Factsheet for HORVU6Hr1G009990.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G008120.1	Barley	plastid	37.32	33.33
HORVU6Hr1G010100.1	Barley	cytosol	59.81	17.53
HORVU4Hr1G079510.5	Barley	endoplasmic reticulum, golgi, plastid	55.02	13.55
HORVU6Hr1G010220.1	Barley	vacuole	67.46	13.26
HORVU7Hr1G122400.1	Barley	cytosol	49.76	13.0
HORVU1Hr1G083510.3	Barley	cytosol	43.06	10.83
Zm00001d024396_P001	Maize	plastid	54.55	10.62
KXG27846	Sorghum	cytosol	50.72	10.08
KXG27844	Sorghum	cytosol	54.55	9.95
OQU82958	Sorghum	cytosol	54.07	9.86
KXG27853	Sorghum	cytosol	52.63	9.58
HORVU7Hr1G008100.2	Barley	cytosol	58.37	8.83
HORVU3Hr1G012620.2	Barley	cytosol	18.66	8.19
HORVU4Hr1G000350.2	Barley	cytosol, mitochondrion	44.02	7.54
EES08064	Sorghum	cytosol	35.41	7.25
KXG27854	Sorghum	cytosol	35.41	7.23
KXG27860	Sorghum	cytosol	34.93	7.04
HORVU3Hr1G012880.4	Barley	cytosol	22.01	6.7
HORVU5Hr1G055260.1	Barley	mitochondrion, plasma membrane	17.7	6.64
HORVU3Hr1G012340.8	Barley	cytosol	20.57	6.16
HORVU4Hr1G000310.6	Barley	cytosol	27.27	5.91
HORVU7Hr1G120540.3	Barley	cytosol	29.19	5.52
HORVU2Hr1G127490.4	Barley	cytosol	26.79	5.41
HORVU3Hr1G012860.1	Barley	cytosol	22.49	4.82
HORVU3Hr1G012660.4	Barley	cytosol	23.92	4.79
HORVU0Hr1G039660.8	Barley	cytosol	23.45	4.67
HORVU3Hr1G012510.23	Barley	cytosol	21.53	4.41
HORVU5Hr1G122310.2	Barley	cytosol	18.18	4.24
HORVU3Hr1G013270.1	Barley	cytosol	19.62	4.15
OQU82964	Sorghum	cytosol	16.75	3.91
HORVU3Hr1G013250.2	Barley	cytosol	17.7	3.74
HORVU1Hr1G040540.18	Barley	mitochondrion	25.84	3.57
HORVU6Hr1G010110.1	Barley	cytosol	0.0	0.0
HORVU6Hr1G010040.1	Barley	mitochondrion, plastid	0.0	0.0
HORVU6Hr1G010230.11	Barley	cytosol, plastid	0.0	0.0
HORVU6Hr1G010000.1	Barley	cytosol	0.0	0.0
HORVU6Hr1G003130.1	Barley	peroxisome	0.0	0.0
HORVU7Hr1G122420.3	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	0.0	0.0
HORVU3Hr1G012800.1	Barley	cytosol	0.0	0.0
HORVU3Hr1G012760.2	Barley	cytosol	0.0	0.0
HORVU3Hr1G012650.19	Barley	cytosol	0.0	0.0
HORVU3Hr1G012610.1	Barley	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU6Hr1G009990.1	EnsemblPlantsGene:HORVU6Hr1G009990	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf	PANTHER:PTHR23155
PANTHER:PTHR23155:SF872	SEG:seg	SUPFAM:SSF52058	UniParc:UPI000B47D68C	UniProt:A0A287T9K8	MapMan:35.2

Description

No Description!

Coordinates

chrchr6H:-:17804669..17805379

Molecular Weight (calculated)

22889.5 Da

IEP (calculated)

6.082

GRAVY (calculated)

-0.244

Length

209 amino acids

Sequence
(BLAST)

001: FQIDRAPAIK RVGPEFMQSY HHHSPHPSFP SLHEMNLIGM VQWEEWEWEE HVQAFPVLRE LMLKDCKLKC LPPGLASQAR ALKELSVQNV QGLFSLENFA
101: SLVELNVLEG VPALQRLKLV DLEMETLPEY MGDINLRQLE LYCSLALLTS IAAGQSSPEW DKFSHVKHVK VYSNGGDNPR KWYVLYTAAP YSLETNVNRS
201: XXXXXXXXX

Best Arabidopsis Sequence Match ( AT1G58848.1 )
(BLAST)

0001: MAGELISFGI QNLWNLLSQE CELFQGVEDQ VTELKRDLNL LSSFLKDADA KKHTSAVVKN CVEEIKEIIY DGEDTIETFV LEQNLGKTSG IKKSIRRLAC
0101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRPRFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
0201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
0301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
0401: FNDDNNNTCN YVLSLSFEEL PSYLKHCFLY LAHFPDDYEI NVKNLSYYWA AEGIFQPRHY DGEIIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
0501: MMREVCLLKA KEENFLQITS SRTSTGNSLS IVTSRRLVYQ YPITLDVEKD INDPKLRSLV VVANTYMFWG GWSWMLLGSS FIRLELLRVL DIHRAKLKGG
0601: KLASSIGQLI HLRYLNLKHA EVTHIPYSLG NLKLLIYLNL VILVSGSTLV PNVLKEMQQL RYLALPKDMG RKTKLELSNL VKLETLKNFS TKNCSLEDLR
0701: GMVRLRTLTI ELRKETSLET LAASIGGLKY LESLTITDLG SEMRTKEAGI VFDFVYLKTL TLKLYMPRLS KEQHFPSHLT TLYLQHCRLE EDPMPILEKL
0801: HQLKELELRR KSFSGKEMVC SSGGFPQLQK LSIKGLEEWE DWKVEESSMP VLHTLDIRDC RKLKQLPDEH LPSHLTSISL FFCCLEEDPM PTLERLVHLK
0901: ELQLLFRSFS GRIMVCAGSG FPQLHKLKLS ELDGLEEWIV EDGSMPQLHT LEIRRCPKLK KLPNGFPQLQ NLELNELEEW EEWIVEDGSM PLLHTLRIWN
1001: CPKLKQLPDG LRFIYSLKNL TVPKRWKKRL SKGGEDYYKV QHIPSVEFY

Arabidopsis Description

RF9Probable disease resistance protein RDL6 [Source:UniProtKB/Swiss-Prot;Acc:P0DI18]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.