Factsheet for GSMUA_AchrUn_randomP27810_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	42.31	72.27
GSMUA_AchrUn_...	Banana	cytosol	76.34	70.05
GSMUA_AchrUn_...	Banana	cytosol	75.65	63.66
GSMUA_Achr3P27810_001	Banana	cytosol, endoplasmic reticulum	95.51	63.06
GSMUA_Achr3P27830_001	Banana	cytosol, peroxisome	78.58	56.8
GSMUA_AchrUn_...	Banana	cytosol	28.84	54.22
GSMUA_Achr3P27790_001	Banana	cytosol	79.97	51.1
GSMUA_Achr3P28030_001	Banana	plasma membrane	84.8	45.46
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane	61.49	44.84
GSMUA_AchrUn_...	Banana	cytosol	18.31	40.93
GSMUA_AchrUn_...	Banana	cytosol	48.7	39.11
GSMUA_Achr3P27817_001	Banana	cytosol	14.51	29.07
GSMUA_Achr9P23050_001	Banana	cytosol	54.23	28.89
GSMUA_AchrUn_...	Banana	plasma membrane	69.6	27.99
GSMUA_AchrUn_...	Banana	cytosol	24.87	24.74
HORVU5Hr1G055260.1	Barley	mitochondrion, plasma membrane	23.14	24.06
GSMUA_Achr10P...	Banana	cytosol	14.34	23.65
GSMUA_Achr2P11320_001	Banana	cytosol	35.58	20.22
GSMUA_Achr1P14020_001	Banana	cytosol	35.92	20.17
GSMUA_Achr11P...	Banana	cytosol	35.58	19.92
GSMUA_Achr10P...	Banana	cytosol	36.79	19.81
GSMUA_Achr1P14030_001	Banana	cytosol	35.75	19.62
GSMUA_Achr10P...	Banana	cytosol	31.09	19.57
GSMUA_Achr10P...	Banana	cytosol	35.06	19.03
GSMUA_Achr10P...	Banana	cytosol	34.72	18.94
GSMUA_Achr2P03610_001	Banana	cytosol	33.51	18.82
GSMUA_Achr10P...	Banana	cytosol	33.85	18.56
GSMUA_Achr9P20610_001	Banana	cytosol	33.85	18.42
GSMUA_Achr1P12550_001	Banana	cytosol	33.33	18.19
GSMUA_Achr10P...	Banana	cytosol	24.52	17.86
TraesCS1B01G169700.1	Wheat	cytosol	28.67	17.81
TraesCS6B01G070200.1	Wheat	cytosol	27.98	17.74
EER97218	Sorghum	mitochondrion, plasma membrane	34.2	17.74
TraesCS5B01G178900.1	Wheat	cytosol	29.36	17.47
TraesCS5A01G181200.1	Wheat	mitochondrion	29.36	17.44
Zm00001d021491_P001	Maize	cytosol, plasma membrane	33.33	17.34
Zm00001d021492_P002	Maize	cytosol	31.95	17.11
Os07t0481300-01	Rice	cytosol	32.64	16.84
OQU89955	Sorghum	cytosol	31.26	16.79
Os07t0481400-01	Rice	cytosol	31.26	16.76
Os09t0313500-01	Rice	plasma membrane	31.43	16.62
HORVU0Hr1G039660.8	Barley	cytosol	30.05	16.57
TraesCS5D01G185700.1	Wheat	plastid	30.74	16.42
TraesCS5B01G179100.1	Wheat	plastid	30.74	16.42
TraesCS5A01G181400.1	Wheat	plastid	30.74	16.42
Os09t0313600-00	Rice	plasma membrane	29.53	16.39
TraesCS5D01G185600.1	Wheat	cytosol	29.53	16.32
TraesCS7B01G491900.1	Wheat	mitochondrion	5.53	15.92
Solyc07g053020.1.1	Tomato	cytosol	21.93	14.91
PGSC0003DMT400009065	Potato	cytosol	21.59	14.74
PGSC0003DMT400067354	Potato	cytosol	21.93	14.51
Solyc02g084890.1.1	Tomato	cytosol, extracellular, nucleus	21.07	14.35
VIT_04s0023g02380.t01	Wine grape	cytosol	20.73	14.12
Solyc07g053010.1.1	Tomato	cytosol	21.42	14.11
PGSC0003DMT400067280	Potato	cytosol, mitochondrion	21.42	14.04
PGSC0003DMT400079012	Potato	cytosol	3.8	14.01
Zm00001d035125_P001	Maize	cytosol, mitochondrion, plasma membrane	30.05	13.75
AT3G50950.1	Thale cress	cytosol	20.21	13.73
TraesCS1D01G149200.1	Wheat	cytosol	32.82	13.73
TraesCS1A01G152300.1	Wheat	cytosol	32.82	13.73
Zm00001d035129_P001	Maize	plasma membrane	23.32	12.78
HORVU1Hr1G040540.18	Barley	mitochondrion	32.82	12.57
GSMUA_Achr1P12540_001	Banana	cytosol	12.61	12.23
Zm00001d032724_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion, plastid	31.26	12.12
KXG38346	Sorghum	nucleus	30.57	11.61
Bra036845.1-P	Field mustard	plastid	20.55	9.22
CDX73766	Canola	plastid	20.38	9.14
TraesCS6B01G070000.1	Wheat	cytosol	3.63	4.69

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0043531	EnsemblPlantsGene:GSMUA_AchrUn_randomG27810_001	EnsemblPlants:GSMUA_AchrUn_randomP27810_001	EnsemblPlants:GSMUA_AchrUn_randomT27810_001	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M0UCY9	InterPro:NB-ARC	InterPro:P-loop_NTPase
PFAM:PF00931	PFAM:PF13855	PRINTS:PR00364	PANTHER:PTHR44518	SUPFAM:SSF52058	SUPFAM:SSF52540
UniParc:UPI000295127B	SEG:seg	:	:	:	:

Description

Putative Disease resistance protein RGA2 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG27810_001]

Coordinates

chrchrUn_random:-:135436254..135438402

Molecular Weight (calculated)

65575.6 Da

IEP (calculated)

6.608

GRAVY (calculated)

-0.120

Length

579 amino acids

Sequence
(BLAST)

001: EERDAQDLKD TGMKIVEKCG GLPLAIKTIG GVLRDRGLNR SAWEEVLRSA AWSRTGLPEG VHGALYLSYQ DLPSHLKQCF LYCALFREDF DFESPEIVRL
101: WIAEGLFISD HIVSLIKQHE SVRALLVHGY AKDIDDYLKN FVRLRVLHLM GRNIQSLPHY MGNLIHLRYL TVSQSHITEL PESICNLTNL QFLILFGCRR
201: LTQIPQGIVR LVNLRALDCK GTRLESFPYG IKRLKHLNEL QGFVVNTGIG MCPLEALCGL QELRYLSIHR LERAWLEAEP GRDTSVLKGK QKLKNLYLGC
301: SFTYDGHTEE EIERIEKVLD VALHPPSSVV MLSLENLFGR RYPSWMASAS IRKLPSLEFL VIRGARARPS SSPPPSLFPK LRQLELRKMT NMEVWDWVAE
401: GFAMRRLDKL DLVNCPTLKS LPEGLIRQAT CLTTLNLRDV CALKSIRGFP SVKELSISGE SDLEIVTDLP ALEVLELGEF LLPNNHLPEW LAACPACFTS
501: LQRLDVLGTT QLLRRCLQNG ADWPMIKHFP NFSIKDDRGN YINYIKHSGT FETNLVDDAA AFAAAAAEEE EEGEDINEL

Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)

0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS

Arabidopsis Description

Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.