytosol	5.53	14.11
Os11t0677101-00	Rice	plasma membrane	6.47	13.68
Zm00001d032724_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion, plastid	22.12	12.59
KXG38346	Sorghum	nucleus	22.47	12.53
HORVU1Hr1G040540.18	Barley	mitochondrion	22.12	12.44
TraesCS1D01G149200.1	Wheat	cytosol	20.12	12.36
TraesCS1A01G152300.1	Wheat	cytosol	19.88	12.21
GSMUA_AchrUn_...	Banana	cytosol	4.59	11.5
TraesCSU01G061600.1	Wheat	cytosol	0.12	0.85
TraesCS6B01G070000.1	Wheat	cytosol	0.0	0.0

Protein Annotations

EntrezGene:100245534	wikigene:100245534	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	EMBL:AM437285
EMBL:AM455310	ProteinID:CAN63363	ProteinID:CAN63363.1	ProteinID:CAN67200	ProteinID:CAN67200.1	ProteinID:CCB44420
ProteinID:CCB44420.1	ncoils:Coil	UniProt:F6GWT5	EMBL:FN594959	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0043531
InterPro:IPR032675	EntrezGene:LOC100245534	wikigene:LOC100245534	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR23155	PANTHER:PTHR23155:SF759	InterPro:RX-like_CC	SUPFAM:SSF52058
SUPFAM:SSF52540	UniParc:UPI00015CB9B9	ArrayExpress:VIT_04s0023g02380	EnsemblPlantsGene:VIT_04s0023g02380	EnsemblPlants:VIT_04s0023g02380.t01	unigene:Vvi.22634
RefSeq:XP_002268940	RefSeq:XP_002268940.1	RefSeq:XP_019075178.1	RefSeq:XP_019075179.1	SEG:seg	:

Description

No Description!

Coordinates

chr4:+:18940831..18943565

Molecular Weight (calculated)

96263.3 Da

IEP (calculated)

6.367

GRAVY (calculated)

-0.255

Length

850 amino acids

Sequence
(BLAST)

001: MVDAVVTVFL EKLLNALEEE GRVLFDFREQ FERLRDELRL MQSFLKDAER LKRKNETLRT VMIGLRELIY EAEDILADCK VQSEGSQDIS GWYAVCFYPT
101: NLPFKYQTGK RLREINEKIT RIKQNIPSFL GVPILSQAEI ADSRNLPVDR WSSSVFDHSQ VVGIEGDTRK VKNWLLEAKD GILAIGVVGM GGVGKTTLAQ
201: VVFNDREMEA RFERRMWVSV TGTPNEKRIL RSMLRNLGDM NVGDDCGELL RKINQYLLGK RFLLVMDDVG ENTNTWWRKI SDGLPKGNGS SIIITTRTKE
301: VATMMGVEEE RTHRPKVLSK DDSWLLFRNV AFAANGGICT SSELENIGRE IVHKCGGLPL AIKAAGGMML YQQPYYHDWK RIADHFRDEL AEEDGSVMAS
401: LELSYEELPS HLKSCFLCLS LYPEDCEITK EQLIHWWIAE GFVPLRRGRL STEAGEDCFS GLTNRCLIEV VEKSYTGAIQ TCKIHDMVRD LVIKKAEDDA
501: FSGPTTASCR HLGIEGDIDR KYDMPNQKLR ALLSTIKTGE VNKVASSNAK KFCDCRYLRV LDISKTIFDK SLTGLLDHIG FLQHLTYLSL SNTHPLTEVP
601: PALEELRNLQ VLDLSYCQNL KMLPSYVTTF EKLTVLDVSH CGSLRYLPKG LGSLSNLQIL LGFKPAKSNQ LEGCRIAELR SLTKLRRLGL QLTQGDEIGD
701: NDDNVLVGLR GLQFLVISCF DSHGDDLIPK LDKLSPPQQL HELSLRFYPG KMNPGWLNPF SLPILRYLSI SSGNLTNMSQ RFWGDGDNTW KIEGLMLESL
801: SDLGMEWSMV QQVMPRLRIV NVSWCPDLDS FPIEDVGFRG GVWKKGERPS

Best Arabidopsis Sequence Match ( AT3G50950.1 )
(BLAST)

001: MVDAVVTVFL EKTLNILEEK GRTVSDYRKQ LEDLQSELKY MQSFLKDAER QKRTNETLRT LVADLRELVY EAEDILVDCQ LADGDDGNEQ RSSNAWLSRL
101: HPARVPLQYK KSKRLQEINE RITKIKSQVE PYFEFITPSN VGRDNGTDRW SSPVYDHTQV VGLEGDKRKI KEWLFRSNDS QLLIMAFVGM GGLGKTTIAQ
201: EVFNDKEIEH RFERRIWVSV SQTFTEEQIM RSILRNLGDA SVGDDIGTLL RKIQQYLLGK RYLIVMDDVW DKNLSWWDKI YQGLPRGQGG SVIVTTRSES
301: VAKRVQARDD KTHRPELLSP DNSWLLFCNV AFAANDGTCE RPELEDVGKE IVTKCKGLPL TIKAVGGLLL CKDHVYHEWR RIAEHFQDEL RGNTSETDNV
401: MSSLQLSYDE LPSHLKSCIL TLSLYPEDCV IPKQQLVHGW IGEGFVMWRN GRSATESGED CFSGLTNRCL IEVVDKTYSG TIITCKIHDM VRDLVIDIAK
501: KDSFSNPEGL NCRHLGISGN FDEKQIKVNH KLRGVVSTTK TGEVNKLNSD LAKKFTDCKY LRVLDISKSI FDAPLSEILD EIASLQHLAC LSLSNTHPLI
601: QFPRSMEDLH NLQILDASYC QNLKQLQPCI VLFKKLLVLD MTNCGSLECF PKGIGSLVKL EVLLGFKPAR SNNGCKLSEV KNLTNLRKLG LSLTRGDQIE
701: EEELDSLINL SKLMSISINC YDSYGDDLIT KIDALTPPHQ LHELSLQFYP GKSSPSWLSP HKLPMLRYMS ICSGNLVKMQ EPFWGNENTH WRIEGLMLSS
801: LSDLDMDWEV LQQSMPYLRT VTANWCPELE SFAIEDVGFR GGVWMKTPLH RT

Arabidopsis Description

RPP13L4Disease resistance RPP13-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q38834]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.