Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- endoplasmic reticulum 1
- plasma membrane 1
- vacuole 1
- golgi 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 90.82 | 78.48 |
| GSMUA_Achr10P... | Banana | cytosol | 88.55 | 65.98 |
| GSMUA_Achr10P... | Banana | cytosol | 84.65 | 62.6 |
| GSMUA_Achr1P12540_001 | Banana | cytosol | 38.24 | 50.92 |
| GSMUA_Achr10P... | Banana | cytosol | 66.92 | 50.14 |
| GSMUA_Achr10P... | Banana | cytosol | 64.78 | 48.77 |
| GSMUA_Achr11P... | Banana | cytosol | 60.13 | 46.23 |
| GSMUA_Achr2P03610_001 | Banana | cytosol | 49.94 | 38.51 |
| GSMUA_AchrUn_... | Banana | cytosol | 12.33 | 37.84 |
| GSMUA_Achr1P12550_001 | Banana | cytosol | 49.94 | 37.42 |
| GSMUA_Achr9P20610_001 | Banana | cytosol | 49.94 | 37.31 |
| GSMUA_Achr3P27817_001 | Banana | cytosol | 11.45 | 31.49 |
| GSMUA_Achr2P11320_001 | Banana | cytosol | 39.62 | 30.91 |
| Zm00001d014876_P005 | Maize | cytosol | 41.01 | 30.38 |
| GSMUA_Achr1P14030_001 | Banana | cytosol | 40.13 | 30.24 |
| GSMUA_AchrUn_... | Banana | cytosol, plasma membrane | 30.19 | 30.23 |
| KXG20980 | Sorghum | cytosol | 40.13 | 29.76 |
| GSMUA_AchrUn_... | Banana | cytosol | 21.76 | 29.73 |
| GSMUA_Achr1P14020_001 | Banana | cytosol | 37.86 | 29.2 |
| TraesCS7D01G552700.1 | Wheat | cytosol | 39.62 | 28.85 |
| Os02t0456800-01 | Rice | cytosol | 39.5 | 28.83 |
| TraesCS7A01G557700.2 | Wheat | cytosol | 39.37 | 28.69 |
| TraesCS7B01G482300.1 | Wheat | cytosol, plastid | 39.37 | 28.61 |
| HORVU7Hr1G120540.3 | Barley | cytosol | 39.12 | 28.12 |
| GSMUA_Achr9P23050_001 | Banana | cytosol | 36.6 | 26.77 |
| GSMUA_Achr3P28030_001 | Banana | plasma membrane | 36.1 | 26.57 |
| GSMUA_AchrUn_... | Banana | cytosol | 22.89 | 26.45 |
| GSMUA_Achr3P27810_001 | Banana | cytosol, endoplasmic reticulum | 28.68 | 26.0 |
| GSMUA_Achr3P27790_001 | Banana | cytosol | 29.43 | 25.83 |
| PGSC0003DMT400079012 | Potato | cytosol | 4.91 | 24.84 |
| GSMUA_AchrUn_... | Banana | cytosol | 22.52 | 24.83 |
| GSMUA_AchrUn_... | Banana | cytosol | 17.86 | 24.52 |
| GSMUA_Achr3P27830_001 | Banana | cytosol, peroxisome | 24.65 | 24.47 |
| GSMUA_AchrUn_... | Banana | cytosol | 19.12 | 24.09 |
| VIT_04s0023g02380.t01 | Wine grape | cytosol | 24.91 | 23.29 |
| PGSC0003DMT400009065 | Potato | cytosol | 24.65 | 23.11 |
| PGSC0003DMT400067280 | Potato | cytosol, mitochondrion | 25.66 | 23.1 |
| Solyc07g053010.1.1 | Tomato | cytosol | 25.53 | 23.09 |
| PGSC0003DMT400067354 | Potato | cytosol | 25.16 | 22.86 |
| Solyc02g084890.1.1 | Tomato | cytosol, extracellular, nucleus | 24.4 | 22.82 |
| Solyc07g053020.1.1 | Tomato | cytosol | 24.4 | 22.77 |
| AT3G50950.1 | Thale cress | cytosol | 24.4 | 22.77 |
| GSMUA_Achr10P... | Banana | cytosol | 8.81 | 19.94 |
| GSMUA_AchrUn_... | Banana | cytosol | 7.67 | 19.81 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 34.97 | 19.31 |
| CDX73766 | Canola | plastid | 25.41 | 15.65 |
| Bra036845.1-P | Field mustard | plastid | 25.28 | 15.57 |
| GSMUA_AchrUn_... | Banana | cytosol | 4.53 | 10.62 |
Protein Annotations
| Gene3D:1.10.8.430 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0043531 | EnsemblPlantsGene:GSMUA_Achr10G07080_001 | EnsemblPlants:GSMUA_Achr10P07080_001 |
| EnsemblPlants:GSMUA_Achr10T07080_001 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp |
| UniProt:M0RG36 | InterPro:NB-ARC | InterPro:P-loop_NTPase | PFAM:PF00931 | PFAM:PF13855 | PRINTS:PR00364 |
| PANTHER:PTHR44518 | InterPro:RX-like_CC | SMART:SM00369 | SUPFAM:SSF52047 | SUPFAM:SSF52540 | UniParc:UPI0002962540 |
| SEG:seg | : | : | : | : | : |
Description
Putative disease resistance protein RGA1 [Source:GMGC_GENE;Acc:GSMUA_Achr10G07080_001]
Coordinates
chr10:+:17294401..17296785
Molecular Weight (calculated)
90100.8 Da
IEP (calculated)
5.325
GRAVY (calculated)
-0.253
Length
795 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMILDTFVS RYVNDVAAFV EGEICKVLGV KKEIKALQET LETIRCFLQD AEKKSRSGDP VMELWVRKLK EVMYDADDVI DLCVMEGGKP LEVRASASAS
101: GVVSLPFSFV SSCFRCTKYR HEIAGQIEAI NDGLKRIAAD NSILGNLQPA SQQLHPKKPP PPRETSPLEV EEDIVGEQIE EAADDLINRM LENTEQKCRV
201: FGIVGMGGIG KTTLASKIYN DGRIKENFPI QKWLYISKDY TEIKFLRELI RCAGDETKAG SFEGESRAEL ELKLASLLTE NLFLVLDDVW SPNVWTDFLR
301: KPLSKGEGSR TILVTTRIET VLSGMKASYM HHAEKMDDNS GWMLLGKTVF EAGEEDDMRR LEEVGRKIVR KCDGLPLAIK AIAGVLISKD RSTAEWEQVL
401: ENDAWSTNRQ IDEEVPRALH LSYEDLPSHL KQCFLYCSFF VWEFFHYNDI IRFWVAEGLI VEAGGRLMED VAEEYYWELV SRNLLQVDPS YINRSMFCIH
501: DHLRALATYL MKEEGFSITV GQRLDIKANM KIRRLSISNM GIKLVLPDHI IEEKCLRTLM IRDSLSSKII EDNLLKGLSN LRVLDLCDTS VERIPNCIGD
601: LLHLRYLDLD RTKIHEIPES IGCLVNLQTL NISGCKHLYK LPMTITRLYN LRSLRVEDTP LTHVPKGIGK LININNLKGF VVGHDNPTNE VDEAGCGLEE
701: LQPLSKLRYL SIYRLERAVT AASALAEKRS LKELILSWMP PEDGEDGDGT DRGEDRRATT WRKEEQIQTG AGKICNELSP PSSLRTLFIE KFPGR
101: GVVSLPFSFV SSCFRCTKYR HEIAGQIEAI NDGLKRIAAD NSILGNLQPA SQQLHPKKPP PPRETSPLEV EEDIVGEQIE EAADDLINRM LENTEQKCRV
201: FGIVGMGGIG KTTLASKIYN DGRIKENFPI QKWLYISKDY TEIKFLRELI RCAGDETKAG SFEGESRAEL ELKLASLLTE NLFLVLDDVW SPNVWTDFLR
301: KPLSKGEGSR TILVTTRIET VLSGMKASYM HHAEKMDDNS GWMLLGKTVF EAGEEDDMRR LEEVGRKIVR KCDGLPLAIK AIAGVLISKD RSTAEWEQVL
401: ENDAWSTNRQ IDEEVPRALH LSYEDLPSHL KQCFLYCSFF VWEFFHYNDI IRFWVAEGLI VEAGGRLMED VAEEYYWELV SRNLLQVDPS YINRSMFCIH
501: DHLRALATYL MKEEGFSITV GQRLDIKANM KIRRLSISNM GIKLVLPDHI IEEKCLRTLM IRDSLSSKII EDNLLKGLSN LRVLDLCDTS VERIPNCIGD
601: LLHLRYLDLD RTKIHEIPES IGCLVNLQTL NISGCKHLYK LPMTITRLYN LRSLRVEDTP LTHVPKGIGK LININNLKGF VVGHDNPTNE VDEAGCGLEE
701: LQPLSKLRYL SIYRLERAVT AASALAEKRS LKELILSWMP PEDGEDGDGT DRGEDRRATT WRKEEQIQTG AGKICNELSP PSSLRTLFIE KFPGR
0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
Arabidopsis Description
Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.