Factsheet for TraesCS7D01G543900.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G465800.1	Wheat	mitochondrion	77.43	66.73
TraesCS6D01G400300.1	Wheat	cytosol	62.45	54.71
TraesCS7D01G544100.1	Wheat	cytosol	77.22	51.62
TraesCS7D01G039000.1	Wheat	cytosol	54.22	49.23
TraesCS7D01G038900.1	Wheat	cytosol	17.09	44.51
TraesCS7A01G568700.2	Wheat	mitochondrion	56.12	37.05
TraesCS7D01G544600.1	Wheat	cytosol, endoplasmic reticulum	77.0	36.32
OQU82964	Sorghum	cytosol	58.44	30.92
EES08064	Sorghum	cytosol	59.07	27.42
KXG27854	Sorghum	cytosol	58.44	27.08
KXG27860	Sorghum	cytosol	59.07	27.0
Zm00001d024396_P001	Maize	plastid	60.97	26.93
KXG27846	Sorghum	cytosol	58.86	26.52
TraesCS7D01G544300.1	Wheat	cytosol	75.74	25.3
TraesCS7D01G544500.1	Wheat	cytosol	75.53	25.05
OQU82958	Sorghum	cytosol	59.92	24.78
KXG27844	Sorghum	cytosol	59.7	24.69
KXG27853	Sorghum	cytosol	59.7	24.65
TraesCS4D01G004100.1	Wheat	cytosol	55.27	24.58
TraesCS1D01G383800.1	Wheat	cytosol	54.64	24.16
TraesCS3D01G068200.1	Wheat	cytosol	30.59	23.73
TraesCS4D01G004200.1	Wheat	cytosol	52.74	23.5
TraesCS2D01G567500.1	Wheat	cytosol	46.84	21.26
TraesCS3D01G528100.2	Wheat	plasma membrane	44.94	19.17
TraesCS7D01G436300.1	Wheat	cytosol	75.95	17.05
TraesCS3D01G073500.1	Wheat	cytosol	31.01	16.33
TraesCS7D01G552700.1	Wheat	cytosol	31.86	13.83
TraesCS3D01G068100.1	Wheat	extracellular	29.32	13.61
TraesCS3D01G068800.1	Wheat	cytosol	28.06	13.5
TraesCS7D01G525700.1	Wheat	mitochondrion, plastid	32.49	13.22
TraesCS2D01G567200.1	Wheat	cytosol	20.25	13.08
TraesCS2D01G495900.1	Wheat	cytosol, plastid	21.31	12.98
TraesCS5D01G185600.1	Wheat	cytosol	24.47	11.07
TraesCS5D01G185700.1	Wheat	plastid	24.68	10.79
TraesCS3D01G073600.1	Wheat	cytosol, mitochondrion, plasma membrane	17.09	10.59
TraesCS6D01G400700.2	Wheat	cytosol	16.24	10.55
TraesCS5D01G428900.1	Wheat	cytosol	14.13	9.67
TraesCS1D01G242200.1	Wheat	cytosol	10.34	8.21
TraesCS1D01G149200.1	Wheat	cytosol	19.2	6.58
TraesCS3D01G036300.1	Wheat	cytosol	7.59	5.33
TraesCS7D01G465700.1	Wheat	cytosol	1.05	0.96
TraesCS7D01G544200.1	Wheat	plasma membrane, plastid, vacuole	0.21	0.16
TraesCS7D01G544000.1	Wheat	cytosol	0.0	0.0
TraesCS6D01G400400.1	Wheat	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS7D01G543900.1	EnsemblPlantsGene:TraesCS7D01G543900	Gene3D:1.10.8.430	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	InterPro:RX-like_CC	PANTHER:PTHR44851
PANTHER:PTHR44851:SF2	PFAM:PF00931	PRINTS:PR00364	SEG:seg	SUPFAM:SSF52540	TIGR:cd14798
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:632018398..632020912

Molecular Weight (calculated)

52966.5 Da

IEP (calculated)

5.595

GRAVY (calculated)

-0.185

Length

474 amino acids

Sequence
(BLAST)

001: MVLDAFAFYL GNLLRQVAAE ELGMMLGVSG EIDKMGDKLR DLKNFLADAD RRNITDETVQ EWVGELKRAM YEAADIIDLC QLKAMEHGSS SVDAGCFNPL
101: LFCMRNPFHA HEIGTRIKAL NQRLDTIKER SAAFNFINLG SYEHHSSNVN ASRHGDPSRE MSGELDRSGV VGDQIEEDTR ALVAQIMQTS EEVNGKIMVV
201: AIVGVGGIGK TTLAQKVFND EAIQGEFIKK IWLSVNQNFN EAELLRRVII EAGGDAQSAG NAKATLHRSL KGALIGHKTL LVMDDVWNHG AWDGVLKIPL
301: VDVVASGSRV LITTRDEGVA RRMTATWPYH HVDALAPDDA WSLLKKQVLS SEIDEYHITM LKDIGLKIIQ KCGGLPLAVK VMGGFLRRRG ELRRDWEQVL
401: DDSKWSITEM PQELSYAVYL SYQDMPPHLK QCFLYYSLLP QNKTYYAHEV VALWISEGFV HGSSNDLEEL GINY

Best Arabidopsis Sequence Match ( AT3G14470.1 )
(BLAST)

0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD

Arabidopsis Description

RPPL1Putative disease resistance RPP13-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.