Factsheet for GSMUA_Achr10P07140_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	78.48	90.82
GSMUA_Achr10P...	Banana	cytosol	89.35	77.04
GSMUA_Achr10P...	Banana	cytosol	87.39	74.79
GSMUA_Achr10P...	Banana	cytosol	68.04	59.0
GSMUA_Achr10P...	Banana	cytosol	65.76	57.29
GSMUA_Achr11P...	Banana	cytosol	58.48	52.03
GSMUA_Achr1P12540_001	Banana	cytosol	31.63	48.74
GSMUA_Achr10P...	Banana	cytosol	17.93	47.01
GSMUA_Achr2P03610_001	Banana	cytosol	51.41	45.88
GSMUA_AchrUn_...	Banana	cytosol	28.26	44.67
GSMUA_Achr9P20610_001	Banana	cytosol	50.54	43.7
GSMUA_Achr1P12550_001	Banana	cytosol	50.11	43.45
GSMUA_Achr1P14030_001	Banana	cytosol	42.61	37.16
GSMUA_Achr1P14020_001	Banana	cytosol	41.2	36.76
GSMUA_AchrUn_...	Banana	cytosol	10.33	36.68
Zm00001d014876_P005	Maize	cytosol	42.17	36.16
GSMUA_Achr2P11320_001	Banana	cytosol	40.0	36.11
KXG20980	Sorghum	cytosol	41.74	35.82
TraesCS7A01G557700.2	Wheat	cytosol	41.41	34.92
TraesCS7D01G552700.1	Wheat	cytosol	41.41	34.89
TraesCS7B01G482300.1	Wheat	cytosol, plastid	41.3	34.73
Os02t0456800-01	Rice	cytosol	41.09	34.71
HORVU7Hr1G120540.3	Barley	cytosol	40.98	34.09
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane	29.13	33.75
GSMUA_Achr3P27817_001	Banana	cytosol	10.43	33.22
GSMUA_Achr9P23050_001	Banana	cytosol	38.26	32.38
GSMUA_Achr3P27810_001	Banana	cytosol, endoplasmic reticulum	30.76	32.27
GSMUA_AchrUn_...	Banana	cytosol	23.8	31.83
GSMUA_Achr3P27790_001	Banana	cytosol	31.3	31.79
GSMUA_Achr3P28030_001	Banana	plasma membrane	37.17	31.67
GSMUA_AchrUn_...	Banana	cytosol	21.41	31.22
GSMUA_AchrUn_...	Banana	cytosol	19.57	31.09
GSMUA_Achr3P27830_001	Banana	cytosol, peroxisome	26.85	30.84
GSMUA_AchrUn_...	Banana	cytosol	9.89	29.55
GSMUA_AchrUn_...	Banana	cytosol	22.61	28.85
PGSC0003DMT400079012	Potato	cytosol	4.67	27.39
PGSC0003DMT400009065	Potato	cytosol	24.02	26.06
VIT_04s0023g02380.t01	Wine grape	cytosol	23.91	25.88
Solyc07g053010.1.1	Tomato	cytosol	24.46	25.6
PGSC0003DMT400067280	Potato	cytosol, mitochondrion	24.46	25.48
Solyc07g053020.1.1	Tomato	cytosol	23.59	25.47
Solyc02g084890.1.1	Tomato	cytosol, extracellular, nucleus	23.48	25.41
PGSC0003DMT400067354	Potato	cytosol	23.91	25.14
AT3G50950.1	Thale cress	cytosol	22.5	24.3
GSMUA_AchrUn_...	Banana	plasma membrane	35.76	22.85
GSMUA_AchrUn_...	Banana	cytosol	7.83	21.24
CDX73766	Canola	plastid	23.15	16.5
Bra036845.1-P	Field mustard	plastid	23.15	16.5

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	MapMan:35.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0043531	EnsemblPlantsGene:GSMUA_Achr10G07140_001	EnsemblPlants:GSMUA_Achr10P07140_001	EnsemblPlants:GSMUA_Achr10T07140_001
InterPro:IPR001611	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M0RG41	InterPro:NB-ARC	InterPro:P-loop_NTPase
PFAM:PF00931	PFAM:PF13855	PRINTS:PR00364	PANTHER:PTHR44518	InterPro:RX-like_CC	SMART:SM00369
SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI000295A075	SEG:seg	:	:

Description

Putative disease resistance protein RGA1 [Source:GMGC_GENE;Acc:GSMUA_Achr10G07140_001]

Coordinates

chr10:+:17413247..17416087

Molecular Weight (calculated)

104078.0 Da

IEP (calculated)

5.181

GRAVY (calculated)

-0.189

Length

920 amino acids

Sequence
(BLAST)

001: MAMVLDTFVS RYVNDVAAFV EGEICKVLGV KKEIKALQET LETIRCFLQD AEQKSRSGDP VMELWVRKLK EVMYDADDVI DLCVMEGGKP LEVRASASAS
101: GVVSLPFSFV SSCFRCTKYR HEIAGQIEAI NDRLKRIAAD NSILGNLQPA SQQLHPKKPP PPRETSPLEV EEDIVGEQIE EAADDLINRM LENTEQKCRV
201: FGIVGMGGIG KTTLASKIYN DGRIKANFPI QMWLYISKDY TEIKLLRELI RCAGDETKAE SFEGESRAEL EPKLASLLTK NLFLVLDDVW SPNVWTDFLR
301: KPLSKGAGSS TILVTTRIET VLSGMKASYM HQAEKMDDNS GWLLLGKTVF EAGEEDDMRR LEEVGRKIVR KCDGLPLAIK AIAGVLISKD RSTAEWEQVL
401: ENDAWSRNRQ IDEEVPRALH LSYEDLPSHL KQCFLYCSFF TWKVFHYNDI IRFWVAEGLI VEAEGRLMED VAEEYYWELV SRNLLQVDPS YINRIMFCMH
501: DHLRALATYL MKDEGFSITV GQRLDIKANA KIRRLDSHST ITIEDNVLEG LPNLRVLDLC NTSVERIPNC IGDLLHLRYL DLDITNIHEI PESIGCLVNL
601: QTLNISGCKY LYKLPMTITR LYNLRSLVVE DTPLTHVPKG IGKLININIL QGFVIGHDNP TNEVDETGCG LEELQPLSKL RYLSIYRLER AVTAASALAE
701: KRSLRELILS WMPPEDGEDG DATDSGEDRR ATTWRKEEQI QMGAEKICNE LSPPSSLRTL IIVRFPGRQF PNWMMSSSLG ESLPNLQYLY LSVFPSCAEL
801: PPLGMLPLLK YLKIIGAKAV MAIGPEFLGH SFPGTCAFPK LEYLEINDMP NWEEWSLCGV EEGGHRTHLK LFPNLKECCL VDCPKLRALP EGLSHATNLK
901: ELHIWGAHNL REVTKLRLSY

Best Arabidopsis Sequence Match ( AT3G50950.1 )
(BLAST)

001: MVDAVVTVFL EKTLNILEEK GRTVSDYRKQ LEDLQSELKY MQSFLKDAER QKRTNETLRT LVADLRELVY EAEDILVDCQ LADGDDGNEQ RSSNAWLSRL
101: HPARVPLQYK KSKRLQEINE RITKIKSQVE PYFEFITPSN VGRDNGTDRW SSPVYDHTQV VGLEGDKRKI KEWLFRSNDS QLLIMAFVGM GGLGKTTIAQ
201: EVFNDKEIEH RFERRIWVSV SQTFTEEQIM RSILRNLGDA SVGDDIGTLL RKIQQYLLGK RYLIVMDDVW DKNLSWWDKI YQGLPRGQGG SVIVTTRSES
301: VAKRVQARDD KTHRPELLSP DNSWLLFCNV AFAANDGTCE RPELEDVGKE IVTKCKGLPL TIKAVGGLLL CKDHVYHEWR RIAEHFQDEL RGNTSETDNV
401: MSSLQLSYDE LPSHLKSCIL TLSLYPEDCV IPKQQLVHGW IGEGFVMWRN GRSATESGED CFSGLTNRCL IEVVDKTYSG TIITCKIHDM VRDLVIDIAK
501: KDSFSNPEGL NCRHLGISGN FDEKQIKVNH KLRGVVSTTK TGEVNKLNSD LAKKFTDCKY LRVLDISKSI FDAPLSEILD EIASLQHLAC LSLSNTHPLI
601: QFPRSMEDLH NLQILDASYC QNLKQLQPCI VLFKKLLVLD MTNCGSLECF PKGIGSLVKL EVLLGFKPAR SNNGCKLSEV KNLTNLRKLG LSLTRGDQIE
701: EEELDSLINL SKLMSISINC YDSYGDDLIT KIDALTPPHQ LHELSLQFYP GKSSPSWLSP HKLPMLRYMS ICSGNLVKMQ EPFWGNENTH WRIEGLMLSS
801: LSDLDMDWEV LQQSMPYLRT VTANWCPELE SFAIEDVGFR GGVWMKTPLH RT

Arabidopsis Description

RPP13L4Disease resistance RPP13-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q38834]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.