Factsheet for TraesCSU01G170200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G239600.1	Wheat	cytosol	58.7	96.64
TraesCS3B01G590600.1	Wheat	endoplasmic reticulum, plasma membrane	97.42	66.57
TraesCS3B01G590800.1	Wheat	plasma membrane	97.15	66.39
Os03t0689866-00	Rice	extracellular	13.18	55.11
Os03t0689833-00	Rice	cytosol	17.39	48.67
EER91059	Sorghum	cytosol	55.3	37.03
EER93136	Sorghum	extracellular, plasma membrane	53.53	35.82
TraesCSU01G060800.1	Wheat	cytosol	21.2	35.21
TraesCSU01G138600.1	Wheat	cytosol	25.54	29.89
TraesCSU01G112200.1	Wheat	cytosol	36.01	26.01
TraesCSU01G064600.1	Wheat	plasma membrane	37.36	25.92
TraesCSU01G060400.3	Wheat	cytosol	36.82	25.54
TraesCSU01G061700.1	Wheat	cytosol	36.82	24.64
TraesCSU01G111900.3	Wheat	cytosol	28.12	23.26
TraesCSU01G061600.1	Wheat	cytosol	3.53	22.22
TraesCSU01G111100.1	Wheat	cytosol	38.72	19.79
TraesCSU01G111000.1	Wheat	cytosol	38.32	19.78
TraesCSU01G112000.1	Wheat	cytosol, endoplasmic reticulum	37.77	19.62
TraesCSU01G111400.1	Wheat	cytosol	38.32	19.5
TraesCSU01G112400.2	Wheat	cytosol	38.04	18.86
TraesCSU01G110800.1	Wheat	cytosol	36.68	18.72
TraesCSU01G111600.1	Wheat	extracellular, plasma membrane	13.04	15.64
TraesCSU01G111500.2	Wheat	cytosol	6.25	10.11
TraesCSU01G245300.1	Wheat	extracellular	2.99	5.8
TraesCSU01G136900.1	Wheat	cytosol	0.82	2.82

Protein Annotations

EnsemblPlants:TraesCSU01G170200.1	EnsemblPlantsGene:TraesCSU01G170200	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt_typical-subtyp	InterPro:NB-ARC	InterPro:P-loop_NTPase
ncoils:Coil	PANTHER:PTHR23155	PANTHER:PTHR23155:SF872	PFAM:PF00931	SMART:SM00369	SUPFAM:SSF52058
SUPFAM:SSF52540	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:250292262..250295039

Molecular Weight (calculated)

82607.9 Da

IEP (calculated)

6.288

GRAVY (calculated)

-0.051

Length

736 amino acids

Sequence
(BLAST)

001: MAATCKSNEK VFAISTISSK DILSIHVVLN DNDESLVEGL KDIGMEIIER CDGLPLAVKV VGGLLLSKGK TRGDWLDVCS NVAWSMTTIS DDVNQAVYVS
101: YEELPQVLKQ CLLYCSLFPK DVLIKSADIV NMWIAEGFIH ITSMKQPEDL GAEYYKQLVS RNLLDPDYRF YDQKACTMHD VIRSFSQSVV KHEGLFVEEG
201: HNPSFTSGTS KLRHLSISKN VTEWDAFHKQ ASPRTLILFE SPRVDLKGFW NNLSLLRVLS LQGVNVVELP DSISNLRHLR YLGLAGTSIS GIPQGIGDLM
301: FMQFIELADC VKISHVPDSI LKLRKLRYIN FAGTNIASIP RGFGKLEDLV MISGFPTHSD DNTDQVWSSL EELGPLSRLT MLVIESLEKA SSGSVAARAK
401: LSSKAHLRIL NLGFTQNREV EEQNNGEQER IEEVLGNLCP PTCIEQLAII GYFGHKLPQW MRMVPVFTFL KRLELSSYAC YELPSGLGQL PSLDYFWVDQ
501: APFIKYIGHG LHMPSIGGRD IGLDKTLSGG AAVVAFPKLR KLGFQGILGL TEWEWEQQIP AMTTLEVLTI VNCQLKYLPP GLAHHANALR ELDLRNLSHL
601: VSIHNFPSLV ELRIVDNRTL ERIYNNPNLQ HIYIVSCPGL KVLEDLPSLQ SIEWVDVTAQ VLPDYLRHSK LEKLIVQCYI SLLKLISLQD ANSSESEWGK
701: IQHVHQLKAT GYISAEETRY ISYTKEPYSY KTDIGT

Best Arabidopsis Sequence Match ( AT3G14470.1 )
(BLAST)

0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD

Arabidopsis Description

RPPL1Putative disease resistance RPP13-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.