Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G010110.1 | Barley | cytosol | 63.58 | 44.4 |
| Os05t0250600-00 | Rice | endoplasmic reticulum, extracellular, mitochondrion | 33.33 | 28.12 |
| HORVU6Hr1G010000.1 | Barley | cytosol | 64.81 | 26.72 |
| TraesCS1B01G397100.1 | Wheat | cytosol | 40.74 | 22.92 |
| HORVU6Hr1G010230.11 | Barley | cytosol, plastid | 61.73 | 18.12 |
| HORVU7Hr1G122420.3 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 50.0 | 12.6 |
| HORVU3Hr1G012610.1 | Barley | plastid | 20.37 | 10.75 |
| Os05t0250700-00 | Rice | cytosol | 37.65 | 8.78 |
| HORVU3Hr1G012760.2 | Barley | cytosol | 23.46 | 8.24 |
| HORVU3Hr1G012650.19 | Barley | cytosol | 22.84 | 8.03 |
| HORVU4Hr1G000310.6 | Barley | cytosol | 42.59 | 7.15 |
| TraesCS1D01G383800.1 | Wheat | cytosol | 40.12 | 6.06 |
| HORVU4Hr1G000350.2 | Barley | cytosol, mitochondrion | 41.98 | 5.57 |
| Os11t0704100-00 | Rice | cytosol | 38.89 | 5.55 |
| TraesCS1A01G376600.1 | Wheat | cytosol | 39.51 | 5.22 |
| HORVU2Hr1G127490.4 | Barley | cytosol | 29.63 | 4.63 |
| HORVU7Hr1G008100.2 | Barley | cytosol | 39.51 | 4.63 |
| HORVU3Hr1G012800.1 | Barley | cytosol | 9.26 | 4.52 |
| HORVU3Hr1G012510.23 | Barley | cytosol | 24.69 | 3.92 |
| HORVU3Hr1G012860.1 | Barley | cytosol | 23.46 | 3.9 |
| HORVU3Hr1G012660.4 | Barley | cytosol | 21.6 | 3.35 |
| HORVU3Hr1G013270.1 | Barley | cytosol | 19.75 | 3.24 |
| HORVU5Hr1G122310.2 | Barley | cytosol | 17.9 | 3.24 |
| HORVU3Hr1G013250.2 | Barley | cytosol | 17.28 | 2.83 |
| HORVU7Hr1G120540.3 | Barley | cytosol | 17.9 | 2.62 |
| HORVU0Hr1G039660.8 | Barley | cytosol | 15.43 | 2.38 |
| HORVU1Hr1G040540.18 | Barley | mitochondrion | 16.05 | 1.72 |
| HORVU1Hr1G083510.3 | Barley | cytosol | 1.23 | 0.24 |
| HORVU7Hr1G122400.1 | Barley | cytosol | 0.0 | 0.0 |
| TraesCS1B01G397000.1 | Wheat | peroxisome | 0.0 | 0.0 |
| HORVU3Hr1G012340.8 | Barley | cytosol | 0.0 | 0.0 |
| HORVU3Hr1G012620.2 | Barley | cytosol | 0.0 | 0.0 |
| HORVU3Hr1G012880.4 | Barley | cytosol | 0.0 | 0.0 |
| HORVU4Hr1G079510.5 | Barley | endoplasmic reticulum, golgi, plastid | 0.0 | 0.0 |
| HORVU6Hr1G009990.1 | Barley | cytosol | 0.0 | 0.0 |
| HORVU7Hr1G008120.1 | Barley | plastid | 0.0 | 0.0 |
| HORVU5Hr1G055260.1 | Barley | mitochondrion, plasma membrane | 0.0 | 0.0 |
| HORVU6Hr1G010220.1 | Barley | vacuole | 0.0 | 0.0 |
| HORVU6Hr1G003130.1 | Barley | peroxisome | 0.0 | 0.0 |
| HORVU6Hr1G010100.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G010040.1 | EnsemblPlantsGene:HORVU6Hr1G010040 | PANTHER:PTHR44851 | PANTHER:PTHR44851:SF2 | SEG:seg | UniParc:UPI000B472681 |
| UniProt:A0A287T9L3 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:17836971..17837602
Molecular Weight (calculated)
17619.2 Da
IEP (calculated)
8.766
GRAVY (calculated)
-0.206
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MISTRWMLSL GISRTSSPML IEGTSQTRAC KSGWPSSSVP CTKLPTYVGC FNPLLFCMRN PSHAHGIATR IKDLNKRLDT IKERSAAFSF INLGSYEDRS
101: SKVQASNSGN TCRETSGEFD RSGIVGEKIE EDTRKLVEII LTEKEGNANI MVVAIVGVGG IG
101: SKVQASNSGN TCRETSGEFD RSGIVGEKIE EDTRKLVEII LTEKEGNANI MVVAIVGVGG IG
001: MVDAVVTVFL EKTLNILEEK GRTVSDYRKQ LEDLQSELKY MQSFLKDAER QKRTNETLRT LVADLRELVY EAEDILVDCQ LADGDDGNEQ RSSNAWLSRL
101: HPARVPLQYK KSKRLQEINE RITKIKSQVE PYFEFITPSN VGRDNGTDRW SSPVYDHTQV VGLEGDKRKI KEWLFRSNDS QLLIMAFVGM GGLGKTTIAQ
201: EVFNDKEIEH RFERRIWVSV SQTFTEEQIM RSILRNLGDA SVGDDIGTLL RKIQQYLLGK RYLIVMDDVW DKNLSWWDKI YQGLPRGQGG SVIVTTRSES
301: VAKRVQARDD KTHRPELLSP DNSWLLFCNV AFAANDGTCE RPELEDVGKE IVTKCKGLPL TIKAVGGLLL CKDHVYHEWR RIAEHFQDEL RGNTSETDNV
401: MSSLQLSYDE LPSHLKSCIL TLSLYPEDCV IPKQQLVHGW IGEGFVMWRN GRSATESGED CFSGLTNRCL IEVVDKTYSG TIITCKIHDM VRDLVIDIAK
501: KDSFSNPEGL NCRHLGISGN FDEKQIKVNH KLRGVVSTTK TGEVNKLNSD LAKKFTDCKY LRVLDISKSI FDAPLSEILD EIASLQHLAC LSLSNTHPLI
601: QFPRSMEDLH NLQILDASYC QNLKQLQPCI VLFKKLLVLD MTNCGSLECF PKGIGSLVKL EVLLGFKPAR SNNGCKLSEV KNLTNLRKLG LSLTRGDQIE
701: EEELDSLINL SKLMSISINC YDSYGDDLIT KIDALTPPHQ LHELSLQFYP GKSSPSWLSP HKLPMLRYMS ICSGNLVKMQ EPFWGNENTH WRIEGLMLSS
801: LSDLDMDWEV LQQSMPYLRT VTANWCPELE SFAIEDVGFR GGVWMKTPLH RT
101: HPARVPLQYK KSKRLQEINE RITKIKSQVE PYFEFITPSN VGRDNGTDRW SSPVYDHTQV VGLEGDKRKI KEWLFRSNDS QLLIMAFVGM GGLGKTTIAQ
201: EVFNDKEIEH RFERRIWVSV SQTFTEEQIM RSILRNLGDA SVGDDIGTLL RKIQQYLLGK RYLIVMDDVW DKNLSWWDKI YQGLPRGQGG SVIVTTRSES
301: VAKRVQARDD KTHRPELLSP DNSWLLFCNV AFAANDGTCE RPELEDVGKE IVTKCKGLPL TIKAVGGLLL CKDHVYHEWR RIAEHFQDEL RGNTSETDNV
401: MSSLQLSYDE LPSHLKSCIL TLSLYPEDCV IPKQQLVHGW IGEGFVMWRN GRSATESGED CFSGLTNRCL IEVVDKTYSG TIITCKIHDM VRDLVIDIAK
501: KDSFSNPEGL NCRHLGISGN FDEKQIKVNH KLRGVVSTTK TGEVNKLNSD LAKKFTDCKY LRVLDISKSI FDAPLSEILD EIASLQHLAC LSLSNTHPLI
601: QFPRSMEDLH NLQILDASYC QNLKQLQPCI VLFKKLLVLD MTNCGSLECF PKGIGSLVKL EVLLGFKPAR SNNGCKLSEV KNLTNLRKLG LSLTRGDQIE
701: EEELDSLINL SKLMSISINC YDSYGDDLIT KIDALTPPHQ LHELSLQFYP GKSSPSWLSP HKLPMLRYMS ICSGNLVKMQ EPFWGNENTH WRIEGLMLSS
801: LSDLDMDWEV LQQSMPYLRT VTANWCPELE SFAIEDVGFR GGVWMKTPLH RT
Arabidopsis Description
RPP13L4Disease resistance RPP13-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q38834]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.