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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d021492_P002 Maize cytosol 87.11 86.86
Os07t0481400-01 Rice cytosol 69.85 69.72
GSMUA_AchrUn_... Banana cytosol 8.07 33.59
GSMUA_AchrUn_... Banana cytosol 18.74 32.01
GSMUA_AchrUn_... Banana cytosol 20.13 31.54
GSMUA_Achr3P27830_001 Banana cytosol, peroxisome 23.38 31.46
GSMUA_AchrUn_... Banana cytosol, plasma membrane 23.1 31.36
GSMUA_AchrUn_... Banana cytosol 16.79 31.26
GSMUA_Achr3P27790_001 Banana cytosol 26.07 31.02
GSMUA_Achr3P27810_001 Banana cytosol, endoplasmic reticulum 25.23 31.01
GSMUA_AchrUn_... Banana cytosol 20.22 30.24
GSMUA_Achr3P28030_001 Banana plasma membrane 29.78 29.72
EER97218 Sorghum mitochondrion, plasma membrane 30.61 29.57
GSMUA_Achr9P23050_001 Banana cytosol 29.78 29.53
GSMUA_Achr3P27817_001 Banana cytosol 7.88 29.41
GSMUA_AchrUn_... Banana cytosol 8.35 29.22
OQU84002 Sorghum cytosol 16.98 29.09
OQU82964 Sorghum cytosol 23.47 28.24
KXG20980 Sorghum cytosol 28.01 28.17
KXG29105 Sorghum cytosol 26.62 28.16
OQU80132 Sorghum cytosol 25.42 27.99
GSMUA_AchrUn_... Banana cytosol 8.63 27.43
EER93136 Sorghum extracellular, plasma membrane 27.92 27.36
VIT_04s0023g02380.t01 Wine grape cytosol 21.43 27.18
KXG39005 Sorghum cytosol 25.88 26.85
EER91059 Sorghum cytosol 27.37 26.84
EES08064 Sorghum cytosol 25.32 26.74
KXG27846 Sorghum cytosol 25.88 26.52
KXG27854 Sorghum cytosol 25.05 26.39
KXG27860 Sorghum cytosol 25.14 26.13
Solyc02g084890.1.1 Tomato cytosol, extracellular, nucleus 20.41 25.88
OQU84098 Sorghum cytosol 24.95 25.84
PGSC0003DMT400009065 Potato cytosol 20.32 25.83
KXG27844 Sorghum cytosol 26.72 25.13
OQU82958 Sorghum cytosol 26.53 24.96
KXG27853 Sorghum cytosol 26.44 24.83
AT3G50950.1 Thale cress cytosol 19.57 24.77
PGSC0003DMT400067354 Potato cytosol 19.67 24.23
PGSC0003DMT400079012 Potato cytosol 3.43 23.57
PGSC0003DMT400067280 Potato cytosol, mitochondrion 19.3 23.56
Solyc07g053020.1.1 Tomato cytosol 18.46 23.36
Solyc07g053010.1.1 Tomato cytosol 18.74 22.98
GSMUA_AchrUn_... Banana plasma membrane 26.72 20.0
KXG38346 Sorghum nucleus 28.11 19.88
CDX73766 Canola plastid 19.67 16.42
Bra036845.1-P Field mustard plastid 19.67 16.42
Protein Annotations
Gene3D:3.40.50.300Gene3D:3.80.10.10MapMan:35.1UniProt:A0A1B6QE86InterPro:AAA+_ATPaseGO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0043531InterPro:IPR032675ProteinID:KXG36225.1ProteinID:KXG36226.1
ProteinID:KXG36227.1InterPro:LRR_dom_sfInterPro:NB-ARCEnsemblPlants:OQU89955ProteinID:OQU89955ProteinID:OQU89955.1
InterPro:P-loop_NTPasePFAM:PF00931PRINTS:PR00364PANTHER:PTHR23155PANTHER:PTHR23155:SF687InterPro:RX-like_CC
SMART:SM00382EnsemblPlantsGene:SORBI_3002G303100SUPFAM:SSF52058SUPFAM:SSF52540UniParc:UPI00081ACF35SEG:seg
Description
hypothetical protein
Coordinates
chr2:-:67904965..67911541
Molecular Weight (calculated)
122775.0 Da
IEP (calculated)
7.097
GRAVY (calculated)
-0.275
Length
1078 amino acids
Sequence
(BLAST)
0001: MMEMILSEFT KQVIISLGNL ATNEIAKVLC IRNEINKLSR KLESMGAIIT DAEQTVVQNE TTRDWLKRSR EIIYEAENII DRCRIEKERF QTSQPQECNP
0101: SSVFKCCRDV GIDYIVASDI HELNQKLDSI IEEGKRLHVE PAIENQIRLD QTRSDLDFAP DLEPDIVGRE VENDCENLIE LLIKRDDIPS RPNRPLFAII
0201: GTIGVGKTTL ARKVYHKTET FFEPRVWVHV SQDLQHMTMW SGERFSKGDT ARQQAELRTW LQGKKFLLVI DDVWGENVWD GLLEIQAQHG SPGSRVLITT
0301: RNERVARRMG AVHLHHVKGL NEDDGWWLLR TRAFLYESTG NMQDIGRRIV QKCNGLPMAI RRIGCHLREV DLKEDDWERI CSSDFCGLSS RIRNAINTSY
0401: LELPYYLKRC FLYCSLYPEG SVIDRQCITQ QWIAEGFIVT QQNTTVEEEA KKCYEELLGR GLLLPENQTY GGERSKMPHL FRSFALLQSQ DEYFIGNPQD
0501: IGDALRPCRL TITTGGAEAI RNGIRKLKSL RTIILRGSPL NDRTLGDIFQ KCTHLRVLDL GDTQIECVAR SLGSMMHLRY LSFANTQVRE IPSAIENLRM
0601: LQFLILKNCT CLNALPESLG RLTNLRTLDI SGSGLNQVKF GFSMMKELKC LHGFLVSSRG SENRNGWSFQ ELGSLYKLTS LKILRLERTL TREDAIQSAL
0701: EAKHHLKELE LCCSTDDETT EISRAAKIKD VFEALKPGPS IVSLKLENYY GHGFPSWLDP FHLGELKQLT LDGCLHCQYL PSLGQMKNLK FLAINGSHLS
0801: THIGHEIRGT PDDGVAFPKL EQLVISKMSN LKSWQGLGKR DMPLLMNFRI IGCPKIDSLP SWLKHCMALR SLHIDHADNL EAIENIPALK KLEVCENSKL
0901: KVISNLRRLE DLKVVACSLL DVVQDVPSLR TVHSYERNST KLPQWLQPEK PFMLRRLEIV GTEELLDSCS SATAPYWPII QNADHVYAHL PDGSFYFSYA
1001: KSSSYFHKSA RNLARSSLLS SASFIVPILP QAEEIVSTDE IRNISEPTGQ SSSQSWMRIL FTVLLFVAAH IFSLSSEY
Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)
0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
Arabidopsis Description
Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.