Factsheet for GSMUA_Achr9P20610_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	50.09	51.55
GSMUA_Achr2P03610_001	Banana	cytosol	49.81	51.41
GSMUA_Achr10P...	Banana	cytosol	43.7	50.54
GSMUA_Achr10P...	Banana	cytosol	50.28	50.42
GSMUA_Achr1P12540_001	Banana	cytosol	28.29	50.42
GSMUA_Achr10P...	Banana	cytosol	50.09	49.95
GSMUA_Achr10P...	Banana	cytosol	37.31	49.94
GSMUA_Achr10P...	Banana	cytosol	50.38	49.86
GSMUA_Achr10P...	Banana	cytosol	49.25	49.62
GSMUA_Achr1P12550_001	Banana	cytosol	48.21	48.35
GSMUA_AchrUn_...	Banana	cytosol	26.32	48.11
GSMUA_Achr10P...	Banana	cytosol	15.04	45.58
GSMUA_Achr2P11320_001	Banana	cytosol	38.44	40.14
Zm00001d014876_P005	Maize	cytosol	39.76	39.42
TraesCS7A01G557700.2	Wheat	cytosol	40.13	39.14
TraesCS7B01G482300.1	Wheat	cytosol, plastid	40.23	39.12
KXG20980	Sorghum	cytosol	39.0	38.71
TraesCS7D01G552700.1	Wheat	cytosol	39.66	38.64
GSMUA_Achr1P14030_001	Banana	cytosol	38.06	38.39
GSMUA_Achr1P14020_001	Banana	cytosol	37.03	38.22
HORVU7Hr1G120540.3	Barley	cytosol	39.66	38.16
Os02t0456800-01	Rice	cytosol	38.72	37.83
GSMUA_AchrUn_...	Banana	cytosol	8.83	36.29
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane	26.13	35.01
GSMUA_AchrUn_...	Banana	cytosol	22.09	34.16
GSMUA_Achr3P27810_001	Banana	cytosol, endoplasmic reticulum	28.01	33.98
GSMUA_AchrUn_...	Banana	cytosol	18.42	33.85
GSMUA_Achr3P27790_001	Banana	cytosol	28.76	33.77
GSMUA_Achr3P27830_001	Banana	cytosol, peroxisome	25.28	33.58
GSMUA_Achr3P27817_001	Banana	cytosol	9.12	33.56
GSMUA_AchrUn_...	Banana	cytosol	19.64	33.12
GSMUA_Achr3P28030_001	Banana	plasma membrane	33.46	32.96
GSMUA_Achr9P23050_001	Banana	cytosol	32.89	32.2
GSMUA_AchrUn_...	Banana	cytosol	21.15	31.21
GSMUA_AchrUn_...	Banana	cytosol	8.27	28.57
PGSC0003DMT400067354	Potato	cytosol	21.62	26.29
Solyc07g053020.1.1	Tomato	cytosol	20.96	26.17
PGSC0003DMT400079012	Potato	cytosol	3.85	26.11
PGSC0003DMT400009065	Potato	cytosol	20.77	26.06
GSMUA_AchrUn_...	Banana	cytosol	8.27	25.96
Solyc02g084890.1.1	Tomato	cytosol, extracellular, nucleus	20.49	25.65
Solyc07g053010.1.1	Tomato	cytosol	21.05	25.48
VIT_04s0023g02380.t01	Wine grape	cytosol	20.3	25.41
PGSC0003DMT400067280	Potato	cytosol, mitochondrion	21.05	25.37
AT3G50950.1	Thale cress	cytosol	20.02	25.0
GSMUA_AchrUn_...	Banana	plasma membrane	31.2	23.06
CDX73766	Canola	plastid	20.3	16.73
Bra036845.1-P	Field mustard	plastid	20.3	16.73

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0043531	EnsemblPlantsGene:GSMUA_Achr9G20610_001	EnsemblPlants:GSMUA_Achr9P20610_001	EnsemblPlants:GSMUA_Achr9T20610_001
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M0U220
InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PFAM:PF13855	PRINTS:PR00364	PANTHER:PTHR44518
InterPro:RX-like_CC	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI000295AB1B	SEG:seg

Description

Putative NB-ARC domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G20610_001]

Coordinates

chr9:+:24698080..24701274

Molecular Weight (calculated)

122103.0 Da

IEP (calculated)

7.202

GRAVY (calculated)

-0.267

Length

1064 amino acids

Sequence
(BLAST)

0001: MAMFLEFFVP RYLGKLAEFV EGEACKVLGA KKEINKFQSR LATIQLYLKD AEKKRHEDAT VKSWVMRMKD VMYDADDVID LCMFEGGKLL EARTSASSLG
0101: VCLPFHLLSS CFTCIRYRHQ VSSRIKELND RFRQIAEDSS IVATLVKSDQ GSSSQSQDNM LRSRETHSLE VKSDIVGTQI EDATQNIINK IMQNDKSKCQ
0201: IFGIVGMGGI GKTTLARKIF NDERIKNKFP KRIWLYVSKN YAEIDLLNKI IRSAGGNVIG GESTEQLVEQ LVSLVSQDFF VVLDDVWGTD VWEKLLRDPM
0301: MSGVASSRIV VTSRYEDVVK RIGSRHIHHV DRMDTESGWA LLCKIVFREE EDPEIGRLKE IGKKIVEKCD GLPLAIKAVG GVLRSKETSQ AEWKKVVESD
0401: WWHMKQMEEE VPRALYLSYE DLPYHLKPCF LYCALYPSDN SRLLALLWVA EGFIAEQGER LIEDIALDCY RELIQRNLLQ PDPYSVDQDI FVMHDLLRSL
0501: GKSLVEGESI CMIDDKTSKM NSSMMKIRRL SMSTTREILT LPGEVMKQSD RLRTLILFDS HQTKTVEDDV LKRLRHLRVL DLAYTSIETI PDTIGKLIHL
0601: RYLCLAYTKI HEIPKTVGRL ANLQMLMVEG CQQLHVLPKA IIRLHNLRCL ALTGSPLTHI PKGIGRLKNL NSIMGFVVGY DESRSKPDEE WCDLEELKSL
0701: SKMRHLSIYR LQRATINGVS VLTSMSMLRE LTLGWTMSVD PCSSEDQIQR AEKIFDQLSP PSSLQKLWIK GFPGRRFPSW MMSKTTPTGD SLPNLKFLSI
0801: WDLPSWVELP PVSRFPQLKW FDVNRAKAIK TIGPEFLGLG DAGGEPTCRK LEHTKFEDMP NWEEWVEKKV DGDDGGRALR LRPLSNLKSC RLQNCPKLRA
0901: LPDVLRHAPN LERLVIWNNH FMREIDDLPF LADKLIVVQM EMLQRISNLP SVKELNIVLC PRLEFVENLN MLQHLRLECP PEAEQLPMWL ADLIEQHRTA
1001: PSARRSFKIF ELDCGLPLLS SCLKGEPNWH IIQQIPEVRI QTYDERNFLY AKDHDIYETN VGSE

Best Arabidopsis Sequence Match ( AT3G50950.1 )
(BLAST)

001: MVDAVVTVFL EKTLNILEEK GRTVSDYRKQ LEDLQSELKY MQSFLKDAER QKRTNETLRT LVADLRELVY EAEDILVDCQ LADGDDGNEQ RSSNAWLSRL
101: HPARVPLQYK KSKRLQEINE RITKIKSQVE PYFEFITPSN VGRDNGTDRW SSPVYDHTQV VGLEGDKRKI KEWLFRSNDS QLLIMAFVGM GGLGKTTIAQ
201: EVFNDKEIEH RFERRIWVSV SQTFTEEQIM RSILRNLGDA SVGDDIGTLL RKIQQYLLGK RYLIVMDDVW DKNLSWWDKI YQGLPRGQGG SVIVTTRSES
301: VAKRVQARDD KTHRPELLSP DNSWLLFCNV AFAANDGTCE RPELEDVGKE IVTKCKGLPL TIKAVGGLLL CKDHVYHEWR RIAEHFQDEL RGNTSETDNV
401: MSSLQLSYDE LPSHLKSCIL TLSLYPEDCV IPKQQLVHGW IGEGFVMWRN GRSATESGED CFSGLTNRCL IEVVDKTYSG TIITCKIHDM VRDLVIDIAK
501: KDSFSNPEGL NCRHLGISGN FDEKQIKVNH KLRGVVSTTK TGEVNKLNSD LAKKFTDCKY LRVLDISKSI FDAPLSEILD EIASLQHLAC LSLSNTHPLI
601: QFPRSMEDLH NLQILDASYC QNLKQLQPCI VLFKKLLVLD MTNCGSLECF PKGIGSLVKL EVLLGFKPAR SNNGCKLSEV KNLTNLRKLG LSLTRGDQIE
701: EEELDSLINL SKLMSISINC YDSYGDDLIT KIDALTPPHQ LHELSLQFYP GKSSPSWLSP HKLPMLRYMS ICSGNLVKMQ EPFWGNENTH WRIEGLMLSS
801: LSDLDMDWEV LQQSMPYLRT VTANWCPELE SFAIEDVGFR GGVWMKTPLH RT

Arabidopsis Description

RPP13L4Disease resistance RPP13-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q38834]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.