Factsheet for GSMUA_Achr3P27830_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	26.84	83.01
GSMUA_AchrUn_...	Banana	cytosol	62.8	79.71
GSMUA_AchrUn_...	Banana	cytosol	56.8	78.58
GSMUA_AchrUn_...	Banana	cytosol	66.42	77.33
GSMUA_Achr3P27810_001	Banana	cytosol, endoplasmic reticulum	80.03	73.09
GSMUA_AchrUn_...	Banana	cytosol	30.84	72.86
GSMUA_Achr3P27790_001	Banana	cytosol	79.53	70.31
GSMUA_AchrUn_...	Banana	cytosol	26.34	68.51
GSMUA_Achr3P28030_001	Banana	plasma membrane	81.9	60.74
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane	56.68	57.18
GSMUA_Achr3P27817_001	Banana	cytosol	19.6	54.33
GSMUA_AchrUn_...	Banana	cytosol	43.82	48.68
GSMUA_Achr9P23050_001	Banana	cytosol	54.68	40.29
GSMUA_AchrUn_...	Banana	plasma membrane	70.54	39.24
GSMUA_AchrUn_...	Banana	cytosol	21.85	30.07
GSMUA_Achr2P11320_001	Banana	cytosol	37.7	29.64
GSMUA_Achr11P...	Banana	cytosol	35.83	27.76
GSMUA_Achr1P14030_001	Banana	cytosol	36.2	27.49
GSMUA_Achr1P14020_001	Banana	cytosol	34.96	27.16
GSMUA_Achr10P...	Banana	cytosol	30.84	26.85
GSMUA_Achr10P...	Banana	cytosol	35.71	26.6
GSMUA_Achr10P...	Banana	cytosol	11.61	26.5
TraesCS1B01G169700.1	Wheat	cytosol	30.59	26.29
TraesCS6B01G070200.1	Wheat	cytosol	29.84	26.18
PGSC0003DMT400079012	Potato	cytosol	5.12	26.11
GSMUA_Achr2P03610_001	Banana	cytosol	33.58	26.09
GSMUA_Achr10P...	Banana	cytosol	34.46	25.87
HORVU5Hr1G055260.1	Barley	mitochondrion, plasma membrane	17.98	25.85
GSMUA_Achr1P12550_001	Banana	cytosol	34.21	25.82
GSMUA_Achr10P...	Banana	cytosol	33.71	25.45
GSMUA_Achr9P20610_001	Banana	cytosol	33.58	25.28
GSMUA_Achr10P...	Banana	cytosol	32.96	25.0
GSMUA_Achr10P...	Banana	cytosol	24.47	24.65
TraesCS5A01G181200.1	Wheat	mitochondrion	29.84	24.51
EER97218	Sorghum	mitochondrion, plasma membrane	33.58	24.1
TraesCS5B01G178900.1	Wheat	cytosol	29.21	24.05
Zm00001d021491_P001	Maize	cytosol, plasma membrane	33.33	23.99
Os07t0481400-01	Rice	cytosol	31.71	23.52
Zm00001d021492_P002	Maize	cytosol	31.71	23.5
OQU89955	Sorghum	cytosol	31.46	23.38
Os09t0313600-00	Rice	plasma membrane	29.96	23.01
Os07t0481300-01	Rice	cytosol	31.84	22.73
HORVU0Hr1G039660.8	Barley	cytosol	29.59	22.57
TraesCS5D01G185600.1	Wheat	cytosol	29.34	22.42
Os09t0313500-01	Rice	plasma membrane	30.34	22.19
GSMUA_Achr1P12540_001	Banana	cytosol	16.35	21.94
TraesCS5A01G181400.1	Wheat	plastid	28.84	21.31
TraesCS5D01G185700.1	Wheat	plastid	28.71	21.22
TraesCS5B01G179100.1	Wheat	plastid	28.59	21.13
Solyc07g053020.1.1	Tomato	cytosol	22.35	21.01
PGSC0003DMT400009065	Potato	cytosol	22.1	20.87
VIT_04s0023g02380.t01	Wine grape	cytosol	21.72	20.47
Solyc02g084890.1.1	Tomato	cytosol, extracellular, nucleus	21.6	20.35
PGSC0003DMT400067354	Potato	cytosol	22.1	20.23
TraesCS7B01G491900.1	Wheat	mitochondrion	4.99	19.9
Solyc07g053010.1.1	Tomato	cytosol	21.72	19.8
AT3G50950.1	Thale cress	cytosol	20.97	19.72
PGSC0003DMT400067280	Potato	cytosol, mitochondrion	21.72	19.71
TraesCS1D01G149200.1	Wheat	cytosol	33.83	19.58
TraesCS1A01G152300.1	Wheat	cytosol	33.71	19.51
Zm00001d035125_P001	Maize	cytosol, mitochondrion, plasma membrane	29.59	18.74
Zm00001d035129_P001	Maize	plasma membrane	24.47	18.56
HORVU1Hr1G040540.18	Barley	mitochondrion	33.71	17.87
Zm00001d032724_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion, plastid	31.71	17.01
KXG38346	Sorghum	nucleus	31.71	16.67
CDX73766	Canola	plastid	20.85	12.94
Bra036845.1-P	Field mustard	plastid	20.85	12.94
TraesCS6B01G070000.1	Wheat	cytosol	2.12	3.79

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	EnsemblPlantsGene:GSMUA_Achr3G27830_001	EnsemblPlants:GSMUA_Achr3P27830_001	EnsemblPlants:GSMUA_Achr3T27830_001	InterPro:IPR032675
InterPro:LRR_dom_sf	UniProt:M0SIE9	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364
PANTHER:PTHR44518	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI000294F99B	SEG:seg

Description

Putative disease resistance protein RGA1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G27830_001]

Coordinates

chr3:+:27308495..27310900

Molecular Weight (calculated)

90122.0 Da

IEP (calculated)

7.043

GRAVY (calculated)

-0.147

Length

801 amino acids

Sequence
(BLAST)

001: LEPTVDGLLR GNKFLLVLDD VWDAQIWDDL LRNPLHGGAA GSRVLVTTRN VGIATQMKAA LVHRMKQLPP EDGWSLLCKK ATMNAEEERD AQDLKDTGMK
101: IVEKCGGLPL AIKTIGGVLR DRGLNRSAWE EVLRSAAWSR TGLPDGVHAA LYLSYQDLPS HLKQCFLYCA LLREDRVFHM LPIVRLWIAE GFVEARGDVS
201: LEETGEQYYR ELHHRSLLQA QFSHSDDDHS KMHDLLRSLG HLLSRDESLF ISDVQNEWRS GAAPMKLRRL SIVATETMDI QHLVSLTKRH ESVRTLLVEG
301: TRSNVDDIDD CLKNLVRLRV LHLTSNLMHT KIDILPHYIG NLIHLRYLNV SWTGITELPE SICNLTNLQF LILTGCRQLT QIPRGIDGLV NLRTLDCQST
401: RLESLPYGIG RLKYLNELRG FVVNTATGTC PLEALGGLRE LRYLSISLER TWLEAQSGRD TSGLKGNKKL KHLYFRCSST PTSDGHTKKQ IERIEKVLDV
501: ALHPPSFVVS LTLDNFFGLR YPSWMASASI SSLLPNIRRL KLIDCNHWPL LPPLGKLPSL EFLEIVGADA VTTIGPEFFG CEVAATGHDR ERNSKLPSSS
601: SSSSPSPPLF PSLRQLQLWN MTNLEVWDWV AEGFAMRRLD KFVLHNCPKL KSLPEGLIRQ ATCLTTLYLT DVCALKSIRG FPSLKELSII GKSDLEIVTD
701: LPALELLKLV TFGSCLPRWL AAGPACFTSL QKLDVRGTTQ LLRRCLQNGA DWPMIKHFPI FSIDDQQGNY INYIKHSYTI ETNLVEDAAA AEEEEDIINE
801: L

Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)

0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS

Arabidopsis Description

Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.