Factsheet for PGSC0003DMT400009065

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 2
cytosol 3
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	extracellular
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g084890.1.1	Tomato	cytosol, extracellular, nucleus	95.75	95.53
VIT_04s0023g02380.t01	Wine grape	cytosol	64.03	63.88
AT3G50950.1	Thale cress	cytosol	58.84	58.57
PGSC0003DMT400079012	Potato	cytosol	7.78	42.04
PGSC0003DMT400067280	Potato	cytosol, mitochondrion	40.33	38.73
Bra036845.1-P	Field mustard	plastid	58.14	38.19
CDX73766	Canola	plastid	58.14	38.19
PGSC0003DMT400067354	Potato	cytosol	37.74	36.57
HORVU3Hr1G012800.1	Barley	cytosol	12.5	31.93
GSMUA_Achr3P27817_001	Banana	cytosol	9.91	29.07
TraesCS3B01G081400.1	Wheat	cytosol	15.21	28.17
GSMUA_AchrUn_...	Banana	cytosol	8.37	27.41
HORVU3Hr1G012610.1	Barley	plastid	9.55	26.38
HORVU3Hr1G012760.2	Barley	cytosol	14.03	25.81
TraesCS3B01G083700.1	Wheat	cytosol	16.63	25.78
GSMUA_Achr1P12540_001	Banana	cytosol	18.04	25.63
TraesCS3A01G068300.1	Wheat	cytosol, extracellular	14.03	25.59
TraesCS3D01G068200.1	Wheat	cytosol	18.4	25.53
TraesCS3B01G088100.1	Wheat	cytosol	16.86	25.31
TraesCS3B01G081900.1	Wheat	cytosol	19.69	25.23
TraesCS5A01G533700.1	Wheat	cytosol	19.1	25.12
TraesCS3B01G081300.1	Wheat	cytosol	14.03	25.11
Os11t0676200-00	Rice	cytosol	16.86	25.09
TraesCS3A01G068600.1	Wheat	cytosol	13.92	25.05
GSMUA_Achr10P...	Banana	cytosol	23.11	24.65
TraesCS6B01G070200.1	Wheat	cytosol	26.42	24.53
HORVU3Hr1G012650.19	Barley	cytosol	13.33	24.51
TraesCS3B01G082500.1	Wheat	cytosol	15.68	24.31
GSMUA_Achr10P...	Banana	cytosol	26.06	24.02
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane	22.41	23.93
Os11t0676800-00	Rice	cytosol	17.92	23.75
TraesCS3A01G068500.2	Wheat	cytosol, extracellular	16.04	23.73
TraesCS3A01G069200.1	Wheat	extracellular	16.86	23.71
GSMUA_Achr3P27810_001	Banana	cytosol, endoplasmic reticulum	24.41	23.6
GSMUA_Achr3P27790_001	Banana	cytosol	25.12	23.51
Os11t0676100-00	Rice	cytosol, plasma membrane	11.56	23.11
Os11t0673900-00	Rice	cytosol, plasma membrane	22.64	23.05
TraesCS4B01G365400.1	Wheat	cytosol	22.17	22.82
TraesCS1B01G169700.1	Wheat	cytosol	25.0	22.75
GSMUA_AchrUn_...	Banana	cytosol	19.22	22.61
GSMUA_Achr3P28030_001	Banana	plasma membrane	28.66	22.5
GSMUA_AchrUn_...	Banana	cytosol	18.16	22.38
GSMUA_Achr2P11320_001	Banana	cytosol	26.89	22.37
Os01t0149500-01	Rice	mitochondrion, nucleus	25.83	22.14
TraesCS3A01G068700.1	Wheat	cytosol	26.42	22.11
GSMUA_Achr3P27830_001	Banana	cytosol, peroxisome	20.87	22.1
GSMUA_Achr9P23050_001	Banana	cytosol	28.3	22.08
TraesCS3B01G088000.1	Wheat	cytosol	25.71	22.06
HORVU3Hr1G013270.1	Barley	cytosol	25.47	21.86
GSMUA_Achr1P14020_001	Banana	cytosol	26.3	21.63
GSMUA_AchrUn_...	Banana	cytosol	14.74	21.59
GSMUA_Achr2P03610_001	Banana	cytosol	26.18	21.53
GSMUA_Achr1P14030_001	Banana	cytosol	26.65	21.42
Os01t0149350-00	Rice	cytosol	24.88	21.31
Os08t0332600-00	Rice	cytosol	20.28	21.29
TraesCS3B01G082400.1	Wheat	cytosol	25.12	21.28
HORVU3Hr1G012510.23	Barley	cytosol	25.59	21.27
TraesCS5B01G291600.1	Wheat	cytosol, extracellular	25.59	21.25
TraesCS3B01G081500.2	Wheat	cytosol	25.47	21.22
TraesCS3B01G083600.1	Wheat	cytosol	24.76	21.11
TraesCS3B01G081600.1	Wheat	cytosol	25.24	21.06
TraesCS3B01G083500.1	Wheat	cytosol	25.24	21.06
TraesCS3A01G073800.1	Wheat	cytosol	24.53	21.03
GSMUA_Achr10P...	Banana	cytosol	26.65	21.02
TraesCS3A01G069300.1	Wheat	cytosol	25.0	21.01
KXG29105	Sorghum	cytosol	25.24	21.0
TraesCS2B01G607700.1	Wheat	cytosol	25.0	20.99
GSMUA_Achr11P...	Banana	cytosol	25.59	20.99
TraesCS3B01G081700.1	Wheat	cytosol	25.0	20.97
TraesCS3B01G088200.1	Wheat	cytosol	24.41	20.95
TraesCS7A01G374100.1	Wheat	cytosol	24.65	20.94
HORVU3Hr1G013250.2	Barley	cytosol	24.41	20.93
GSMUA_AchrUn_...	Banana	cytosol	15.57	20.92
Os11t0674400-00	Rice	cytosol, plasma membrane	25.47	20.91
Os11t0623800-00	Rice	cytosol	25.94	20.87
TraesCS3A01G073700.1	Wheat	cytosol	24.29	20.87
TraesCS3D01G068100.1	Wheat	extracellular	25.12	20.86
GSMUA_Achr10P...	Banana	cytosol	26.06	20.83
TraesCS3A01G068200.1	Wheat	cytosol	25.0	20.83
TraesCS3D01G068800.1	Wheat	cytosol	24.17	20.81
TraesCS3A01G068900.1	Wheat	cytosol	8.61	20.8
GSMUA_Achr9P20610_001	Banana	cytosol	26.06	20.77
KXG39005	Sorghum	cytosol	25.24	20.6
TraesCS5A01G292200.1	Wheat	cytosol	24.76	20.57
HORVU5Hr1G122310.2	Barley	cytosol	21.7	20.54
TraesCS3D01G073600.1	Wheat	cytosol, mitochondrion, plasma membrane	18.51	20.52
HORVU3Hr1G012340.8	Barley	cytosol	16.86	20.49
GSMUA_Achr1P12550_001	Banana	cytosol	25.59	20.45
TraesCS3A01G069800.2	Wheat	cytosol	22.52	20.45
TraesCS3B01G485200.1	Wheat	cytosol	23.58	20.37
TraesCS3B01G485300.1	Wheat	cytosol	23.58	20.37
GSMUA_Achr10P...	Banana	cytosol	25.35	20.36
TraesCS3B01G082800.2	Wheat	cytosol	24.53	20.33
TraesCS3B01G083800.1	Wheat	cytosol	16.51	20.32
OQU89955	Sorghum	cytosol	25.83	20.32
Os07t0481400-01	Rice	cytosol	25.83	20.28
TraesCS7A01G557700.2	Wheat	cytosol	26.06	20.26
HORVU3Hr1G012880.4	Barley	cytosol	16.39	20.23
HORVU7Hr1G120540.3	Barley	cytosol	26.3	20.16
TraesCS3A01G068800.1	Wheat	cytosol, extracellular	24.17	20.16
KXG20980	Sorghum	cytosol	25.47	20.15
TraesCS7B01G482300.1	Wheat	cytosol, plastid	25.94	20.11
TraesCS5A01G181200.1	Wheat	mitochondrion	23.11	20.1
TraesCS5B01G178900.1	Wheat	cytosol	22.88	19.94
OQU80132	Sorghum	cytosol	23.0	19.92
TraesCS3D01G073500.1	Wheat	cytosol	21.11	19.89
TraesCS7D01G552700.1	Wheat	cytosol	25.59	19.87
GSMUA_Achr10P...	Banana	cytosol	25.0	19.87
TraesCS5D01G185600.1	Wheat	cytosol	24.53	19.85
Zm00001d014876_P005	Maize	cytosol	25.0	19.76
HORVU3Hr1G012660.4	Barley	cytosol	24.06	19.54
Zm00001d021492_P002	Maize	cytosol	24.88	19.52
Os02t0456800-01	Rice	cytosol	25.0	19.47
TraesCS3B01G082900.1	Wheat	cytosol	6.25	19.34
HORVU0Hr1G039660.8	Barley	cytosol	23.82	19.24
HORVU3Hr1G012860.1	Barley	cytosol	22.05	19.18
OQU84002	Sorghum	cytosol	14.15	19.08
Os09t0313600-00	Rice	plasma membrane	23.35	18.98
TraesCS3B01G082200.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	21.34	18.91
TraesCS3B01G082000.1	Wheat	cytosol	6.25	18.86
Zm00001d035129_P001	Maize	plasma membrane	23.23	18.66
EER97218	Sorghum	mitochondrion, plasma membrane	23.94	18.19
Zm00001d021491_P001	Maize	cytosol, plasma membrane	23.7	18.06
HORVU3Hr1G012620.2	Barley	cytosol	10.02	17.86
Os07t0481300-01	Rice	cytosol	22.88	17.29
GSMUA_AchrUn_...	Banana	cytosol	6.25	17.21
Os09t0313500-01	Rice	plasma membrane	22.17	17.17
GSMUA_AchrUn_...	Banana	cytosol	11.56	16.84
TraesCS7B01G491900.1	Wheat	mitochondrion	3.89	16.42
GSMUA_AchrUn_...	Banana	plasma membrane	27.71	16.32
Os11t0673600-00	Rice	cytosol, plasma membrane	9.43	16.19
TraesCS5A01G181400.1	Wheat	plastid	20.64	16.14
TraesCS5B01G179100.1	Wheat	plastid	20.4	15.96
Os11t0677000-00	Rice	cytosol	8.25	15.84
TraesCS5D01G185700.1	Wheat	plastid	20.05	15.68
Zm00001d035125_P001	Maize	cytosol, mitochondrion, plasma membrane	22.17	14.86
GSMUA_Achr10P...	Banana	cytosol	6.13	14.81
Os11t0675200-00	Rice	cytosol	5.31	13.51
HORVU5Hr1G055260.1	Barley	mitochondrion, plasma membrane	8.84	13.46
Os11t0677101-00	Rice	plasma membrane	6.37	13.43
HORVU1Hr1G040540.18	Barley	mitochondrion	23.11	12.97
Zm00001d032724_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion, plastid	22.76	12.93
TraesCS1A01G152300.1	Wheat	cytosol	20.87	12.79
TraesCS1D01G149200.1	Wheat	cytosol	20.87	12.79
KXG38346	Sorghum	nucleus	22.76	12.66
GSMUA_AchrUn_...	Banana	cytosol	4.48	11.21
TraesCS6B01G070000.1	Wheat	cytosol	0.0	0.0
TraesCSU01G061600.1	Wheat	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.8.430	EntrezGene:102592178	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150
GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	UniProt:M0ZVK0	InterPro:NB-ARC	InterPro:P-loop_NTPase
PFAM:PF00931	EnsemblPlantsGene:PGSC0003DMG400003527	PGSC:PGSC0003DMG400003527	EnsemblPlants:PGSC0003DMT400009065	PRINTS:PR00364	PANTHER:PTHR23155
PANTHER:PTHR23155:SF759	InterPro:RX-like_CC	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI000295E83E	RefSeq:XP_006340661.1
SEG:seg	:	:	:	:	:

Description

Disease resistance protein RGA2 [Source:PGSC_GENE;Acc:PGSC0003DMG400003527]

Coordinates

chr2:-:40130775..40133828

Molecular Weight (calculated)

96639.0 Da

IEP (calculated)

7.045

GRAVY (calculated)

-0.235

Length

848 amino acids

Sequence
(BLAST)

001: MVDAVVTVFL EKLLNVLTEE SRFLSQHRQQ FEKLKNELLF MQSFLKDAER LKRKHTTLKT VMACLRDLIF EAEEILEDCQ NQSADSDGSN RFSTRLHPKR
101: LSHRHQTGKR LAEINDKISE IKQNISTYLR VPLMNEGSME AHDNLMTRWT SSLYDHTQVV GLEGDTEKIK DWLFEASDGL LAIAFVGMGG LGKTTLAQKV
201: FNERSMENHF ERRIWVSVSQ TFTEEQVMRS ILKSLGDACI GDDQSELLRK INQYLLGKRF LIVMDDVWSL DNAWWQKIYS GLPKGNGSSV IVTTRNELVA
301: RKMGVTEART HWPKFLNEHY SWLLFRKIAF AATAGECNFP DLEDVGKEIV EKCKGLPLAI KAVGGVMLCK PPYYHEWVRI ANHFRDELKE NDDSVMASLQ
401: LSYDELPPYL KSCFLCFSLF PEDCVILKDQ LIRWWIGESF IPLRSGRLST EVGEDCFSQL SNRCLIEVVD KAYNGVIHTC KMHDMVRDLV IKIADDDSFS
501: TPSDANCRHL GISSAMNGKK LLSNRKLRAL LTNTKSGEVN KIPSDIAKKF CNSRHLQVLD LSKSIFNVPL SSLLEGIGSA KQLTYLSLSN THPLIGVPDS
601: ISNLEKLQIL DFSYCQNMKM LPSCVLTFVE LAVLDLNHCG SLEYLPKGLS RLSNLQVLLG FKPAKLSQPG GCRISELRSL TRLRRLSLRL TQDEEIGDDE
701: GNALIGLQEL QFLTISCFDS QDDGLVTKLG KLYPPRQLHE LILKFYPGKV SPEWLNPKSL PMLRYMSIIS GDMKEMHENF WGDRSTVWKI EGLMLEALTD
801: LRLEWSAVNR VMPSLRILKA SWCPELEAFP IEDAGFRGGL WKKEEHRC

Best Arabidopsis Sequence Match ( AT3G50950.1 )
(BLAST)

001: MVDAVVTVFL EKTLNILEEK GRTVSDYRKQ LEDLQSELKY MQSFLKDAER QKRTNETLRT LVADLRELVY EAEDILVDCQ LADGDDGNEQ RSSNAWLSRL
101: HPARVPLQYK KSKRLQEINE RITKIKSQVE PYFEFITPSN VGRDNGTDRW SSPVYDHTQV VGLEGDKRKI KEWLFRSNDS QLLIMAFVGM GGLGKTTIAQ
201: EVFNDKEIEH RFERRIWVSV SQTFTEEQIM RSILRNLGDA SVGDDIGTLL RKIQQYLLGK RYLIVMDDVW DKNLSWWDKI YQGLPRGQGG SVIVTTRSES
301: VAKRVQARDD KTHRPELLSP DNSWLLFCNV AFAANDGTCE RPELEDVGKE IVTKCKGLPL TIKAVGGLLL CKDHVYHEWR RIAEHFQDEL RGNTSETDNV
401: MSSLQLSYDE LPSHLKSCIL TLSLYPEDCV IPKQQLVHGW IGEGFVMWRN GRSATESGED CFSGLTNRCL IEVVDKTYSG TIITCKIHDM VRDLVIDIAK
501: KDSFSNPEGL NCRHLGISGN FDEKQIKVNH KLRGVVSTTK TGEVNKLNSD LAKKFTDCKY LRVLDISKSI FDAPLSEILD EIASLQHLAC LSLSNTHPLI
601: QFPRSMEDLH NLQILDASYC QNLKQLQPCI VLFKKLLVLD MTNCGSLECF PKGIGSLVKL EVLLGFKPAR SNNGCKLSEV KNLTNLRKLG LSLTRGDQIE
701: EEELDSLINL SKLMSISINC YDSYGDDLIT KIDALTPPHQ LHELSLQFYP GKSSPSWLSP HKLPMLRYMS ICSGNLVKMQ EPFWGNENTH WRIEGLMLSS
801: LSDLDMDWEV LQQSMPYLRT VTANWCPELE SFAIEDVGFR GGVWMKTPLH RT

Arabidopsis Description

RPP13L4Disease resistance RPP13-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q38834]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.