Factsheet for TraesCS3A01G069200.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 3
golgi 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
iPSORT:	plastid
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G012610.1	Barley	plastid	43.95	86.32
TraesCS3A01G068600.1	Wheat	cytosol	64.68	82.8
TraesCS3A01G068300.1	Wheat	cytosol, extracellular	61.69	80.0
TraesCS3A01G068900.1	Wheat	cytosol	45.11	77.49
TraesCS3A01G068500.2	Wheat	cytosol, extracellular	72.31	76.09
Os11t0676800-00	Rice	cytosol	56.05	52.81
HORVU3Hr1G012510.23	Barley	cytosol	82.59	48.82
TraesCS3A01G069800.2	Wheat	cytosol	73.8	47.64
TraesCS3A01G069300.1	Wheat	cytosol	78.61	46.98
TraesCS3A01G068700.1	Wheat	cytosol	76.12	45.31
TraesCS3A01G068800.1	Wheat	cytosol, extracellular	75.79	44.94
TraesCS3A01G068200.1	Wheat	cytosol	73.96	43.81
TraesCS5A01G533700.1	Wheat	cytosol	38.97	36.43
KXG29105	Sorghum	cytosol	55.39	32.78
TraesCS7A01G374100.1	Wheat	cytosol	53.23	32.16
TraesCS5A01G292200.1	Wheat	cytosol	51.24	30.26
TraesCS6A01G020600.1	Wheat	cytosol	26.04	29.79
TraesCS4A01G309500.4	Wheat	cytosol	19.07	28.61
TraesCS7A01G043200.1	Wheat	cytosol	18.08	28.17
Os11t0673900-00	Rice	cytosol, plasma membrane	38.47	27.85
TraesCS6A01G051800.1	Wheat	cytosol	9.29	26.17
TraesCS7A01G478400.1	Wheat	cytosol	12.27	25.78
TraesCS7A01G566900.1	Wheat	cytosol	8.29	24.63
PGSC0003DMT400079012	Potato	cytosol	5.97	22.93
GSMUA_Achr2P11320_001	Banana	cytosol	36.32	21.49
TraesCS7A01G566700.1	Wheat	cytosol	22.89	20.63
TraesCS3A01G073800.1	Wheat	cytosol	33.33	20.32
TraesCS3A01G073700.1	Wheat	cytosol	32.84	20.06
TraesCS4A01G310200.1	Wheat	cytosol	28.19	19.98
GSMUA_Achr1P14020_001	Banana	cytosol	34.0	19.88
GSMUA_Achr1P14030_001	Banana	cytosol	34.33	19.62
TraesCS7A01G567300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	5.97	19.35
TraesCS7A01G568700.2	Wheat	mitochondrion	21.06	17.69
TraesCS7A01G557700.2	Wheat	cytosol	30.85	17.05
PGSC0003DMT400009065	Potato	cytosol	23.71	16.86
VIT_04s0023g02380.t01	Wine grape	cytosol	23.71	16.82
Solyc02g084890.1.1	Tomato	cytosol, extracellular, nucleus	23.71	16.82
TraesCS6A01G415000.1	Wheat	cytosol	29.52	16.65
TraesCS7A01G567400.1	Wheat	cytosol	29.19	16.48
Solyc07g053020.1.1	Tomato	cytosol	23.05	16.31
Solyc07g053010.1.1	Tomato	cytosol	23.71	16.27
TraesCS7A01G567200.2	Wheat	cytosol	28.52	16.26
PGSC0003DMT400067354	Potato	cytosol	23.55	16.23
TraesCS7A01G333500.1	Wheat	cytosol, plastid	28.69	16.21
AT3G50950.1	Thale cress	cytosol	22.89	16.2
PGSC0003DMT400067280	Potato	cytosol, mitochondrion	23.38	15.97
TraesCS5A01G036900.1	Wheat	cytosol	27.36	15.36
TraesCS1A01G242300.1	Wheat	cytosol	26.37	15.23
TraesCS2A01G495600.1	Wheat	mitochondrion	28.19	14.82
TraesCS6A01G052400.1	Wheat	cytosol	28.19	14.12
TraesCS5A01G181200.1	Wheat	mitochondrion	22.72	14.05
TraesCS3A01G044600.1	Wheat	cytosol	19.9	13.67
TraesCS1A01G376600.1	Wheat	cytosol	26.53	13.04
TraesCS5A01G181400.1	Wheat	plastid	22.72	12.64
TraesCS6A01G052500.1	Wheat	cytosol	28.36	11.97
TraesCS6A01G052200.1	Wheat	cytosol	28.19	11.85
TraesCS6A01G051900.4	Wheat	cytosol	27.86	11.67
TraesCS7A01G568100.1	Wheat	cytosol, plasma membrane	27.36	11.52
CDX73766	Canola	plastid	23.05	10.77
Bra036845.1-P	Field mustard	plastid	22.89	10.69
TraesCS7A01G478300.1	Wheat	cytosol	9.45	9.12
TraesCS1A01G152300.1	Wheat	cytosol	19.24	8.38
TraesCS7A01G567500.2	Wheat	mitochondrion, plastid	23.38	8.03
TraesCS7A01G566500.1	Wheat	cytosol	6.47	6.75
TraesCS4A01G309600.1	Wheat	cytosol	7.46	6.57
TraesCS7A01G566800.1	Wheat	cytosol	8.96	5.67
TraesCS7A01G566600.1	Wheat	extracellular, plasma membrane	0.66	1.56
TraesCS6A01G052300.1	Wheat	extracellular, golgi	0.5	0.45

Protein Annotations

EnsemblPlants:TraesCS3A01G069200.1	EnsemblPlantsGene:TraesCS3A01G069200	Gene3D:1.10.8.430	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	InterPro:RX-like_CC	PANTHER:PTHR44518
PFAM:PF00931	PRINTS:PR00364	SEG:seg	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1

Description

No Description!

Coordinates

chr3A:+:41368832..41372790

Molecular Weight (calculated)

69042.8 Da

IEP (calculated)

8.047

GRAVY (calculated)

-0.149

Length

603 amino acids

Sequence
(BLAST)

001: MAAILASLLG SCANKLQNII TDEAILILGV EEDLREVLQR VELIQCCIYD AEKRRTKELA VNNWLGQLRD VIYDVDEILD VARCKGSKLL PDDPSSSSTT
101: SAACKGLSVS SCFCNIWSRR DVAVRIRSLN KKIENISKDT VFFTLDTNIQ PTRNVATSKL IRSSNLVEPN LVGKEIKYAS RKLVDLVVAH KKSKSYKLAI
201: VGKGGVGKTT LAQKIYNDQT IKGSFKIHAW ICVSQDYNEV TLLKEVLRNI GVHHEQGETI TELQRKLAET IEGKSFFLVL DDVWHSNVWM DLLRPALHET
301: TSGVILVTTR DDQITRRIGV QHIHRVDLMS VEVGWELLWK SMNIDEEKEV QNLRNTGIEI VRKCGRLPLA IKVTASALAS RDLTENEWRK YLDKYVGSHN
401: MISDEIQGSL YLSYDELPHR LKQCFLYCAL YAEDSIIWRN KVTWLWIAEG FIEERQGQLI EDVAEEYYYE LIHRNLLQAD ILYFGMVASK MHDLLRQLAL
501: NISREECFIG DVETLRGVNM SKLRRVTAVT KKDMLVLSRV DKVDVKVRTF HGGSSKLRKL VNVEDAQVPC LWMCNEPVKK EIVLFSFGQV PRKYCIEFRF
601: VYF

Best Arabidopsis Sequence Match ( AT1G58848.2 )
(BLAST)

0001: MAGELISFGI QNLWNLLSQE CELFQGVEDQ VTELKRDLNL LSSFLKDADA KKHTSAVVKN CVEEIKEIIY DGEDTIETFV LEQNLGKTSG IKKSIRRLAC
0101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRPRFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
0201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
0301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
0401: FNDDNNNTCN YVLSLSFEEL PSYLKHCFLY LAHFPDDYEI NVKNLSYYWA AEGIFQPRHY DGEIIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
0501: MMREVCLLKA KEENFLQITS SRTSTGNSLS IVTSRRLVYQ YPITLDVEKD INDPKLRSLV VVANTYMFWG GWSWMLLGSS FIRLELLRVL DIHRAKLKGG
0601: KLASSIGQLI HLRYLNLKHA EVTHIPYSLG NLKLLIYLNL VILVSGSTLV PNVLKEMQQL RYLALPKDMG RKTKLELSNL VKLETLKNFS TKNCSLEDLR
0701: GMVRLRTLTI ELRKETSLET LAASIGGLKY LESLTITDLG SEMRTKEAGI VFDFVYLKTL TLKLYMPRLS KEQHFPSHLT TLYLQHCRLE EDPMPILEKL
0801: HQLKELELRR KSFSGKEMVC SSGGFPQLQK LSIKGLEEWE DWKVEESSMP VLHTLDIRDC RKLKQLPDEH LPSHLTSISL FFCCLEEDPM PTLERLVHLK
0901: ELQLLFRSFS GRIMVCAGSG FPQLHKLKLS ELDGLEEWIV EDGSMPQLHT LEIRRCPKLK KLPNGFPQLQ NLELNELEEW EEWIVEDGSM PLLHTLRIWN
1001: CPKLKQLPDG LRFIYSLKNL TVPKRWKKRL SKGGEDYYKV QHIPSVEFY

Arabidopsis Description

RF9Probable disease resistance protein RDL6 [Source:UniProtKB/Swiss-Prot;Acc:P0DI18]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.