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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU82958 Sorghum cytosol 92.76 92.76
KXG27846 Sorghum cytosol 83.42 90.87
KXG27853 Sorghum cytosol 89.53 89.37
TraesCS6B01G070800.1 Wheat cytosol 12.04 65.4
HORVU6Hr1G010110.1 Barley cytosol 12.65 62.5
TraesCS6A01G051800.1 Wheat cytosol 11.61 62.15
TraesCS7B01G491500.1 Wheat cytosol 7.94 61.9
TraesCS7A01G566900.1 Wheat cytosol 10.73 60.59
TraesCS7D01G543900.1 Wheat endoplasmic reticulum 24.69 59.7
TraesCS7B01G490100.1 Wheat cytosol 13.26 59.61
OQU82964 Sorghum cytosol 46.6 59.6
TraesCS7A01G478400.1 Wheat cytosol 14.92 59.58
HORVU6Hr1G010000.1 Barley cytosol 20.33 59.29
Zm00001d024396_P001 Maize plastid 55.06 58.81
TraesCS7B01G491800.1 Wheat cytosol 13.53 58.27
EES08064 Sorghum cytosol 51.31 57.59
KXG27854 Sorghum cytosol 51.4 57.58
HORVU6Hr1G003130.1 Barley peroxisome 13.44 57.25
TraesCSU01G112200.1 Wheat cytosol 50.7 57.02
TraesCS7A01G567300.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 9.25 56.99
KXG27860 Sorghum cytosol 51.22 56.61
TraesCS6D01G400300.1 Wheat cytosol 26.7 56.56
TraesCS6B01G070300.1 Wheat cytosol 32.02 56.55
TraesCS6A01G415000.1 Wheat cytosol 52.62 56.41
TraesCS7B01G491000.1 Wheat cytosol 18.06 56.25
TraesCS6B01G069700.2 Wheat cytosol 28.01 56.02
TraesCS7D01G544100.1 Wheat cytosol 34.55 55.85
TraesCSU01G111500.2 Wheat cytosol 22.16 55.82
TraesCS6D01G400700.2 Wheat cytosol 35.51 55.75
HORVU6Hr1G010100.1 Barley cytosol 34.64 55.68
TraesCS6D01G400400.1 Wheat cytosol 24.08 55.53
TraesCS7B01G491400.1 Wheat endoplasmic reticulum 35.95 55.53
HORVU7Hr1G122420.3 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 30.98 55.21
TraesCS7B01G491100.2 Wheat cytosol, endoplasmic reticulum 32.29 55.06
TraesCSU01G111900.3 Wheat cytosol 42.76 55.06
TraesCS7D01G544600.1 Wheat cytosol, endoplasmic reticulum 48.25 55.02
TraesCS7A01G333500.1 Wheat cytosol, plastid 51.05 54.83
TraesCS7B01G491200.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 40.31 54.8
TraesCS7A01G567200.2 Wheat cytosol 50.52 54.73
HORVU6Hr1G009990.1 Barley cytosol 9.95 54.55
HORVU7Hr1G122400.1 Barley cytosol 37.61 53.88
TraesCS7A01G567400.1 Wheat cytosol 50.17 53.84
TraesCS7B01G490200.1 Wheat cytosol 21.03 53.44
TraesCS5D01G428900.1 Wheat cytosol 32.29 53.39
TraesCS7B01G491300.1 Wheat cytosol 9.25 53.0
TraesCS2B01G599700.1 Wheat cytosol 34.38 52.89
TraesCS7A01G566700.1 Wheat cytosol 30.8 52.77
TraesCS7A01G566600.1 Wheat extracellular, plasma membrane 11.78 52.53
TraesCS7B01G492000.1 Wheat cytosol 50.09 52.42
TraesCS7D01G465800.1 Wheat mitochondrion 24.78 51.64
TraesCS7A01G566500.1 Wheat cytosol 26.0 51.56
TraesCS6A01G052400.1 Wheat cytosol 53.49 50.91
TraesCS7A01G478300.1 Wheat cytosol 27.4 50.24
TraesCS7B01G380900.1 Wheat endoplasmic reticulum, golgi, mitochondrion, peroxisome 21.12 49.69
TraesCS7A01G568700.2 Wheat mitochondrion 30.72 49.03
TraesCS7D01G465700.1 Wheat cytosol 21.73 47.88
HORVU6Hr1G010230.11 Barley cytosol, plastid 22.95 47.64
TraesCS7B01G380700.1 Wheat extracellular 11.78 46.71
TraesCS6A01G052500.1 Wheat cytosol 55.58 44.61
OQU84098 Sorghum cytosol 40.14 44.19
TraesCS6B01G070900.1 Wheat cytosol 55.06 44.06
TraesCSU01G111100.1 Wheat cytosol 55.32 44.03
TraesCS6A01G051900.4 Wheat cytosol 55.15 43.89
TraesCSU01G112000.1 Wheat cytosol, endoplasmic reticulum 54.1 43.75
TraesCS6B01G069500.1 Wheat cytosol 54.19 43.7
TraesCSU01G111000.1 Wheat cytosol 54.28 43.62
TraesCS6A01G052200.1 Wheat cytosol 54.54 43.55
TraesCS6B01G069900.2 Wheat cytosol 54.89 43.35
TraesCS1B01G348600.2 Wheat cytosol 54.45 43.27
TraesCS3B01G554500.1 Wheat cytosol 53.23 43.17
TraesCS6B01G070500.2 Wheat cytosol 53.49 43.05
TraesCSU01G111400.1 Wheat cytosol 54.1 42.88
TraesCS6B01G069400.2 Wheat cytosol 53.93 42.8
TraesCSU01G110800.1 Wheat cytosol 53.4 42.44
TraesCS7B01G489900.1 Wheat cytosol, endoplasmic reticulum 52.53 42.42
TraesCS6B01G070400.1 Wheat cytosol 54.28 42.31
TraesCSU01G112400.2 Wheat cytosol 54.54 42.09
TraesCS7D01G544500.1 Wheat cytosol 51.66 41.43
TraesCS7B01G491600.2 Wheat cytosol 51.48 41.29
TraesCS7D01G544300.1 Wheat cytosol 50.0 40.38
EER91059 Sorghum cytosol 38.66 40.31
TraesCS7A01G568100.1 Wheat cytosol, plasma membrane 49.39 39.53
HORVU6Hr1G010220.1 Barley vacuole 36.56 39.42
EER93136 Sorghum extracellular, plasma membrane 37.35 38.91
TraesCS6B01G070700.1 Wheat cytosol 37.0 37.99
TraesCS7D01G525700.1 Wheat mitochondrion, plastid 38.57 37.94
TraesCS7A01G566800.1 Wheat cytosol 31.33 37.71
TraesCS7D01G544000.1 Wheat cytosol 26.88 33.59
HORVU4Hr1G079510.5 Barley endoplasmic reticulum, golgi, plastid 24.35 32.86
OQU84002 Sorghum cytosol 17.63 32.11
KXG29105 Sorghum cytosol 28.36 31.89
KXG39005 Sorghum cytosol 28.53 31.47
OQU80132 Sorghum cytosol 26.79 31.36
TraesCS5B01G422400.1 Wheat cytosol 49.91 30.49
KXG20980 Sorghum cytosol 27.66 29.57
TraesCS7A01G567500.2 Wheat mitochondrion, plastid 45.2 29.5
TraesCS7D01G436300.1 Wheat cytosol 52.09 28.28
TraesCSU01G111600.1 Wheat extracellular, plasma membrane 14.83 27.69
OQU89955 Sorghum cytosol 25.13 26.72
EER97218 Sorghum mitochondrion, plasma membrane 25.13 25.81
TraesCS6A01G052300.1 Wheat extracellular, golgi 14.83 25.3
TraesCS7D01G544200.1 Wheat plasma membrane, plastid, vacuole 13.79 24.76
KXG38346 Sorghum nucleus 26.61 20.01
Protein Annotations
Gene3D:3.40.50.300Gene3D:3.80.10.10MapMan:35.1UniProt:A0A1B6PQA9ncoils:CoilGO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0043531InterPro:IPR032675ProteinID:KXG27843.1EnsemblPlants:KXG27844
ProteinID:KXG27844ProteinID:KXG27844.1ProteinID:KXG27845.1InterPro:LRR_dom_sfInterPro:NB-ARCInterPro:P-loop_NTPase
PFAM:PF00931PRINTS:PR00364PANTHER:PTHR23155PANTHER:PTHR23155:SF872InterPro:RX-like_CCEnsemblPlantsGene:SORBI_3005G053200
SUPFAM:SSF52058SUPFAM:SSF52540UniParc:UPI00081AE02BSEG:seg::
Description
hypothetical protein
Coordinates
chr5:+:5366086..5378807
Molecular Weight (calculated)
130422.0 Da
IEP (calculated)
7.067
GRAVY (calculated)
-0.212
Length
1146 amino acids
Sequence
(BLAST)
0001: MAGVLDALAS YIQNMLLQMA AEEVHMLLGV SGEIDNMDIK LRDLKNILAD ADRRNITDKS VLAWGIELRN AMYDATDILD LCKLKAMEQG QRHDAGCFNP
0101: LLFCIRNPLH AHDIGSRIKN LNKRLDDIKA RGASFNFLNL STYEDRGRNV ISYGSSTRET SGGLVESGLV GEKIEEDTIN LVEMLTKKYP TDDNKSNKIM
0201: VFSIVGAGGI GKTTLAQKIF NNEVIKDEFK KKIWLSVNQG FDDIEMLRRV IIEAGGNHHD CGNAKVSLEH TLIEALKGQK TLLIIDDVWD SRIWEGVLRT
0301: PFVNAMLAEG SRVLVTTRHD TVARQMKAEE PYHRIDRLGL EDAWMLLKKQ AVRDVNDEPQ VENLKDIGLI LVKKCDGLPL GIKVMGGLLS RKRITRTDWQ
0401: KVLDDSLWSI SQMPEELNYA VYLSYEDLDP CLKPCFLHYS LLPRGTVFFV HEIVGMWIGE GYVHGTLRDD LEEIGREYYN ELIQRNLIEP DIKFIDQSVC
0501: NMHDVVRSFA QNMFRDEALI THNSRIGIDK LKAQKFMRLS LESKQSEQSD LEWCSLQTQM SLRTMLLFGN IKIQPGDSFR SFSSLRTLHL GSVNIVAIPE
0601: SLYQLKHLRY LSIENSNISK LSEDIGKLKF LQFISLFGCP SLTKLPSSIG LLHDLRYLCL HRTNISVVPR DFCGLTSLRK LYGFPAHMDC DRCSLEELGP
0701: LSQLTELNIS FLENVASSSS AIQAKLGGKK RLRYLSLGCT SRLGDDGLLV KKEEGISEKA KRQIEEVFDE LCPPLGLENL NIEGYFGERL PRWMMSAAAV
0801: MPLRSLRTVT MDNLACCTEL PSGLSQLPCL ELLQIVRAPA IKCVGHEWLQ PNNQLGFAFP RLQELHFEGM VEWEEWEWEE QVKGMPILEL LKLKMCKLRR
0901: VPPGLAFHAR ALKKLCIYGV KHLSSLENFA SVVHLDVFRN THLERISNLP KLQKLVIVMC PKLKVVDGMP ALQRLNLEDY DMETVPRYLQ DVNPRHLLLH
1001: CSISLLTCIA AGKSGPQWDK FSHIQQVKAA NEEGCPRKWY VLYTRNPYRF ETNISRSAIA QAHGRRIWLA YSETCPIEDE WPTGGHTYVE KRMPLCVRFR
1101: CNAYRHLNGW FDEACLHCHE ADNIASPSDQ WTQGEVLSAR IKTVWA
Best Arabidopsis Sequence Match ( AT1G58400.2 )
(BLAST)
001: MVEAIVSFGV EKLWDRLTQE YEQFQGVEDR IAELKSNLNL LKSFLKDAEA KKNTSQMVRH CVEEIKEIVY DTENMIETFI LKEAARKRSG IIRRITKLTC
101: IKVHRWEFAS DIGGISKRIS KVIQDMHSFG VQQMISDGSQ SSHLLQERER EMRQTFSRGY ESDFVGLEVN VKKLVGYLVE EDDIQIVSVT GMGGLGKTTL
201: ARQVFNHEDV KHQFDRLAWV CVSQEFTRKN VWQMILQNLT SRETKDEILQ MEEAELHDEL FQLLETSKSL IVFDDIWKEE DWGLINPIFP PKKGWKVLIT
301: SRTETIAMHG NRRYVNFKPE CLTILESWIL FQRIAMPRVD ESEFKVDKEM EMMGKQMIKY CGGLPLAVKV LGGLLAAKYT FHDWKRLSEN IGCHIVGRTD
401: FSDGNNSSVY HVLSLSFEEL PSYLKHCFLY LAHFPEDHNI KVEKLSYCWA AEGILEPRHY HGQTIRDVGE SYIEELVRRN MVIAERDVTT LRFEACHLHD
501: MMREVCLLKA KEENFVQIAS ILPPTANSQY PGTSRRFVSQ NPTTLHVSRD INNPKLQSLL IVWENRRKSW KLLGSSFIRL ELLRVLDLYK AKFEGRNLPS
601: GIGKLIHLRY LNLDLARVSR LPSSLGNLRL LIYLDINVCT KSLFVPNCLM GMHELRYLRL PFNTSKEIKL GLCNLVNLET LENFSTENSS LEDLRGMVSL
701: RTLTIGLFKH ISKETLFASI LGMRHLENLS IRTPDGSSKF KRIMEDGIVL DAIHLKQLNL RLYMPKLPDE QHFPSHLTSI SLDGCCLVED PLPILEKLLE
801: LKEVRLDFRA FCGKRMVSSD GGFPQLHRLY IWGLAEWEEW IVEEGSMPRL HTLTIWNCQK LKQLPDGLRF IYSIKDLDMD KKWKEILSEG GEEYYKVQHI
901: PSVKFEKDYK
Arabidopsis Description
Putative disease resistance protein At1g58400 [Source:UniProtKB/Swiss-Prot;Acc:Q8W3K3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.