Factsheet for GSMUA_Achr10P07130_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	79.49	47.94
GSMUA_Achr10P...	Banana	cytosol	85.47	28.28
GSMUA_Achr10P...	Banana	cytosol	78.35	26.04
GSMUA_AchrUn_...	Banana	cytosol	21.37	22.12
GSMUA_Achr10P...	Banana	cytosol	61.25	20.0
GSMUA_Achr10P...	Banana	cytosol	60.11	19.78
GSMUA_Achr10P...	Banana	cytosol	47.01	17.93
GSMUA_Achr11P...	Banana	cytosol	47.86	16.25
GSMUA_AchrUn_...	Banana	cytosol	13.96	15.91
GSMUA_Achr9P20610_001	Banana	cytosol	45.58	15.04
GSMUA_Achr2P03610_001	Banana	cytosol	44.16	15.03
GSMUA_AchrUn_...	Banana	cytosol	26.21	14.58
GSMUA_AchrUn_...	Banana	cytosol	23.65	14.34
GSMUA_Achr1P12550_001	Banana	cytosol	43.3	14.33
Zm00001d014876_P005	Maize	cytosol	39.32	12.86
KXG20980	Sorghum	cytosol	39.03	12.78
TraesCS7A01G557700.2	Wheat	cytosol	39.6	12.74
TraesCS7B01G482300.1	Wheat	cytosol, plastid	39.6	12.71
TraesCS7D01G552700.1	Wheat	cytosol	39.32	12.64
Os02t0456800-01	Rice	cytosol	38.75	12.49
HORVU7Hr1G120540.3	Barley	cytosol	39.32	12.48
GSMUA_AchrUn_...	Banana	cytosol	23.65	12.06
GSMUA_Achr1P14020_001	Banana	cytosol	34.19	11.64
GSMUA_Achr3P27830_001	Banana	cytosol, peroxisome	26.5	11.61
GSMUA_Achr1P14030_001	Banana	cytosol	34.47	11.47
GSMUA_Achr3P27810_001	Banana	cytosol, endoplasmic reticulum	27.07	10.83
GSMUA_Achr2P11320_001	Banana	cytosol	29.91	10.3
GSMUA_Achr3P27790_001	Banana	cytosol	26.21	10.15
GSMUA_Achr10P...	Banana	cytosol	19.94	8.81
GSMUA_Achr9P23050_001	Banana	cytosol	27.07	8.74
GSMUA_Achr3P28030_001	Banana	plasma membrane	26.21	8.52
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane	17.09	7.56
PGSC0003DMT400009065	Potato	cytosol	14.81	6.13
VIT_04s0023g02380.t01	Wine grape	cytosol	14.81	6.12
Solyc02g084890.1.1	Tomato	cytosol, extracellular, nucleus	14.81	6.12
GSMUA_AchrUn_...	Banana	plasma membrane	24.5	5.97
PGSC0003DMT400067280	Potato	cytosol, mitochondrion	13.68	5.44
PGSC0003DMT400067354	Potato	cytosol	13.39	5.37
Solyc07g053010.1.1	Tomato	cytosol	13.39	5.35
Solyc07g053020.1.1	Tomato	cytosol	12.82	5.28
AT3G50950.1	Thale cress	cytosol	11.4	4.69
GSMUA_AchrUn_...	Banana	cytosol	9.12	4.44
Bra036845.1-P	Field mustard	plastid	13.68	3.72
CDX73766	Canola	plastid	13.39	3.64
PGSC0003DMT400079012	Potato	cytosol	0.85	1.91
GSMUA_Achr3P27817_001	Banana	cytosol	0.57	0.69
GSMUA_AchrUn_...	Banana	cytosol	0.0	0.0
GSMUA_Achr1P12540_001	Banana	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr10P07130_001	EnsemblPlants:GSMUA_Achr10T07130_001	EnsemblPlantsGene:GSMUA_Achr10G07130_001	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf
PANTHER:PTHR44518	SEG:seg	SUPFAM:SSF52047	UniParc:UPI000294C27F	UniProt:M0RG40	MapMan:35.1

Description

Putative NB-ARC domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G07130_001]

Coordinates

chr10:+:17367281..17368426

Molecular Weight (calculated)

40505.8 Da

IEP (calculated)

5.078

GRAVY (calculated)

-0.361

Length

351 amino acids

Sequence
(BLAST)

001: MNLNHLEGFV IGHSDPTNEL HEEGCDLEEL RALSKLRCLR IYRLERAVTR VSVFVDKTLL KELTLYWISP EEDGDDEGDD VTWTEQQFQA VEKLCDELSP
101: PSSLQDLTIR RFPGRQLPFW LMSTSLDKSF PNLAFLRFWY LKSCTELPPP GMLPLLKHLD VTGGEAIKTI GPEFLGRKFP GASAFPKLEH LEFDEMPNWE
201: EWSVWRMEEN GQGPHLKLFP NLKICKIIEC PKLRALPEGL SHATKLKELY LDSTQDLREI TNLRLNYKLE VKDNTMLNRI SNLSMKYLKV EDCPNLDYVE
301: NLDRLQQLVL ICPRQMKQLP QWLSTLFSSA KAFLPLSGAS ENWNCNATSC C

Best Arabidopsis Sequence Match ( AT3G14470.1 )
(BLAST)

0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD

Arabidopsis Description

RPPL1Putative disease resistance RPP13-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.