Factsheet for GSMUA_Achr9P23050_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	14.81	62.16
GSMUA_Achr3P27817_001	Banana	cytosol	16.01	60.21
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane	42.13	57.68
GSMUA_Achr3P27810_001	Banana	cytosol, endoplasmic reticulum	46.37	57.47
GSMUA_Achr3P28030_001	Banana	plasma membrane	55.93	56.3
GSMUA_Achr3P27790_001	Banana	cytosol	46.55	55.85
GSMUA_Achr3P27830_001	Banana	cytosol, peroxisome	40.29	54.68
GSMUA_AchrUn_...	Banana	cytosol	36.06	54.37
GSMUA_AchrUn_...	Banana	cytosol	28.89	54.23
GSMUA_AchrUn_...	Banana	cytosol	34.04	53.78
GSMUA_AchrUn_...	Banana	cytosol	31.0	53.41
GSMUA_AchrUn_...	Banana	cytosol	14.44	46.31
GSMUA_AchrUn_...	Banana	cytosol	12.24	43.18
GSMUA_Achr2P11320_001	Banana	cytosol	37.44	39.94
GSMUA_Achr1P12540_001	Banana	cytosol	21.44	39.03
GSMUA_Achr10P...	Banana	cytosol	32.38	38.26
TraesCS6B01G070200.1	Wheat	cytosol	31.55	37.57
GSMUA_Achr1P14020_001	Banana	cytosol	35.05	36.95
GSMUA_Achr10P...	Banana	cytosol	26.77	36.6
GSMUA_AchrUn_...	Banana	plasma membrane	47.93	36.18
GSMUA_Achr1P14030_001	Banana	cytosol	34.96	36.02
GSMUA_Achr2P03610_001	Banana	cytosol	33.95	35.79
GSMUA_Achr10P...	Banana	cytosol	35.05	35.44
GSMUA_Achr1P12550_001	Banana	cytosol	34.22	35.06
GSMUA_Achr10P...	Banana	cytosol	34.04	34.68
TraesCS1B01G169700.1	Wheat	cytosol	29.25	34.12
GSMUA_Achr11P...	Banana	cytosol	32.29	33.95
GSMUA_Achr10P...	Banana	cytosol	32.84	33.65
GSMUA_Achr10P...	Banana	cytosol	32.57	33.52
GSMUA_Achr9P20610_001	Banana	cytosol	32.2	32.89
GSMUA_AchrUn_...	Banana	cytosol	16.74	31.27
Os07t0481400-01	Rice	cytosol	29.71	29.91
OQU89955	Sorghum	cytosol	29.53	29.78
Zm00001d021492_P002	Maize	cytosol	29.53	29.69
EER97218	Sorghum	mitochondrion, plasma membrane	29.44	28.67
PGSC0003DMT400009065	Potato	cytosol	22.08	28.3
Os07t0481300-01	Rice	cytosol	29.16	28.25
TraesCS5D01G185600.1	Wheat	cytosol	27.23	28.24
Zm00001d021491_P001	Maize	cytosol, plasma membrane	28.89	28.21
HORVU0Hr1G039660.8	Barley	cytosol	27.14	28.1
TraesCS5B01G178900.1	Wheat	cytosol	25.11	28.06
TraesCS5A01G181200.1	Wheat	mitochondrion	25.11	28.0
Solyc02g084890.1.1	Tomato	cytosol, extracellular, nucleus	21.8	27.88
AT3G50950.1	Thale cress	cytosol	21.71	27.7
Os09t0313500-01	Rice	plasma membrane	27.69	27.49
VIT_04s0023g02380.t01	Wine grape	cytosol	21.44	27.41
GSMUA_Achr10P...	Banana	cytosol	8.74	27.07
Solyc07g053020.1.1	Tomato	cytosol	20.88	26.64
TraesCS5A01G181400.1	Wheat	plastid	26.31	26.38
Os09t0313600-00	Rice	plasma membrane	25.3	26.37
TraesCS5D01G185700.1	Wheat	plastid	26.22	26.29
PGSC0003DMT400067354	Potato	cytosol	20.98	26.06
TraesCS5B01G179100.1	Wheat	plastid	25.94	26.01
Solyc07g053010.1.1	Tomato	cytosol	20.61	25.48
PGSC0003DMT400067280	Potato	cytosol, mitochondrion	20.52	25.25
HORVU5Hr1G055260.1	Barley	mitochondrion, plasma membrane	12.88	25.13
TraesCS7B01G491900.1	Wheat	mitochondrion	4.51	24.38
Zm00001d035129_P001	Maize	plasma membrane	23.0	23.67
Zm00001d032724_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion, plastid	30.17	21.97
Zm00001d035125_P001	Maize	cytosol, mitochondrion, plasma membrane	25.21	21.66
KXG38346	Sorghum	nucleus	29.9	21.33
PGSC0003DMT400079012	Potato	cytosol	3.04	21.02
TraesCS1D01G149200.1	Wheat	cytosol	25.48	20.01
HORVU1Hr1G040540.18	Barley	mitochondrion	27.78	19.99
TraesCS1A01G152300.1	Wheat	cytosol	25.3	19.87
CDX73766	Canola	plastid	21.44	18.05
Bra036845.1-P	Field mustard	plastid	21.44	18.05
TraesCS6B01G070000.1	Wheat	cytosol	1.93	4.69

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0043531	EnsemblPlantsGene:GSMUA_Achr9G23050_001	EnsemblPlants:GSMUA_Achr9P23050_001	EnsemblPlants:GSMUA_Achr9T23050_001	InterPro:IPR001611
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M0U2R4	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931
PFAM:PF13855	PRINTS:PR00364	PFscan:PS51450	PANTHER:PTHR44518	InterPro:RX-like_CC	SMART:SM00369
SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI00029577E4	SEG:seg	:	:

Description

disease resistance RPP13-like protein 1, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G23050_001]

Coordinates

chr9:-:28045686..28048949

Molecular Weight (calculated)

122624.0 Da

IEP (calculated)

6.885

GRAVY (calculated)

-0.244

Length

1087 amino acids

Sequence
(BLAST)

0001: MVVEAFVSGL LNALGDLAME EADALLGVPG EIQRLQRTLR TIRHVLRDAE RRRIEDEAID DWLRELKDAM YDADDILDEC RVQAEKKPTA RAGARKRRRF
0101: SWFSGFGRQV ELTHEIGVRI RDLNRRLEEI SARRTAFDLR VYSDRKPTSR VSRKTSPVLE SDIVGTGMEE DARDLVELLT KEDTRSNVLA LAVVGIGGIG
0201: KTTLAQKVFH DDRTKASFRR SMWVCVSQEF VESDVLRDII AGAGGSDGGA RSRALLEPVV ESLLRGNKFL LVLDDVWSEY IWEDLLRNPL QGGAAGSRVL
0301: VTTRNEGIAR RMKAVHIHRM KLLPLHDGWS LLCKKVAHGD DEERDARSIA DIGLKIVEKC DGLPLAIKTI GGVLCTKGLS RRAWEQVLRS AAWSQTGLPE
0401: GVKGALYLSY EDLPSQLKQC FLYCAMFPED YIHLRQYLIQ FWIAEGFVQA AGDLTPEAAG EEYYRELIRR SLLQPHPMYH DQFGCTMHDL LRSLAHFLTR
0501: DESLFVKDVQ QGWKSAASAK LRRVSVIAPG TQRIQPILDA IKKQESVRTL LLERTSVSET DVDDHLRKLT RLRVLHLADT RILGLPQHIG ELIHLRYLDL
0601: SDCHIRELPE SIGNLVNLQY LILNRSRISN LPKSVVKLHN LRSLDLECVP VEGFPSGIGR LQHLNVLRGL VVNTGRAWCS LEEVSNLRRL RWLAISKLER
0701: AWAAAEPGEA AAKGLRNNQD LEWVEMHCSP CRADTAPPSF GYAEEEMERI ERVFDTALHP PSSLDKLEIQ HFFGRRYPTW LTTASVGLLL GNLRRLVLVD
0801: CRLCPLLPPL GKLPNLEFLR IRGASAVVAI GSEFLGCEAV GGKRRSSSPV SFPKLTELWF DGMINWEEWH WGVIGDDEVA VAMPRLSHLH LVDCPRLRDL
0901: PEALSCHATA LTRLQTKGVG SLKSICGFSS MKRMQIHDES GLESVSDLPA LEFLEVSNNK MSYLPKWLVT GLAQFTALQR LDIEGSSQLL RSCLQNGEEW
1001: PRLSHVPIVY IQDDQHKYIC YIKSSSTAYT NLKEHSDGHG KKVNEDQEQD MDDNHGNEAG EARLDSLMVY DTFLPPSYFI PVSSFLL

Best Arabidopsis Sequence Match ( AT3G50950.1 )
(BLAST)

001: MVDAVVTVFL EKTLNILEEK GRTVSDYRKQ LEDLQSELKY MQSFLKDAER QKRTNETLRT LVADLRELVY EAEDILVDCQ LADGDDGNEQ RSSNAWLSRL
101: HPARVPLQYK KSKRLQEINE RITKIKSQVE PYFEFITPSN VGRDNGTDRW SSPVYDHTQV VGLEGDKRKI KEWLFRSNDS QLLIMAFVGM GGLGKTTIAQ
201: EVFNDKEIEH RFERRIWVSV SQTFTEEQIM RSILRNLGDA SVGDDIGTLL RKIQQYLLGK RYLIVMDDVW DKNLSWWDKI YQGLPRGQGG SVIVTTRSES
301: VAKRVQARDD KTHRPELLSP DNSWLLFCNV AFAANDGTCE RPELEDVGKE IVTKCKGLPL TIKAVGGLLL CKDHVYHEWR RIAEHFQDEL RGNTSETDNV
401: MSSLQLSYDE LPSHLKSCIL TLSLYPEDCV IPKQQLVHGW IGEGFVMWRN GRSATESGED CFSGLTNRCL IEVVDKTYSG TIITCKIHDM VRDLVIDIAK
501: KDSFSNPEGL NCRHLGISGN FDEKQIKVNH KLRGVVSTTK TGEVNKLNSD LAKKFTDCKY LRVLDISKSI FDAPLSEILD EIASLQHLAC LSLSNTHPLI
601: QFPRSMEDLH NLQILDASYC QNLKQLQPCI VLFKKLLVLD MTNCGSLECF PKGIGSLVKL EVLLGFKPAR SNNGCKLSEV KNLTNLRKLG LSLTRGDQIE
701: EEELDSLINL SKLMSISINC YDSYGDDLIT KIDALTPPHQ LHELSLQFYP GKSSPSWLSP HKLPMLRYMS ICSGNLVKMQ EPFWGNENTH WRIEGLMLSS
801: LSDLDMDWEV LQQSMPYLRT VTANWCPELE SFAIEDVGFR GGVWMKTPLH RT

Arabidopsis Description

RPP13L4Disease resistance RPP13-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q38834]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.