Factsheet for HORVU6Hr1G010110.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G010040.1	Barley	mitochondrion, plastid	44.4	63.58
HORVU6Hr1G010000.1	Barley	cytosol	83.62	49.36
HORVU6Hr1G010230.11	Barley	cytosol, plastid	84.05	35.33
HORVU7Hr1G122420.3	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	67.24	24.26
TraesCSU01G112200.1	Wheat	cytosol	80.17	18.25
OQU82964	Sorghum	cytosol	63.79	16.52
HORVU3Hr1G012760.2	Barley	cytosol	30.17	15.18
EES08064	Sorghum	cytosol	64.66	14.69
HORVU4Hr1G000310.6	Barley	cytosol	60.34	14.51
KXG27854	Sorghum	cytosol	63.79	14.47
HORVU3Hr1G012650.19	Barley	cytosol	28.45	14.32
KXG27860	Sorghum	cytosol	63.36	14.18
HORVU3Hr1G012610.1	Barley	plastid	18.53	14.01
Zm00001d024396_P001	Maize	plastid	64.22	13.89
KXG27846	Sorghum	cytosol	62.5	13.78
KXG27853	Sorghum	cytosol	63.36	12.8
KXG27844	Sorghum	cytosol	62.5	12.65
OQU82958	Sorghum	cytosol	62.5	12.65
HORVU4Hr1G000350.2	Barley	cytosol, mitochondrion	59.91	11.39
HORVU2Hr1G127490.4	Barley	cytosol	43.1	9.65
HORVU7Hr1G008100.2	Barley	cytosol	54.74	9.19
HORVU3Hr1G012800.1	Barley	cytosol	11.64	8.13
HORVU3Hr1G012860.1	Barley	cytosol	28.45	6.77
HORVU3Hr1G012510.23	Barley	cytosol	28.45	6.47
HORVU3Hr1G013250.2	Barley	cytosol	26.29	6.17
HORVU3Hr1G013270.1	Barley	cytosol	25.86	6.07
HORVU3Hr1G012660.4	Barley	cytosol	25.86	5.75
HORVU7Hr1G120540.3	Barley	cytosol	24.57	5.15
HORVU5Hr1G122310.2	Barley	cytosol	17.67	4.58
HORVU0Hr1G039660.8	Barley	cytosol	19.4	4.29
HORVU1Hr1G040540.18	Barley	mitochondrion	14.66	2.25
HORVU7Hr1G008120.1	Barley	plastid	0.86	0.85
HORVU1Hr1G083510.3	Barley	cytosol	0.86	0.24
HORVU3Hr1G012340.8	Barley	cytosol	0.43	0.14
HORVU6Hr1G010220.1	Barley	vacuole	0.0	0.0
HORVU6Hr1G010100.1	Barley	cytosol	0.0	0.0
HORVU7Hr1G122400.1	Barley	cytosol	0.0	0.0
HORVU6Hr1G009990.1	Barley	cytosol	0.0	0.0
HORVU6Hr1G003130.1	Barley	peroxisome	0.0	0.0
HORVU5Hr1G055260.1	Barley	mitochondrion, plasma membrane	0.0	0.0
HORVU4Hr1G079510.5	Barley	endoplasmic reticulum, golgi, plastid	0.0	0.0
HORVU3Hr1G012880.4	Barley	cytosol	0.0	0.0
HORVU3Hr1G012620.2	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU6Hr1G010110.1	EnsemblPlantsGene:HORVU6Hr1G010110	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	InterPro:RX-like_CC	PANTHER:PTHR44851	PANTHER:PTHR44851:SF2
PFAM:PF00931	SEG:seg	SUPFAM:SSF52540	UniParc:UPI000B4618D7	UniProt:A0A287T9N6	MapMan:35.2

Description

No Description!

Coordinates

chrchr6H:+:17899298..17900555

Molecular Weight (calculated)

25709.1 Da

IEP (calculated)

5.411

GRAVY (calculated)

-0.175

Length

232 amino acids

Sequence
(BLAST)

001: MAMVLDAFAS YVQNMLTEMV NEEVHMLLGV GDEIGKMEVK LGDLKNFLAD ADRRNITDTR VQEWVSQLKR AMYEAADILD LCQLKAMEHG PSTGDVGCFN
101: PLLFCMRNPS HAHDIGTRIK ALNKKLDFIK ERSTAFSFIN LGSYEDRSSK VHVFLAGNTS RETSGEFDRS GVVGEKIEED TRKLVEIMLT EKKGDTNIMV
201: VAIVGVGGIG KTTLAQKVIN DGAIKAEFEK TI

Best Arabidopsis Sequence Match ( AT3G50950.1 )
(BLAST)

001: MVDAVVTVFL EKTLNILEEK GRTVSDYRKQ LEDLQSELKY MQSFLKDAER QKRTNETLRT LVADLRELVY EAEDILVDCQ LADGDDGNEQ RSSNAWLSRL
101: HPARVPLQYK KSKRLQEINE RITKIKSQVE PYFEFITPSN VGRDNGTDRW SSPVYDHTQV VGLEGDKRKI KEWLFRSNDS QLLIMAFVGM GGLGKTTIAQ
201: EVFNDKEIEH RFERRIWVSV SQTFTEEQIM RSILRNLGDA SVGDDIGTLL RKIQQYLLGK RYLIVMDDVW DKNLSWWDKI YQGLPRGQGG SVIVTTRSES
301: VAKRVQARDD KTHRPELLSP DNSWLLFCNV AFAANDGTCE RPELEDVGKE IVTKCKGLPL TIKAVGGLLL CKDHVYHEWR RIAEHFQDEL RGNTSETDNV
401: MSSLQLSYDE LPSHLKSCIL TLSLYPEDCV IPKQQLVHGW IGEGFVMWRN GRSATESGED CFSGLTNRCL IEVVDKTYSG TIITCKIHDM VRDLVIDIAK
501: KDSFSNPEGL NCRHLGISGN FDEKQIKVNH KLRGVVSTTK TGEVNKLNSD LAKKFTDCKY LRVLDISKSI FDAPLSEILD EIASLQHLAC LSLSNTHPLI
601: QFPRSMEDLH NLQILDASYC QNLKQLQPCI VLFKKLLVLD MTNCGSLECF PKGIGSLVKL EVLLGFKPAR SNNGCKLSEV KNLTNLRKLG LSLTRGDQIE
701: EEELDSLINL SKLMSISINC YDSYGDDLIT KIDALTPPHQ LHELSLQFYP GKSSPSWLSP HKLPMLRYMS ICSGNLVKMQ EPFWGNENTH WRIEGLMLSS
801: LSDLDMDWEV LQQSMPYLRT VTANWCPELE SFAIEDVGFR GGVWMKTPLH RT

Arabidopsis Description

RPP13L4Disease resistance RPP13-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q38834]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.