Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | cytosol | 63.02 | 82.99 |
| GSMUA_AchrUn_... | Banana | cytosol | 30.79 | 82.3 |
| GSMUA_AchrUn_... | Banana | cytosol | 23.51 | 82.24 |
| GSMUA_AchrUn_... | Banana | cytosol | 57.17 | 82.09 |
| GSMUA_Achr3P27810_001 | Banana | cytosol, endoplasmic reticulum | 79.03 | 81.64 |
| GSMUA_AchrUn_... | Banana | cytosol | 51.1 | 79.97 |
| GSMUA_Achr3P27830_001 | Banana | cytosol, peroxisome | 70.31 | 79.53 |
| GSMUA_Achr3P27817_001 | Banana | cytosol | 24.94 | 78.2 |
| GSMUA_AchrUn_... | Banana | cytosol | 24.06 | 70.78 |
| GSMUA_Achr3P28030_001 | Banana | plasma membrane | 82.56 | 69.26 |
| GSMUA_AchrUn_... | Banana | cytosol, plasma membrane | 59.82 | 68.26 |
| GSMUA_AchrUn_... | Banana | cytosol | 47.46 | 59.64 |
| GSMUA_Achr9P23050_001 | Banana | cytosol | 55.85 | 46.55 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 72.3 | 45.49 |
| GSMUA_Achr2P11320_001 | Banana | cytosol | 38.52 | 34.25 |
| GSMUA_Achr1P14020_001 | Banana | cytosol | 36.09 | 31.72 |
| GSMUA_Achr10P... | Banana | cytosol | 31.79 | 31.3 |
| GSMUA_Achr11P... | Banana | cytosol | 35.21 | 30.85 |
| GSMUA_Achr1P14030_001 | Banana | cytosol | 35.87 | 30.81 |
| TraesCS6B01G070200.1 | Wheat | cytosol | 30.46 | 30.23 |
| GSMUA_AchrUn_... | Banana | cytosol | 19.21 | 29.9 |
| GSMUA_Achr10P... | Banana | cytosol | 35.32 | 29.77 |
| GSMUA_Achr10P... | Banana | cytosol | 25.83 | 29.43 |
| GSMUA_Achr2P03610_001 | Banana | cytosol | 33.44 | 29.39 |
| GSMUA_Achr10P... | Banana | cytosol | 34.55 | 29.33 |
| TraesCS1B01G169700.1 | Wheat | cytosol | 30.13 | 29.29 |
| GSMUA_Achr9P20610_001 | Banana | cytosol | 33.77 | 28.76 |
| GSMUA_Achr10P... | Banana | cytosol | 33.44 | 28.69 |
| GSMUA_Achr1P12550_001 | Banana | cytosol | 33.55 | 28.65 |
| GSMUA_Achr1P12540_001 | Banana | cytosol | 18.87 | 28.64 |
| GSMUA_Achr10P... | Banana | cytosol | 33.44 | 28.56 |
| TraesCS5A01G181200.1 | Wheat | mitochondrion | 28.92 | 26.87 |
| TraesCS5B01G178900.1 | Wheat | cytosol | 28.59 | 26.62 |
| Zm00001d021491_P001 | Maize | cytosol, plasma membrane | 32.45 | 26.42 |
| EER97218 | Sorghum | mitochondrion, plasma membrane | 32.45 | 26.34 |
| GSMUA_Achr10P... | Banana | cytosol | 10.15 | 26.21 |
| PGSC0003DMT400079012 | Potato | cytosol | 4.53 | 26.11 |
| OQU89955 | Sorghum | cytosol | 31.02 | 26.07 |
| HORVU5Hr1G055260.1 | Barley | mitochondrion, plasma membrane | 15.89 | 25.85 |
| Zm00001d021492_P002 | Maize | cytosol | 30.79 | 25.81 |
| Os09t0313500-01 | Rice | plasma membrane | 31.13 | 25.75 |
| Os07t0481400-01 | Rice | cytosol | 30.24 | 25.37 |
| Solyc07g053020.1.1 | Tomato | cytosol | 23.73 | 25.23 |
| Os07t0481300-01 | Rice | cytosol | 31.13 | 25.13 |
| PGSC0003DMT400009065 | Potato | cytosol | 23.51 | 25.12 |
| Os09t0313600-00 | Rice | plasma membrane | 28.81 | 25.02 |
| TraesCS5D01G185600.1 | Wheat | cytosol | 28.92 | 25.0 |
| TraesCS5A01G181400.1 | Wheat | plastid | 29.8 | 24.91 |
| HORVU0Hr1G039660.8 | Barley | cytosol | 28.81 | 24.86 |
| TraesCS5D01G185700.1 | Wheat | plastid | 29.58 | 24.72 |
| TraesCS5B01G179100.1 | Wheat | plastid | 29.47 | 24.63 |
| Solyc02g084890.1.1 | Tomato | cytosol, extracellular, nucleus | 22.96 | 24.47 |
| PGSC0003DMT400067354 | Potato | cytosol | 23.51 | 24.34 |
| VIT_04s0023g02380.t01 | Wine grape | cytosol | 22.3 | 23.76 |
| AT3G50950.1 | Thale cress | cytosol | 22.19 | 23.59 |
| PGSC0003DMT400067280 | Potato | cytosol, mitochondrion | 22.41 | 22.99 |
| Solyc07g053010.1.1 | Tomato | cytosol | 22.3 | 22.98 |
| TraesCS7B01G491900.1 | Wheat | mitochondrion | 4.86 | 21.89 |
| Zm00001d035129_P001 | Maize | plasma membrane | 24.94 | 21.4 |
| Zm00001d035125_P001 | Maize | cytosol, mitochondrion, plasma membrane | 28.59 | 20.47 |
| TraesCS1D01G149200.1 | Wheat | cytosol | 30.46 | 19.94 |
| TraesCS1A01G152300.1 | Wheat | cytosol | 30.46 | 19.94 |
| HORVU1Hr1G040540.18 | Barley | mitochondrion | 32.56 | 19.52 |
| Zm00001d032724_P001 | Maize | cytosol, endoplasmic reticulum, mitochondrion, plastid | 31.46 | 19.09 |
| KXG38346 | Sorghum | nucleus | 31.68 | 18.83 |
| CDX73766 | Canola | plastid | 22.41 | 15.72 |
| Bra036845.1-P | Field mustard | plastid | 22.41 | 15.72 |
| TraesCS6B01G070000.1 | Wheat | cytosol | 1.99 | 4.02 |
Protein Annotations
| Gene3D:1.10.8.430 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0043531 | EnsemblPlantsGene:GSMUA_Achr3G27790_001 | EnsemblPlants:GSMUA_Achr3P27790_001 | EnsemblPlants:GSMUA_Achr3T27790_001 |
| InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt_typical-subtyp | UniProt:M0SIE5 | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR44518 | SMART:SM00369 | SUPFAM:SSF52058 | SUPFAM:SSF52540 |
| UniParc:UPI000295342A | SEG:seg | : | : | : | : |
Description
Putative Disease resistance protein RGA2 [Source:GMGC_GENE;Acc:GSMUA_Achr3G27790_001]
Coordinates
chr3:+:27283880..27286600
Molecular Weight (calculated)
102270.0 Da
IEP (calculated)
6.273
GRAVY (calculated)
-0.178
Length
906 amino acids
Sequence
(BLAST)
(BLAST)
001: MESDMVGQRL EEDSKALVEQ LTKQDPSKNV VVLAIVGIGG IGKTTFAQKV FNDGKIKASF RTTIWVCVSQ EFSETDLLRN IIEGAGGKYK REQSRSQLEP
101: TVERLLRGNK FLLVLDDVWD AQIWDDLLRN PLQGGAAGSR VLVTTRNAGI ARQMKAAHFH EMKLLPPEDG WSLLCKKATM NAEEERDAQD LKDTGMKIVE
201: KCGGLPLAIK TIGGVLCTRG LNRDAWEEVL RSAAWSRTRL PEGVHGALNL SYQDLPAHLK QCFLYCALFP EDYVFRGSAI VRLWIAEGFV EARGDVSLEE
301: AGEQYHRELL HRSLLQSLQP FSLDSDEYSK MHDLLRSLVH FLSRDESLFI SDVQNEWRSA AATMKLRRLS IVATETMDIR DIVSWTRQNE SVRTLLLEGI
401: RGSVKDIDDS LKNLVRLRVL HLTYTNIDIL PHYIGNLIHL RYLNVSHSHV TELPESICNL TNLQFLLLKG CDQLRHIPRG IARLFNLRTL DCTYTQLESL
501: PCGIGRLKHL NKLRGFVVNT GNDGMCPLEA LYGLQELRYL SVGRLERAWL EAEPKRVTSI LKGNHKLKNL YLHCSSTLTS DGHTEEEIER MEKVLDVALH
601: PPSSVVLLSL LNFGLRYPSW MASASISSLL PNISRLELNY CVHWPLLPPL GKLPSLEFLE IVGARAVTTI GPEFFGCEVA AAGHERERNS KRSSSSTSPP
701: SLFPKLRQLE LLDMTNMEVW DWVAEGFAMR RLDKLVLGNC PKLKSLPEGL IRQATCLTTL FLADVCALKS IRGFPCVKEM SIIGESDLEI VADLPALEVL
801: NLGLFGRRNN HLPDWLAQQS FTTLRRLDVR GTTQILRRCL QNGADWPMIE RFPIFSIRDF RGNYINYIKH SCTFDTNLVD DDAAFAAVAA AEEEEEEEEE
901: EDVNEL
101: TVERLLRGNK FLLVLDDVWD AQIWDDLLRN PLQGGAAGSR VLVTTRNAGI ARQMKAAHFH EMKLLPPEDG WSLLCKKATM NAEEERDAQD LKDTGMKIVE
201: KCGGLPLAIK TIGGVLCTRG LNRDAWEEVL RSAAWSRTRL PEGVHGALNL SYQDLPAHLK QCFLYCALFP EDYVFRGSAI VRLWIAEGFV EARGDVSLEE
301: AGEQYHRELL HRSLLQSLQP FSLDSDEYSK MHDLLRSLVH FLSRDESLFI SDVQNEWRSA AATMKLRRLS IVATETMDIR DIVSWTRQNE SVRTLLLEGI
401: RGSVKDIDDS LKNLVRLRVL HLTYTNIDIL PHYIGNLIHL RYLNVSHSHV TELPESICNL TNLQFLLLKG CDQLRHIPRG IARLFNLRTL DCTYTQLESL
501: PCGIGRLKHL NKLRGFVVNT GNDGMCPLEA LYGLQELRYL SVGRLERAWL EAEPKRVTSI LKGNHKLKNL YLHCSSTLTS DGHTEEEIER MEKVLDVALH
601: PPSSVVLLSL LNFGLRYPSW MASASISSLL PNISRLELNY CVHWPLLPPL GKLPSLEFLE IVGARAVTTI GPEFFGCEVA AAGHERERNS KRSSSSTSPP
701: SLFPKLRQLE LLDMTNMEVW DWVAEGFAMR RLDKLVLGNC PKLKSLPEGL IRQATCLTTL FLADVCALKS IRGFPCVKEM SIIGESDLEI VADLPALEVL
801: NLGLFGRRNN HLPDWLAQQS FTTLRRLDVR GTTQILRRCL QNGADWPMIE RFPIFSIRDF RGNYINYIKH SCTFDTNLVD DDAAFAAVAA AEEEEEEEEE
901: EDVNEL
0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
Arabidopsis Description
Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.