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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G590700.1 Wheat extracellular 21.38 62.01
TraesCSU01G245300.1 Wheat extracellular 21.29 61.74
TraesCS3B01G590600.1 Wheat endoplasmic reticulum, plasma membrane 57.23 58.4
TraesCS3B01G590800.1 Wheat plasma membrane 56.96 58.12
Os03t0689866-00 Rice extracellular 9.28 57.95
TraesCS3D01G528100.2 Wheat plasma membrane 57.14 56.53
EER93136 Sorghum extracellular, plasma membrane 56.32 56.27
TraesCSU01G170200.1 Wheat cytosol 37.03 55.3
TraesCSU01G239600.1 Wheat cytosol 22.02 54.14
Os03t0689833-00 Rice cytosol 12.74 53.23
OQU82964 Sorghum cytosol 34.12 41.85
KXG27846 Sorghum cytosol 39.67 41.44
KXG27860 Sorghum cytosol 38.49 40.79
KXG27854 Sorghum cytosol 37.4 40.18
EES08064 Sorghum cytosol 37.22 40.06
OQU84098 Sorghum cytosol 37.94 40.06
OQU82958 Sorghum cytosol 40.31 38.66
KXG27844 Sorghum cytosol 40.31 38.66
KXG27853 Sorghum cytosol 39.58 37.89
KXG20980 Sorghum cytosol 31.3 32.09
KXG39005 Sorghum cytosol 29.66 31.38
KXG29105 Sorghum cytosol 28.94 31.21
OQU80132 Sorghum cytosol 26.84 30.13
OQU84002 Sorghum cytosol 17.2 30.05
OQU89955 Sorghum cytosol 26.84 27.37
EER97218 Sorghum mitochondrion, plasma membrane 26.84 26.43
KXG38346 Sorghum nucleus 26.66 19.23
Protein Annotations
Gene3D:3.40.50.300Gene3D:3.80.10.10MapMan:35.1UniProt:C5WPI2ncoils:CoilEnsemblPlants:EER91059
ProteinID:EER91059ProteinID:EER91059.2GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0043531
InterPro:IPR032675InterPro:LRR_dom_sfInterPro:Leu-rich_rpt_typical-subtypInterPro:NB-ARCInterPro:P-loop_NTPasePFAM:PF00931
PRINTS:PR00364PANTHER:PTHR23155PANTHER:PTHR23155:SF872InterPro:RX-like_CCSMART:SM00369EnsemblPlantsGene:SORBI_3001G132300
SUPFAM:SSF52058SUPFAM:SSF52540UniParc:UPI00081AB775:::
Description
hypothetical protein
Coordinates
chr1:+:10403556..10408840
Molecular Weight (calculated)
123721.0 Da
IEP (calculated)
6.167
GRAVY (calculated)
-0.222
Length
1099 amino acids
Sequence
(BLAST)
0001: MAAVLDAFAS KLADILVGMA KEKVELLLGV PGEITKLETT LGDLSRILAD AERRRIRDSA TDGWVRELKD VMYDADDILD LCQIMEGGEE EDPSSSVSAP
0101: KTKSTSGCWN WNIPKMFFCL RNPVVVHEIG KKIQALNQRL EDLEKRSSRF GFITQAINSS DYPVNNASNL LSEKTSSLIV PSDVVGDKIM EDTKEIVDLL
0201: IKKVDTPAKS KSNNVVVAVA ITGMGGIGKT TLARMVFNDN KIEENFEDRI WLSVNQEVNE ISVLQSVLAS FGANQNHEGF AGNKDLLERA LMKMVEQKKK
0301: FLLVMDDVWG EKVWNDLLRV PLSYGAPGSR VLVTTRNDEV ARGINAQHLH RVDKLQTEDA WVLLKNQVVL NESDDGYVNE LKGIGIKIVE NCDCLPLAVK
0401: VLGGVLRRKS KTRDTWTDIC NYTWPAEGID RDIDRAVYLS YEDLPSHLKQ CFLYCSLFPK DELIRLGDIV RLWIAQGYIQ DKITSKTLED LGEDYYKELL
0501: SRNLLDPDKR SYGQTACTMH DVIRSCAQSI IKDEGVLISG SQDVSRTLIS TTKLRHLSIS NKTVMIDTLQ KQVSLRTLML FGSTMVELKD LLSHLSCLRV
0601: LSLDNVNLVE LPDSICHLKH LRNLCLSGTS ISTIPRDIGD LKFLEDIDLF GCRNVSRLPN SILKLQKLNS LNLIGTTITS IPCGFHKLKD LVNLCGFPTD
0701: SNDSTDGWCS LEELGPLSKL KQLNIKNLEK APSGSMAAKA MLSNKHHLIS LDLIFTSRLG ENWVLKDDIS EEEHERIGEV LANLCPPTCI ENLEIRGYFA
0801: RGLPQWMRAM SAFGSLSRFV LKDYACCMQL PNGLGQLPFL DHFWIERAPS IQGIGHDLLL PSHSLLGDDG DGASVQIGEQ NKRRQPHHIS HGTGAAFPKL
0901: RNLGFIGMFE WTEWEWEQHV VAMPVLESLR VQHCKLQCFP IGLAHHASQL RYLTLQNISH LVSIENFPSL VKLWSYNNPR LERISNNKNL EWIDISSCPA
1001: LKELDRLPSL QSLEWWDLRA KALPQYLQKT KLNKLHVDCS PSLLKLIALQ DDSSEWGKIK HVQELKAYGR ASTEDEVDRH IYYTKEPYSF DVYLGESTD
Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)
0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
Arabidopsis Description
Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.