Factsheet for TraesCSU01G111500.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G010230.11	Barley	cytosol, plastid	74.29	61.23
TraesCSU01G245300.1	Wheat	extracellular	34.29	41.16
TraesCSU01G111900.3	Wheat	cytosol	72.75	37.19
TraesCSU01G136900.1	Wheat	cytosol	17.36	37.09
TraesCSU01G112200.1	Wheat	cytosol	71.43	31.89
TraesCS6B01G069500.1	Wheat	cytosol	96.04	30.75
OQU82964	Sorghum	cytosol	54.73	27.79
TraesCSU01G111100.1	Wheat	cytosol	82.42	26.04
TraesCSU01G111400.1	Wheat	cytosol	80.0	25.17
EES08064	Sorghum	cytosol	56.04	24.98
KXG27854	Sorghum	cytosol	55.38	24.63
Zm00001d024396_P001	Maize	plastid	58.02	24.6
KXG27860	Sorghum	cytosol	56.04	24.59
TraesCSU01G111000.1	Wheat	cytosol	75.38	24.05
TraesCSU01G112000.1	Wheat	cytosol, endoplasmic reticulum	74.73	23.99
KXG27846	Sorghum	cytosol	55.16	23.86
TraesCSU01G060400.3	Wheat	cytosol	55.6	23.85
TraesCSU01G110800.1	Wheat	cytosol	75.38	23.79
TraesCSU01G112400.2	Wheat	cytosol	76.48	23.43
KXG27853	Sorghum	cytosol	56.26	22.3
TraesCSU01G061700.1	Wheat	cytosol	53.85	22.27
KXG27844	Sorghum	cytosol	55.82	22.16
OQU82958	Sorghum	cytosol	55.38	21.99
TraesCSU01G064600.1	Wheat	plasma membrane	48.57	20.83
TraesCSU01G170200.1	Wheat	cytosol	10.11	6.25
HORVU6Hr1G010220.1	Barley	vacuole	12.53	5.36
TraesCSU01G111600.1	Wheat	extracellular, plasma membrane	2.42	1.79
TraesCSU01G138600.1	Wheat	cytosol	2.42	1.75
TraesCSU01G061600.1	Wheat	cytosol	0.44	1.71
TraesCSU01G060800.1	Wheat	cytosol	0.44	0.45
TraesCSU01G239600.1	Wheat	cytosol	0.22	0.22

Protein Annotations

EnsemblPlants:TraesCSU01G111500.2	EnsemblPlantsGene:TraesCSU01G111500	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	InterPro:RX-like_CC	PANTHER:PTHR44851	PANTHER:PTHR44851:SF2
PFAM:PF00931	PRINTS:PR00364	SEG:seg	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1

Description

No Description!

Coordinates

chrUn:+:95982996..95985818

Molecular Weight (calculated)

51336.2 Da

IEP (calculated)

6.754

GRAVY (calculated)

-0.257

Length

455 amino acids

Sequence
(BLAST)

001: MAMVLDAFAS YVLNMLTEMA REEVHMLLGF RREIDKMDIK LRDLKNFIAD ADRRNITDKS VQEWVGQLKR AMYEAADILD LCQLKAMERR SSTLDVGCFN
101: PLLFCMQNPS HAHDIGTRIK ALNKRLDTIK ERSAAFSFIN IGAYEDRSSK VHVTRSGNPN RETTGEFDRS GVVGEKIKED TRALVETMLA EKEGNTNIMV
201: VAIVGVGGIG KTTLAQNVIN DETMKAEFDN TIWLSINKDF DKVELLRTII TLAGGVHGGE KALVVLQSVL TTALKGKKLF LVLDDVWNHG AWGDVLKTPL
301: DNVVARGSRV LITTRDEKVA RGMKAELPYH HVDKLEEEDA WSLLKKQIVS SETNGHEIDM LKDIGLQIIA KCDGLPLTVK VMGGLLCQKD NKRRDWEMVL
401: DDSIWSVYGM PKELNHAVHL SYEDLPSWHQ TMLSMLLPSP KNCIVQKRQH NWHVD

Best Arabidopsis Sequence Match ( AT3G50950.1 )
(BLAST)

001: MVDAVVTVFL EKTLNILEEK GRTVSDYRKQ LEDLQSELKY MQSFLKDAER QKRTNETLRT LVADLRELVY EAEDILVDCQ LADGDDGNEQ RSSNAWLSRL
101: HPARVPLQYK KSKRLQEINE RITKIKSQVE PYFEFITPSN VGRDNGTDRW SSPVYDHTQV VGLEGDKRKI KEWLFRSNDS QLLIMAFVGM GGLGKTTIAQ
201: EVFNDKEIEH RFERRIWVSV SQTFTEEQIM RSILRNLGDA SVGDDIGTLL RKIQQYLLGK RYLIVMDDVW DKNLSWWDKI YQGLPRGQGG SVIVTTRSES
301: VAKRVQARDD KTHRPELLSP DNSWLLFCNV AFAANDGTCE RPELEDVGKE IVTKCKGLPL TIKAVGGLLL CKDHVYHEWR RIAEHFQDEL RGNTSETDNV
401: MSSLQLSYDE LPSHLKSCIL TLSLYPEDCV IPKQQLVHGW IGEGFVMWRN GRSATESGED CFSGLTNRCL IEVVDKTYSG TIITCKIHDM VRDLVIDIAK
501: KDSFSNPEGL NCRHLGISGN FDEKQIKVNH KLRGVVSTTK TGEVNKLNSD LAKKFTDCKY LRVLDISKSI FDAPLSEILD EIASLQHLAC LSLSNTHPLI
601: QFPRSMEDLH NLQILDASYC QNLKQLQPCI VLFKKLLVLD MTNCGSLECF PKGIGSLVKL EVLLGFKPAR SNNGCKLSEV KNLTNLRKLG LSLTRGDQIE
701: EEELDSLINL SKLMSISINC YDSYGDDLIT KIDALTPPHQ LHELSLQFYP GKSSPSWLSP HKLPMLRYMS ICSGNLVKMQ EPFWGNENTH WRIEGLMLSS
801: LSDLDMDWEV LQQSMPYLRT VTANWCPELE SFAIEDVGFR GGVWMKTPLH RT

Arabidopsis Description

RPP13L4Disease resistance RPP13-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q38834]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.