Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G060800.1 | Wheat | cytosol | 44.44 | 11.74 |
| TraesCSU01G111600.1 | Wheat | extracellular, plasma membrane | 37.61 | 7.17 |
| TraesCSU01G061700.1 | Wheat | cytosol | 59.83 | 6.36 |
| TraesCSU01G239600.1 | Wheat | cytosol | 21.37 | 5.59 |
| TraesCSU01G060400.3 | Wheat | cytosol | 46.15 | 5.09 |
| TraesCSU01G112200.1 | Wheat | cytosol | 35.04 | 4.02 |
| TraesCSU01G170200.1 | Wheat | cytosol | 22.22 | 3.53 |
| TraesCSU01G064600.1 | Wheat | plasma membrane | 31.62 | 3.49 |
| TraesCSU01G112400.2 | Wheat | cytosol | 43.59 | 3.43 |
| TraesCSU01G110800.1 | Wheat | cytosol | 41.88 | 3.4 |
| TraesCSU01G112000.1 | Wheat | cytosol, endoplasmic reticulum | 41.03 | 3.39 |
| TraesCSU01G111100.1 | Wheat | cytosol | 40.17 | 3.26 |
| TraesCSU01G111400.1 | Wheat | cytosol | 40.17 | 3.25 |
| TraesCSU01G111000.1 | Wheat | cytosol | 37.61 | 3.09 |
| TraesCSU01G138600.1 | Wheat | cytosol | 6.84 | 1.27 |
| TraesCSU01G111900.3 | Wheat | cytosol | 5.98 | 0.79 |
| TraesCSU01G136900.1 | Wheat | cytosol | 0.85 | 0.47 |
| TraesCSU01G111500.2 | Wheat | cytosol | 1.71 | 0.44 |
| Solyc07g053010.1.1 | Tomato | cytosol | 1.71 | 0.23 |
| PGSC0003DMT400067280 | Potato | cytosol, mitochondrion | 1.71 | 0.23 |
| VIT_04s0023g02380.t01 | Wine grape | cytosol | 0.85 | 0.12 |
| Solyc07g053020.1.1 | Tomato | cytosol | 0.0 | 0.0 |
| Solyc02g084890.1.1 | Tomato | cytosol, extracellular, nucleus | 0.0 | 0.0 |
| PGSC0003DMT400079012 | Potato | cytosol | 0.0 | 0.0 |
| PGSC0003DMT400067354 | Potato | cytosol | 0.0 | 0.0 |
| PGSC0003DMT400009065 | Potato | cytosol | 0.0 | 0.0 |
| CDX73766 | Canola | plastid | 0.0 | 0.0 |
| Bra036845.1-P | Field mustard | plastid | 0.0 | 0.0 |
| TraesCSU01G245300.1 | Wheat | extracellular | 0.0 | 0.0 |
| AT3G50950.1 | Thale cress | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCSU01G061600.1 | EnsemblPlantsGene:TraesCSU01G061600 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrUn:+:47951733..47952227
Molecular Weight (calculated)
13347.8 Da
IEP (calculated)
4.868
GRAVY (calculated)
-0.361
Length
117 amino acids
Sequence
(BLAST)
(BLAST)
001: MDALQKLVLT VQYSESQLPS YLQTVKSSHL LLDCCPFILI SMALGKSSSE WDKFSHIQHV EAYADEEGIE KRWHVFYTRD PYNMETNINL QELPNALSVF
101: QSRGEDGKRS CTEGICG
101: QSRGEDGKRS CTEGICG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.