Factsheet for GSMUA_AchrUn_randomP19310_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 1
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	20.91	64.09
GSMUA_AchrUn_...	Banana	cytosol	44.84	61.49
GSMUA_AchrUn_...	Banana	cytosol	55.79	61.44
GSMUA_AchrUn_...	Banana	cytosol	53.02	61.19
GSMUA_Achr3P27810_001	Banana	cytosol, endoplasmic reticulum	66.37	60.09
GSMUA_Achr3P27790_001	Banana	cytosol	68.26	59.82
GSMUA_Achr3P28030_001	Banana	plasma membrane	80.73	59.35
GSMUA_AchrUn_...	Banana	cytosol	46.98	59.11
GSMUA_Achr3P27817_001	Banana	cytosol	20.91	57.44
GSMUA_Achr3P27830_001	Banana	cytosol, peroxisome	57.18	56.68
GSMUA_AchrUn_...	Banana	cytosol	23.8	55.75
GSMUA_AchrUn_...	Banana	cytosol	20.03	51.62
GSMUA_Achr9P23050_001	Banana	cytosol	57.68	42.13
GSMUA_AchrUn_...	Banana	plasma membrane	69.77	38.47
GSMUA_Achr1P12540_001	Banana	cytosol	23.05	30.65
GSMUA_Achr2P11320_001	Banana	cytosol	39.04	30.42
GSMUA_Achr10P...	Banana	cytosol	30.23	30.19
GSMUA_Achr10P...	Banana	cytosol	33.75	29.13
GSMUA_Achr1P14020_001	Banana	cytosol	36.27	27.93
GSMUA_Achr11P...	Banana	cytosol	36.15	27.76
GSMUA_Achr1P14030_001	Banana	cytosol	36.65	27.58
TraesCS6B01G070200.1	Wheat	cytosol	31.36	27.27
GSMUA_Achr10P...	Banana	cytosol	36.78	27.16
GSMUA_Achr10P...	Banana	cytosol	36.02	26.8
GSMUA_Achr1P12550_001	Banana	cytosol	35.39	26.48
GSMUA_Achr10P...	Banana	cytosol	34.89	26.23
GSMUA_Achr9P20610_001	Banana	cytosol	35.01	26.13
GSMUA_Achr10P...	Banana	cytosol	34.76	26.01
TraesCS1B01G169700.1	Wheat	cytosol	30.35	25.86
GSMUA_Achr2P03610_001	Banana	cytosol	33.5	25.8
OQU89955	Sorghum	cytosol	31.36	23.1
Zm00001d021491_P001	Maize	cytosol, plasma membrane	31.86	22.73
Os09t0313500-01	Rice	plasma membrane	31.23	22.65
AT3G50950.1	Thale cress	cytosol	24.18	22.54
PGSC0003DMT400067354	Potato	cytosol	24.81	22.51
EER97218	Sorghum	mitochondrion, plasma membrane	31.61	22.49
VIT_04s0023g02380.t01	Wine grape	cytosol	24.06	22.47
Os07t0481400-01	Rice	cytosol	30.48	22.41
PGSC0003DMT400009065	Potato	cytosol	23.93	22.41
Solyc07g053020.1.1	Tomato	cytosol	23.93	22.3
Zm00001d021492_P002	Maize	cytosol	30.23	22.2
GSMUA_AchrUn_...	Banana	cytosol	16.12	21.99
Solyc02g084890.1.1	Tomato	cytosol, extracellular, nucleus	23.43	21.88
Os07t0481300-01	Rice	cytosol	30.73	21.75
TraesCS5D01G185600.1	Wheat	cytosol	28.21	21.37
TraesCS5A01G181200.1	Wheat	mitochondrion	26.2	21.33
TraesCS5B01G178900.1	Wheat	cytosol	25.82	21.07
HORVU0Hr1G039660.8	Barley	cytosol	27.83	21.05
Solyc07g053010.1.1	Tomato	cytosol	23.3	21.05
TraesCS5A01G181400.1	Wheat	plastid	28.72	21.03
PGSC0003DMT400079012	Potato	cytosol	4.16	21.02
TraesCS5D01G185700.1	Wheat	plastid	28.59	20.94
TraesCS5B01G179100.1	Wheat	plastid	28.46	20.85
HORVU5Hr1G055260.1	Barley	mitochondrion, plasma membrane	14.61	20.83
PGSC0003DMT400067280	Potato	cytosol, mitochondrion	23.05	20.72
Os09t0313600-00	Rice	plasma membrane	26.95	20.52
TraesCS7B01G491900.1	Wheat	mitochondrion	5.16	20.4
Zm00001d035125_P001	Maize	cytosol, mitochondrion, plasma membrane	28.97	18.18
Zm00001d035129_P001	Maize	plasma membrane	24.18	18.18
GSMUA_Achr10P...	Banana	cytosol	7.56	17.09
Zm00001d032724_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion, plastid	31.61	16.81
KXG38346	Sorghum	nucleus	32.24	16.8
HORVU1Hr1G040540.18	Barley	mitochondrion	29.22	15.35
TraesCS1A01G152300.1	Wheat	cytosol	26.32	15.1
TraesCS1D01G149200.1	Wheat	cytosol	26.2	15.03
Bra036845.1-P	Field mustard	plastid	24.18	14.87
CDX73766	Canola	plastid	24.06	14.79
TraesCS6B01G070000.1	Wheat	cytosol	2.52	4.46

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	EnsemblPlantsGene:GSMUA_AchrUn_randomG19310_001	EnsemblPlants:GSMUA_AchrUn_randomP19310_001	EnsemblPlants:GSMUA_AchrUn_randomT19310_001
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M0UAJ0	InterPro:NB-ARC	InterPro:P-loop_NTPase
PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR44518	InterPro:RX-like_CC	SMART:SM00369	SUPFAM:SSF52058
SUPFAM:SSF52540	UniParc:UPI000295EFB3	SEG:seg	:	:	:

Description

Putative disease resistance protein RGA1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG19310_001]

Coordinates

chrchrUn_random:-:93066947..93070593

Molecular Weight (calculated)

89409.3 Da

IEP (calculated)

5.735

GRAVY (calculated)

-0.075

Length

794 amino acids

Sequence
(BLAST)

001: MAVVLNPFVS KLLETLFDMA KEKVDLVLGV PGEIQKLQDT LCNIQSVLHD AEQRPIEDKA IKYWLTDLKN AMYDADDILD ECRTAAEKCT PGESRPKRME
101: EISARMSKLQ LHVSAAERKL VSRVSRITSP VMESDMVGQR LEEDAKGLVE QLTKQDPSKN VVVLAIVGVG GIGKTTLAQK VFNDGKIEAN FGTTIWVCVS
201: QEFSETDLLR NIFLLVLDDV WDAQIWDDLL RNPLQGGAAG SREERDAQDL KDTGMKIVKK CGGLPLAIKT IGGVLCTRGL NRNAWEEVLR SAAWSRTGLP
301: EGVHGALYLS YQDLPSHLKQ CLLYCALFRE DYEFHGPTIV RFWIAEGFVE ARGDVMLEET GEQYYRELLH RSLLQSQPFN LYYKNYSKMH DLWRSGAAPM
401: KLRRLSIVAT ETMDIRDIDI DDYLKNFVRL RVLHLMGTNI EILPHYIGNL IHLRYLNVSY SYVTELPESI CNLMNLQFLI LKGCNELTHI PQDIVKLVNL
501: RTLNFGGTQL ESLPYGIGRL KHLNVLRGFV VTTANGTCPL EVLGSLQGLR YLSICKLERA WMEGEPRWDT SVIEKVLDVA LHPPSSVVTL RLENFVGLRY
601: PSWMVSSCIS SLLPNIRRLE LIHCHYWPLL PPLGKLPSLE FLHIEGTLAV ATIGPEFFGC EAAATGFPSV KELSISGESD LEIVTDLPAL ELLKLGTFGS
701: RINHLPEWLA DCPACFTTLQ RLDVHGTTQL LRRCLQNGAY WPMIKHFPIF SIEDGRGNYI NYIKGSCIFD TNLVDTDAAF AAAAAEEEEE KRHQ

Best Arabidopsis Sequence Match ( AT3G14470.1 )
(BLAST)

0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD

Arabidopsis Description

RPPL1Putative disease resistance RPP13-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.