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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os08t0332600-00 Rice cytosol 50.77 61.51
KXG39005 Sorghum cytosol 34.32 32.34
KXG29105 Sorghum cytosol 33.4 32.09
OQU84002 Sorghum cytosol 20.43 31.8
KXG20980 Sorghum cytosol 32.07 29.29
KXG27846 Sorghum cytosol 31.05 28.9
OQU84098 Sorghum cytosol 29.72 27.95
OQU82964 Sorghum cytosol 25.33 27.68
EER91059 Sorghum cytosol 30.13 26.84
KXG27844 Sorghum cytosol 31.36 26.79
EES08064 Sorghum cytosol 27.37 26.25
KXG27860 Sorghum cytosol 27.78 26.23
KXG27854 Sorghum cytosol 27.17 26.0
OQU82958 Sorghum cytosol 30.13 25.74
EER93136 Sorghum extracellular, plasma membrane 28.91 25.73
KXG27853 Sorghum cytosol 29.93 25.52
OQU89955 Sorghum cytosol 27.99 25.42
EER97218 Sorghum mitochondrion, plasma membrane 26.86 23.57
Solyc07g053020.1.1 Tomato cytosol 20.02 23.0
PGSC0003DMT400009065 Potato cytosol 19.92 23.0
PGSC0003DMT400067354 Potato cytosol 20.12 22.51
Solyc02g084890.1.1 Tomato cytosol, extracellular, nucleus 19.51 22.47
VIT_04s0023g02380.t01 Wine grape cytosol 19.51 22.47
AT3G50950.1 Thale cress cytosol 19.41 22.3
Solyc07g053010.1.1 Tomato cytosol 20.02 22.3
PGSC0003DMT400067280 Potato cytosol, mitochondrion 19.71 21.86
PGSC0003DMT400079012 Potato cytosol 3.47 21.66
KXG38346 Sorghum nucleus 28.4 18.24
CDX73766 Canola plastid 19.71 14.95
Bra036845.1-P Field mustard plastid 19.71 14.95
Protein Annotations
Gene3D:1.10.8.430Gene3D:3.40.50.300Gene3D:3.80.10.10MapMan:35.1UniProt:A0A1Z5R8P7GO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0043531InterPro:IPR001611InterPro:IPR032675
InterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:NB-ARCEnsemblPlants:OQU80132ProteinID:OQU80132ProteinID:OQU80132.1
InterPro:P-loop_NTPasePFAM:PF00931PRINTS:PR00364PFscan:PS51450PANTHER:PTHR23155PANTHER:PTHR23155:SF517
InterPro:RX-like_CCEnsemblPlantsGene:SORBI_3007G085400SUPFAM:SSF52058SUPFAM:SSF52540UniParc:UPI000B8B9A7BSEG:seg
Description
hypothetical protein
Coordinates
chr7:-:10795556..10798528
Molecular Weight (calculated)
111208.0 Da
IEP (calculated)
7.553
GRAVY (calculated)
-0.154
Length
979 amino acids
Sequence
(BLAST)
001: MGSVLFSLSS KCLDKLAVLL EEEIMMTLSV RKEIRKLHDY LKYFDSIHED ADARAMEHRE MTGIWWGDVK DVMYDVDDII DLLRAHSQKQ RCCDLRMLSR
101: FAQLQFDHMI ARKIKGVNER LVEIQKNRDM FLPPGLYPQA QAPQTNGVDS RHLAASVDEI HVVGAEIKEA TDSMVEMIVG YGHQSRISVY GIVGMGGIGK
201: TTLAQKIYND RRIRERFHQV LIWLSISQSI AENDLLKEAI EKAGGQCNQH KSKDQLVQIL LHSISGKSVF LVLDNVTNPD VWIDLLRSPM ERCLDAHVLV
301: TTRSGHVLSQ MNAVHVKEMH RLKDADGLEL LMKRSFRTKD EVNVFSDIGA KIVKKCDGLP LAIKVIGGVL SSRSSKEEWE RILERRWSID GLPEELEGAL
401: YLSYSDLHPQ LKQCFLCCAL LPQNFDIHRD VTYWWIAEGF VKEEGSGPIH NIAEDYYHEL IKRNLLQARP EYVDKGVSTM HDLLRQLGQF LKRNEAIFMN
501: EKRVGSAVDE IPSIEEKKRL RCLIVLHHDT CRSVKRDIFR KLVHLRILVL RGAGLESIPA SVGYLALLRL LDLSYNEIKE LPGSIGNLTS LGCLSVFGCT
601: KLAALPTSLM RLTTISFLKI GNTGLAQVPK GIENFKQMDN LRSVFQNGTD GFRLDELRAL SMIRRLWVIR LETAIPPTEP ILCDKGYLKE LGLRCTMGKE
701: ANCRTHYPDS KVKRIEEIYE SFCPPPSLSY VFIDGFPGCM FPTWLSSEPQ NKLPNLAHMH FNDCISCPKL PPAGQLPFLQ VLHVKGADAV VNIGAELLGN
801: SIPSGTHTTA FPKLELLEIL DMYNWQNWSL SMDTLFEKTQ QQSLMPCLTR LRLINCPKLR ALPDHLHRVV NLQRIQIEGA DSLQEIVNHP GVVWLKVKNN
901: KSLRNISNLP KLRLLLAQDC QELQQAENLS SLKALYVVDC PMEQILWKCF PIEQQSTIVR VVTTGAHGQD IYPLESVFH
Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)
0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
Arabidopsis Description
Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.