Factsheet for TraesCSU01G111600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

nucleus 1
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G010220.1	Barley	vacuole	73.13	42.24
TraesCSU01G061600.1	Wheat	cytosol	7.17	37.61
TraesCS6B01G069500.1	Wheat	cytosol	81.76	35.33
TraesCSU01G112000.1	Wheat	cytosol, endoplasmic reticulum	73.13	31.69
TraesCSU01G112400.2	Wheat	cytosol	73.78	30.51
TraesCSU01G111100.1	Wheat	cytosol	69.38	29.58
TraesCSU01G111000.1	Wheat	cytosol	68.57	29.52
TraesCSU01G060800.1	Wheat	cytosol	21.01	29.12
TraesCSU01G111400.1	Wheat	cytosol	66.45	28.22
TraesCSU01G110800.1	Wheat	cytosol	65.64	27.95
TraesCSU01G239600.1	Wheat	cytosol	16.12	22.15
TraesCSU01G112200.1	Wheat	cytosol	33.88	20.41
KXG27844	Sorghum	cytosol	27.69	14.83
OQU82958	Sorghum	cytosol	27.2	14.57
TraesCSU01G064600.1	Wheat	plasma membrane	24.92	14.42
KXG27853	Sorghum	cytosol	26.38	14.11
KXG27846	Sorghum	cytosol	23.29	13.59
Zm00001d024396_P001	Maize	plastid	22.96	13.14
TraesCSU01G170200.1	Wheat	cytosol	15.64	13.04
TraesCSU01G060400.3	Wheat	cytosol	21.17	12.25
TraesCSU01G061700.1	Wheat	cytosol	21.82	12.18
KXG27854	Sorghum	cytosol	18.24	10.95
EES08064	Sorghum	cytosol	18.08	10.87
KXG27860	Sorghum	cytosol	17.92	10.61
TraesCSU01G138600.1	Wheat	cytosol	10.75	10.49
TraesCSU01G111900.3	Wheat	cytosol	10.1	6.97
OQU82964	Sorghum	cytosol	10.1	6.92
TraesCSU01G111500.2	Wheat	cytosol	1.79	2.42
TraesCSU01G245300.1	Wheat	extracellular	0.33	0.53
TraesCSU01G136900.1	Wheat	cytosol	0.0	0.0
HORVU6Hr1G010230.11	Barley	cytosol, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCSU01G111600.1	EnsemblPlantsGene:TraesCSU01G111600	Gene3D:3.80.10.10	InterPro:HARBI1_dom	InterPro:IPR032675	InterPro:LRR_dom_sf
PANTHER:PTHR22930	PANTHER:PTHR22930:SF85	PFAM:PF13359	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:95986796..95989271

Molecular Weight (calculated)

70001.7 Da

IEP (calculated)

6.206

GRAVY (calculated)

-0.206

Length

614 amino acids

Sequence
(BLAST)

001: MSSSVVPLKS LRILMIADLA CCTQLPDGLC QLPYLESFQI NRAPAIKRIG PEFMQSYHHH SPCPSQMVAA FPRLHEMELI GMVEWEEWEW EEQVQAFPVL
101: QNLRLEQCKL KCLPPGLASH ARALNELIKL IVRGLLSCVG RAGGFVSVLF LDENLDLERI TNLPRLQKLT IEDCPKLKVL GGVPALQTLI LVDRDMETLP
201: VYMGDINPSY LELHCSLPLL ASIATGQSGP EWDKIGHVEH VKAYAREGDN PRKWYVLYTT NPYNLETNLS LSFMSRGTLT FLEDTQRFES VFKMTRKTFS
301: YICSLVMGPS MEDMNSCTFI DGRVLSLQDR VVVALRRLQC TEPTETIGSS VGVSESTVLL VTERFVAAVW QKADHHYRWP DSRQMDKIKS MFDKIHNMHN
401: CCGVICTIDI TFRPNCDHEK IQSTQLQVIV DPEMRFMDIW FGSAGRLSHL NRLYDSELFQ VCEKGAWLNG SKLKVALDEP EVGEYIIGDA GYPLLPWLLT
501: PYHEEDHSDY KAEFNRRHSA ATTCAMKAVA RLKDTWKYLQ GKMPSPVNIR ETIYACCMLH NIVIEMEDDT AMLSTKQKRN YCEEVRQLAN EDAVKARDML
601: SRHFMSSRPS ESGE

Best Arabidopsis Sequence Match ( AT3G55350.1 )
(BLAST)

001: MGPIKTIKKK KRAEKKVDRN VLLAATAAAT SASAAAALNN NDDDDDSSSQ SLDWWDGFSR RIYGGSTDPK TFESVFKISR KTFDYICSLV KADFTAKPAN
101: FSDSNGNPLS LNDRVAVALR RLGSGESLSV IGETFGMNQS TVSQITWRFV ESMEERAIHH LSWPSKLDEI KSKFEKISGL PNCCGAIDIT HIVMNLPAVE
201: PSNKVWLDGE KNFSMTLQAV VDPDMRFLDV IAGWPGSLND DVVLKNSGFY KLVEKGKRLN GEKLPLSERT ELREYIVGDS GFPLLPWLLT PYQGKPTSLP
301: QTEFNKRHSE ATKAAQMALS KLKDRWRIIN GVMWMPDRNR LPRIIFVCCL LHNIIIDMED QTLDDQPLSQ QHDMNYRQRS CKLADEASSV LRDELSDQLC
401: GKNSSA

Arabidopsis Description

Protein ALP1-like [Source:UniProtKB/Swiss-Prot;Acc:Q9M2U3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.