Factsheet for GSMUA_AchrUn_randomP27050_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	31.54	83.78
GSMUA_AchrUn_...	Banana	cytosol	38.08	77.29
GSMUA_AchrUn_...	Banana	cytosol	63.66	75.65
GSMUA_AchrUn_...	Banana	cytosol	69.33	75.59
GSMUA_Achr3P27830_001	Banana	cytosol, peroxisome	77.33	66.42
GSMUA_Achr3P27810_001	Banana	cytosol, endoplasmic reticulum	81.1	63.63
GSMUA_Achr3P27790_001	Banana	cytosol	82.99	63.02
GSMUA_AchrUn_...	Banana	cytosol	24.56	54.87
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane	61.19	53.02
GSMUA_Achr3P28030_001	Banana	plasma membrane	80.96	51.57
GSMUA_Achr3P27817_001	Banana	cytosol	20.49	48.79
GSMUA_AchrUn_...	Banana	cytosol	40.7	38.84
GSMUA_AchrUn_...	Banana	plasma membrane	73.84	35.28
GSMUA_Achr9P23050_001	Banana	cytosol	53.78	34.04
GSMUA_Achr2P11320_001	Banana	cytosol	38.66	26.1
GSMUA_AchrUn_...	Banana	cytosol	20.93	24.74
GSMUA_Achr1P14020_001	Banana	cytosol	36.48	24.35
GSMUA_Achr1P14030_001	Banana	cytosol	37.06	24.17
GSMUA_Achr11P...	Banana	cytosol	36.05	23.98
GSMUA_Achr10P...	Banana	cytosol	31.83	23.8
GSMUA_Achr10P...	Banana	cytosol	12.06	23.65
HORVU5Hr1G055260.1	Barley	mitochondrion, plasma membrane	18.75	23.16
GSMUA_Achr10P...	Banana	cytosol	36.05	23.07
GSMUA_Achr10P...	Banana	cytosol	26.45	22.89
TraesCS6B01G070200.1	Wheat	cytosol	29.94	22.56
GSMUA_Achr10P...	Banana	cytosol	34.74	22.4
GSMUA_Achr2P03610_001	Banana	cytosol	33.43	22.31
GSMUA_Achr10P...	Banana	cytosol	34.16	22.15
GSMUA_Achr9P20610_001	Banana	cytosol	34.16	22.09
GSMUA_Achr1P12550_001	Banana	cytosol	34.01	22.05
TraesCS1B01G169700.1	Wheat	cytosol	29.65	21.89
GSMUA_Achr10P...	Banana	cytosol	32.99	21.5
TraesCS5A01G181200.1	Wheat	mitochondrion	29.8	21.03
EER97218	Sorghum	mitochondrion, plasma membrane	34.01	20.97
TraesCS5B01G178900.1	Wheat	cytosol	29.36	20.76
Zm00001d021491_P001	Maize	cytosol, plasma membrane	33.43	20.66
OQU89955	Sorghum	cytosol	31.54	20.13
Os07t0481400-01	Rice	cytosol	31.4	20.0
Zm00001d021492_P002	Maize	cytosol	31.25	19.89
PGSC0003DMT400079012	Potato	cytosol	4.51	19.75
TraesCS5D01G185600.1	Wheat	cytosol	29.65	19.47
Os09t0313600-00	Rice	plasma membrane	29.51	19.46
Os07t0481300-01	Rice	cytosol	31.69	19.43
Os09t0313500-01	Rice	plasma membrane	30.81	19.36
HORVU0Hr1G039660.8	Barley	cytosol	29.36	19.24
Solyc07g053020.1.1	Tomato	cytosol	22.97	18.54
TraesCS7B01G491900.1	Wheat	mitochondrion	5.38	18.41
TraesCS5A01G181400.1	Wheat	plastid	28.63	18.17
TraesCS5D01G185700.1	Wheat	plastid	28.63	18.17
PGSC0003DMT400009065	Potato	cytosol	22.38	18.16
GSMUA_Achr1P12540_001	Banana	cytosol	15.7	18.09
TraesCS5B01G179100.1	Wheat	plastid	28.49	18.08
VIT_04s0023g02380.t01	Wine grape	cytosol	22.09	17.88
PGSC0003DMT400067354	Potato	cytosol	22.53	17.71
Solyc02g084890.1.1	Tomato	cytosol, extracellular, nucleus	21.8	17.65
AT3G50950.1	Thale cress	cytosol	21.66	17.49
PGSC0003DMT400067280	Potato	cytosol, mitochondrion	21.8	16.99
Solyc07g053010.1.1	Tomato	cytosol	21.66	16.95
TraesCS1D01G149200.1	Wheat	cytosol	32.7	16.26
TraesCS1A01G152300.1	Wheat	cytosol	32.56	16.18
Zm00001d035125_P001	Maize	cytosol, mitochondrion, plasma membrane	29.65	16.13
Zm00001d035129_P001	Maize	plasma membrane	23.98	15.62
HORVU1Hr1G040540.18	Barley	mitochondrion	32.85	14.96
Zm00001d032724_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion, plastid	31.69	14.6
KXG38346	Sorghum	nucleus	31.4	14.17
CDX73766	Canola	plastid	21.51	11.46
Bra036845.1-P	Field mustard	plastid	21.51	11.46
TraesCS6B01G070000.1	Wheat	cytosol	2.47	3.79

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0043531	EnsemblPlantsGene:GSMUA_AchrUn_randomG27050_001	EnsemblPlants:GSMUA_AchrUn_randomP27050_001	EnsemblPlants:GSMUA_AchrUn_randomT27050_001	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M0UCR3	InterPro:NB-ARC	InterPro:P-loop_NTPase
PFAM:PF00931	PFAM:PF13855	PRINTS:PR00364	PANTHER:PTHR44518	SUPFAM:SSF52058	SUPFAM:SSF52540
UniParc:UPI000294BEEC	SEG:seg	:	:	:	:

Description

NBS-LRR disease resistance protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG27050_001]

Coordinates

chrchrUn_random:+:132387068..132389425

Molecular Weight (calculated)

77415.7 Da

IEP (calculated)

7.167

GRAVY (calculated)

-0.158

Length

688 amino acids

Sequence
(BLAST)

001: ARIWDDLLRN PLQGGAAGSR VLVTTRNAGI ARQMKAAHVH EMKLLPPEDG WSLLCKKATM NAVEERDAQD LKDTGMKIVE KCGGLPLAIK TIGGVLCTRG
101: LNRNAWEEVL RSAAWSRTGL PEGVHGALYL SYQDLPSHLK QCFLYCALFK EDYMFHGPEI VRLWIAEGFV EARGDVSLEE TGEQYYIELH HRCLLQSLQP
201: FNDSLCISDV QNEWRSGAAS MKLRRLSIVA TETTDIQHIV NDYLKNFVRL RVLHLTYTKI ENLPHYIGSL IHLRYLNVSC SDITELPESI CNLTNLQFLI
301: LRGCDQLRHI PQGMARLFNL RVLDCTYTRL ESLPCGIGRL KHLNELGGFV MNMANGTCPL EELGSLDELR YLSIYNLERA CMEAEPGRDT SVLKGKQKLK
401: NLHLHCSSTP TSDGHTEEQI EIIEKVLDVA LHPPSSVVSL SLHNFFGLRY PSWMASASIS KLPSLEFLKI GGARAHPSSS SSSSPPLMLF PRLRQLRLAD
501: MINMQVWDWV AEGFAMGRLN KLVLKNCPKL KSLPEGLIRQ ATCLNTLYLT DVCALKSIKG FPSVKELKLS GESDLEIVAD LPALEVLYLG LFGSRNNRLP
601: EWLAQQSFTT FQRLDVSGTT QQLVRCLQNG ADWPIVKHFP IFSIEDLRGN YINYNKHSCT FDTNLVDDDA VFAAVAAAEE EEKRRRHQ

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.