Factsheet for HORVU4Hr1G079510.5

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plastid
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G009990.1	Barley	cytosol	13.55	55.02
TraesCS1B01G348600.2	Wheat	cytosol	93.4	54.99
HORVU7Hr1G008120.1	Barley	plastid	13.43	48.72
HORVU6Hr1G010220.1	Barley	vacuole	54.65	43.65
HORVU7Hr1G122400.1	Barley	cytosol	39.81	42.25
HORVU6Hr1G010100.1	Barley	cytosol	30.74	36.61
HORVU1Hr1G083510.3	Barley	cytosol	31.1	31.77
HORVU6Hr1G003130.1	Barley	peroxisome	9.89	31.23
HORVU7Hr1G008100.2	Barley	cytosol	49.94	30.68
HORVU3Hr1G012620.2	Barley	cytosol	15.43	27.52
Zm00001d024396_P001	Maize	plastid	31.57	24.98
KXG27844	Sorghum	cytosol	32.86	24.35
KXG27846	Sorghum	cytosol	29.8	24.05
HORVU5Hr1G055260.1	Barley	mitochondrion, plasma membrane	15.55	23.7
KXG27853	Sorghum	cytosol	31.68	23.43
OQU82958	Sorghum	cytosol	31.57	23.39
HORVU3Hr1G012880.4	Barley	cytosol	17.2	21.25
KXG27854	Sorghum	cytosol	25.21	20.92
EES08064	Sorghum	cytosol	25.09	20.86
HORVU4Hr1G000310.6	Barley	cytosol	23.2	20.41
KXG27860	Sorghum	cytosol	24.73	20.25
HORVU3Hr1G012340.8	Barley	cytosol	16.25	19.77
OQU82964	Sorghum	cytosol	20.85	19.75
HORVU4Hr1G000350.2	Barley	cytosol, mitochondrion	27.68	19.26
HORVU2Hr1G127490.4	Barley	cytosol	20.38	16.7
HORVU3Hr1G012860.1	Barley	cytosol	15.9	13.85
HORVU3Hr1G012510.23	Barley	cytosol	16.37	13.63
HORVU3Hr1G012660.4	Barley	cytosol	16.25	13.22
HORVU5Hr1G122310.2	Barley	cytosol	13.78	13.06
HORVU7Hr1G120540.3	Barley	cytosol	16.73	12.84
HORVU3Hr1G013250.2	Barley	cytosol	14.49	12.44
HORVU0Hr1G039660.8	Barley	cytosol	15.08	12.19
HORVU3Hr1G013270.1	Barley	cytosol	14.13	12.15
HORVU1Hr1G040540.18	Barley	mitochondrion	20.14	11.32
HORVU7Hr1G122420.3	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	6.6	8.71
HORVU3Hr1G012760.2	Barley	cytosol	0.59	1.08
HORVU3Hr1G012650.19	Barley	cytosol	0.47	0.87
HORVU6Hr1G010230.11	Barley	cytosol, plastid	0.0	0.0
HORVU6Hr1G010110.1	Barley	cytosol	0.0	0.0
HORVU3Hr1G012610.1	Barley	plastid	0.0	0.0
HORVU6Hr1G010040.1	Barley	mitochondrion, plastid	0.0	0.0
HORVU6Hr1G010000.1	Barley	cytosol	0.0	0.0
HORVU3Hr1G012800.1	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU4Hr1G079510.5	EnsemblPlantsGene:HORVU4Hr1G079510	Gene3D:3.80.10.10	InterPro:HARBI1_dom	InterPro:IPR032675	InterPro:LRR_dom_sf
ncoils:Coil	PANTHER:PTHR22930	PANTHER:PTHR22930:SF85	PFAM:PF13359	SEG:seg	SUPFAM:SSF52058
UniParc:UPI000B46B184	UniProt:A0A287PTA2	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:612604713..612615277

Molecular Weight (calculated)

96307.5 Da

IEP (calculated)

5.944

GRAVY (calculated)

-0.136

Length

849 amino acids

Sequence
(BLAST)

001: MRPGDSLVTF SSLRTLHIVS ANVVSLVESL HQLKHLRYLK LVTDIFVLPV NIGRIKLLQF LDLRGCENLA NLPDSVVKLG QLRFLGLADV CMIPRGFRDL
101: TSMRRLLGFR AHMDGDWCSL DELGPLSRLT IIELIQLENV SVALFAANAR LGEKIHLTNL SLSCTSKLGD DGLVKEKEGV SAEEQKRIQK VFDELCPPPS
201: VENLRIPGYF GQQLPSWMMS RSRMPLNNLK FLSFYDLACC TQLPNGLCQL PCLQLLQVDR APCIRHVGTG FLQAESAPFP RLTEMSLEGM VEWEEWEWEE
301: HVEAMPRLEK LWLINCKLRR APPGLASNTR ALKELFVEDV HHLNCLEGFS SVVELTVCGS PDLERITNLP SLQKLTITDC PKLKVLESIP VLERLVLEDY
401: IMEQLPEYMR DIKLRHLQLL CRIWLLSSIA AGQSGLEWDK FSHVEHVKAY TPDGDNQRKW YVLYTRDNFK LDSNITSFTI FSADRLSSFM VEAEGFESVY
501: KMRRSTFSHV CSLVRIPVFE YMMPWDHTFV DGRMLSLQDG VAIALRMLSS GESPVTVGSS LGVNESTILM ITRIFVEALW ERAYHQFSYP GPAKMEKIKR
601: KFGKIHGLQN CCGVVRTTHI TFGSQNCDHE ENDGLVMQAV VDPDMRFTNI WLGLPGRMNQ SSLLHESGLF MSCDKGAWLN GSKLNLSDGW QVGEYIIGDA
701: GYPLLPWLLT PYHLQDKDSS ADFPPYQDEF NRRHSAATDV MLAALARLKD TWKALDREMW RSASSCRLPQ IIYACCILHN IVIDLEEEAA DMHSDQENYT
801: EQVRQVAEED AARVRDILSQ HLIESGEGKQ EIVAVASCSG DKNKEQRAC

Best Arabidopsis Sequence Match ( AT3G55350.1 )
(BLAST)

001: MGPIKTIKKK KRAEKKVDRN VLLAATAAAT SASAAAALNN NDDDDDSSSQ SLDWWDGFSR RIYGGSTDPK TFESVFKISR KTFDYICSLV KADFTAKPAN
101: FSDSNGNPLS LNDRVAVALR RLGSGESLSV IGETFGMNQS TVSQITWRFV ESMEERAIHH LSWPSKLDEI KSKFEKISGL PNCCGAIDIT HIVMNLPAVE
201: PSNKVWLDGE KNFSMTLQAV VDPDMRFLDV IAGWPGSLND DVVLKNSGFY KLVEKGKRLN GEKLPLSERT ELREYIVGDS GFPLLPWLLT PYQGKPTSLP
301: QTEFNKRHSE ATKAAQMALS KLKDRWRIIN GVMWMPDRNR LPRIIFVCCL LHNIIIDMED QTLDDQPLSQ QHDMNYRQRS CKLADEASSV LRDELSDQLC
401: GKNSSA

Arabidopsis Description

Protein ALP1-like [Source:UniProtKB/Swiss-Prot;Acc:Q9M2U3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.