Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | cytosol | 63.06 | 95.51 |
| GSMUA_AchrUn_... | Banana | cytosol | 63.63 | 81.1 |
| GSMUA_AchrUn_... | Banana | cytosol | 23.83 | 80.69 |
| GSMUA_Achr3P27830_001 | Banana | cytosol, peroxisome | 73.09 | 80.03 |
| GSMUA_AchrUn_... | Banana | cytosol | 57.01 | 79.24 |
| GSMUA_Achr3P27790_001 | Banana | cytosol | 81.64 | 79.03 |
| GSMUA_AchrUn_... | Banana | cytosol | 29.99 | 77.58 |
| GSMUA_Achr3P27817_001 | Banana | cytosol | 24.06 | 73.01 |
| GSMUA_Achr3P28030_001 | Banana | plasma membrane | 86.77 | 70.46 |
| GSMUA_AchrUn_... | Banana | cytosol | 24.06 | 68.51 |
| GSMUA_AchrUn_... | Banana | cytosol, plasma membrane | 60.09 | 66.37 |
| GSMUA_AchrUn_... | Banana | cytosol | 48.57 | 59.08 |
| GSMUA_Achr9P23050_001 | Banana | cytosol | 57.47 | 46.37 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 72.52 | 44.17 |
| GSMUA_Achr2P11320_001 | Banana | cytosol | 37.63 | 32.38 |
| GSMUA_Achr1P14020_001 | Banana | cytosol | 36.49 | 31.04 |
| GSMUA_Achr1P14030_001 | Banana | cytosol | 37.06 | 30.81 |
| GSMUA_Achr10P... | Banana | cytosol | 32.27 | 30.76 |
| TraesCS6B01G070200.1 | Wheat | cytosol | 31.13 | 29.9 |
| GSMUA_Achr11P... | Banana | cytosol | 35.01 | 29.69 |
| GSMUA_Achr10P... | Banana | cytosol | 36.15 | 29.49 |
| GSMUA_Achr2P03610_001 | Banana | cytosol | 34.55 | 29.39 |
| GSMUA_AchrUn_... | Banana | cytosol | 19.38 | 29.21 |
| TraesCS1B01G169700.1 | Wheat | cytosol | 30.79 | 28.97 |
| GSMUA_Achr10P... | Banana | cytosol | 35.01 | 28.77 |
| GSMUA_Achr10P... | Banana | cytosol | 26.0 | 28.68 |
| GSMUA_Achr1P12550_001 | Banana | cytosol | 34.55 | 28.56 |
| GSMUA_Achr9P20610_001 | Banana | cytosol | 33.98 | 28.01 |
| GSMUA_Achr10P... | Banana | cytosol | 33.75 | 27.9 |
| GSMUA_Achr1P12540_001 | Banana | cytosol | 18.93 | 27.81 |
| GSMUA_Achr10P... | Banana | cytosol | 33.18 | 27.56 |
| GSMUA_Achr10P... | Banana | cytosol | 10.83 | 27.07 |
| TraesCS5A01G181200.1 | Wheat | mitochondrion | 29.3 | 26.36 |
| TraesCS5B01G178900.1 | Wheat | cytosol | 28.96 | 26.1 |
| EER97218 | Sorghum | mitochondrion, plasma membrane | 32.95 | 25.9 |
| HORVU5Hr1G055260.1 | Barley | mitochondrion, plasma membrane | 16.42 | 25.85 |
| Zm00001d021491_P001 | Maize | cytosol, plasma membrane | 32.5 | 25.61 |
| Os07t0481400-01 | Rice | cytosol | 31.36 | 25.46 |
| OQU89955 | Sorghum | cytosol | 31.01 | 25.23 |
| Zm00001d021492_P002 | Maize | cytosol | 30.9 | 25.07 |
| Os09t0313500-01 | Rice | plasma membrane | 30.9 | 24.75 |
| Os09t0313600-00 | Rice | plasma membrane | 29.42 | 24.74 |
| Os07t0481300-01 | Rice | cytosol | 31.47 | 24.6 |
| TraesCS5D01G185600.1 | Wheat | cytosol | 29.19 | 24.43 |
| PGSC0003DMT400009065 | Potato | cytosol | 23.6 | 24.41 |
| HORVU0Hr1G039660.8 | Barley | cytosol | 29.19 | 24.38 |
| TraesCS5A01G181400.1 | Wheat | plastid | 30.1 | 24.35 |
| TraesCS5B01G179100.1 | Wheat | plastid | 29.65 | 23.99 |
| Solyc07g053020.1.1 | Tomato | cytosol | 23.26 | 23.94 |
| TraesCS5D01G185700.1 | Wheat | plastid | 29.53 | 23.89 |
| Solyc02g084890.1.1 | Tomato | cytosol, extracellular, nucleus | 23.03 | 23.76 |
| PGSC0003DMT400079012 | Potato | cytosol | 4.22 | 23.57 |
| PGSC0003DMT400067354 | Potato | cytosol | 23.03 | 23.09 |
| VIT_04s0023g02380.t01 | Wine grape | cytosol | 22.23 | 22.94 |
| AT3G50950.1 | Thale cress | cytosol | 22.23 | 22.89 |
| Solyc07g053010.1.1 | Tomato | cytosol | 22.12 | 22.07 |
| PGSC0003DMT400067280 | Potato | cytosol, mitochondrion | 22.12 | 21.97 |
| TraesCS7B01G491900.1 | Wheat | mitochondrion | 4.9 | 21.39 |
| Zm00001d035129_P001 | Maize | plasma membrane | 24.74 | 20.55 |
| TraesCS1D01G149200.1 | Wheat | cytosol | 32.27 | 20.45 |
| TraesCS1A01G152300.1 | Wheat | cytosol | 32.16 | 20.38 |
| Zm00001d035125_P001 | Maize | cytosol, mitochondrion, plasma membrane | 28.85 | 20.0 |
| HORVU1Hr1G040540.18 | Barley | mitochondrion | 33.07 | 19.19 |
| Zm00001d032724_P001 | Maize | cytosol, endoplasmic reticulum, mitochondrion, plastid | 32.61 | 19.16 |
| KXG38346 | Sorghum | nucleus | 32.38 | 18.64 |
| CDX73766 | Canola | plastid | 22.12 | 15.03 |
| Bra036845.1-P | Field mustard | plastid | 22.12 | 15.03 |
| TraesCS6B01G070000.1 | Wheat | cytosol | 2.28 | 4.46 |
Protein Annotations
| Gene3D:1.10.8.430 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0043531 | EnsemblPlantsGene:GSMUA_Achr3G27810_001 | EnsemblPlants:GSMUA_Achr3P27810_001 | EnsemblPlants:GSMUA_Achr3T27810_001 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | UniProt:M0SIE6 | InterPro:NB-ARC |
| InterPro:P-loop_NTPase | PFAM:PF00931 | PFAM:PF13855 | PRINTS:PR00364 | PANTHER:PTHR44518 | SUPFAM:SSF52058 |
| SUPFAM:SSF52540 | UniParc:UPI0002953675 | SEG:seg | : | : | : |
Description
Putative disease resistance protein RGA1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G27810_001]
Coordinates
chr3:+:27296707..27299340
Molecular Weight (calculated)
98627.1 Da
IEP (calculated)
6.720
GRAVY (calculated)
-0.172
Length
877 amino acids
Sequence
(BLAST)
(BLAST)
001: QDPSKNVVVL ATVGIGGIGK TTLAQKVFND GKIKASFRTT IWVCVSQEYS ETDLLRNIVK GAGGSHGGEQ SRSLLEPLVE GLLRGNKFLL VLDDVWDAQI
101: WDDLLRNPLQ GGAAGSRVLV TTRNAAIARQ MKAAHVHEMK LLPPEDGWSL LCKKATMNAE EERDAQDLKD TGLKIVEKCG GLPLAIKTIG GVLRDRGLNR
201: SAWEDVLRSA AWSRTGLPEG MHGALYLSYQ DLPSHLKQCF LYCALFREDF DFERPEIVIL WIAEGFVEAR GDVSLEETGE QYYIELHHRC LLQSLQPFSL
301: DYHNYSKMHD LLRSLSHFLS RDDSLCISDV QNEWRSGAAS MKLRRLSIVA TETTDIQHIV SLIKQHESVR TLLVRGYAKD IDDYLKNFVR LRVLHLMGRN
401: IQSLPHYMGN LIHLRYLTVS HSHITELPES ICNLTNLQFL ILFGCRRLTQ IPQGIVRLVN LRALDCKGTR LESFPYGIKR LKHLNELQGF VVNTGIGMCP
501: LEALCGLKEL RDLSIHRLER AWLEAEPGRD TSVLKGNQKL KKLLLSCSFT SDGHTEEQIE RIEKVLDVAL HPPSSVVSLS LHNLFGRRYP SWMASASISS
601: LLPNIRHLEL IDCYDWPLLP PLGKLPSLEF LVIRGARAVT TIGPEFFGCE AAAATGNDRE RNSKRPSSSY PTSPSLFPKL RQLELRKMTN MEVWDWVAEG
701: FAMRRLDKLD LVNCPTLKSL PEGLIRQATC LTTLNLRDVC ALKSIRGFPS VKELSISGES DLEIVTDLPA LEVLELGEFL LPNNHLPEWL ADCPACFTIL
801: QRLDVHGTTQ LLRRCLQNGA YWPMIKHFPN FSIKDDRGNY INYIKHSGTF ETNLDDAAAF AAAAAEEEEE GEDINEL
101: WDDLLRNPLQ GGAAGSRVLV TTRNAAIARQ MKAAHVHEMK LLPPEDGWSL LCKKATMNAE EERDAQDLKD TGLKIVEKCG GLPLAIKTIG GVLRDRGLNR
201: SAWEDVLRSA AWSRTGLPEG MHGALYLSYQ DLPSHLKQCF LYCALFREDF DFERPEIVIL WIAEGFVEAR GDVSLEETGE QYYIELHHRC LLQSLQPFSL
301: DYHNYSKMHD LLRSLSHFLS RDDSLCISDV QNEWRSGAAS MKLRRLSIVA TETTDIQHIV SLIKQHESVR TLLVRGYAKD IDDYLKNFVR LRVLHLMGRN
401: IQSLPHYMGN LIHLRYLTVS HSHITELPES ICNLTNLQFL ILFGCRRLTQ IPQGIVRLVN LRALDCKGTR LESFPYGIKR LKHLNELQGF VVNTGIGMCP
501: LEALCGLKEL RDLSIHRLER AWLEAEPGRD TSVLKGNQKL KKLLLSCSFT SDGHTEEQIE RIEKVLDVAL HPPSSVVSLS LHNLFGRRYP SWMASASISS
601: LLPNIRHLEL IDCYDWPLLP PLGKLPSLEF LVIRGARAVT TIGPEFFGCE AAAATGNDRE RNSKRPSSSY PTSPSLFPKL RQLELRKMTN MEVWDWVAEG
701: FAMRRLDKLD LVNCPTLKSL PEGLIRQATC LTTLNLRDVC ALKSIRGFPS VKELSISGES DLEIVTDLPA LEVLELGEFL LPNNHLPEWL ADCPACFTIL
801: QRLDVHGTTQ LLRRCLQNGA YWPMIKHFPN FSIKDDRGNY INYIKHSGTF ETNLDDAAAF AAAAAEEEEE GEDINEL
0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
Arabidopsis Description
Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.