Factsheet for TraesCS4A01G309600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G004200.1	Wheat	cytosol	83.5	53.76
TraesCS4B01G004800.1	Wheat	cytosol	74.6	51.36
TraesCS7A01G566500.1	Wheat	cytosol	41.46	49.13
TraesCS7A01G566600.1	Wheat	extracellular, plasma membrane	17.81	47.47
HORVU4Hr1G000310.6	Barley	cytosol	65.84	46.74
TraesCS7A01G478300.1	Wheat	cytosol	41.17	45.12
TraesCS3A01G044600.1	Wheat	cytosol	55.47	43.28
HORVU4Hr1G000350.2	Barley	cytosol, mitochondrion	76.5	42.95
TraesCS5A01G036900.1	Wheat	cytosol	56.2	35.85
TraesCS7A01G566800.1	Wheat	cytosol	47.15	33.93
TraesCS1A01G376600.1	Wheat	cytosol	59.42	33.17
TraesCS2A01G495600.1	Wheat	mitochondrion	54.45	32.52
TraesCS7A01G568700.2	Wheat	mitochondrion	33.58	32.03
TraesCS6A01G415000.1	Wheat	cytosol	48.32	30.96
TraesCS7A01G333500.1	Wheat	cytosol, plastid	47.59	30.55
TraesCS7A01G567200.2	Wheat	cytosol	45.55	29.49
TraesCS7A01G567400.1	Wheat	cytosol	44.53	28.56
Os11t0704100-00	Rice	cytosol	47.3	28.55
TraesCS6A01G052400.1	Wheat	cytosol	47.15	26.83
TraesCS4A01G310200.1	Wheat	cytosol	32.85	26.44
TraesCS7A01G566700.1	Wheat	cytosol	25.26	25.86
TraesCS1A01G242300.1	Wheat	cytosol	36.79	24.14
TraesCS6A01G052200.1	Wheat	cytosol	50.51	24.11
TraesCS6A01G052500.1	Wheat	cytosol	49.93	23.95
TraesCS6A01G051900.4	Wheat	cytosol	48.03	22.85
TraesCS7A01G568100.1	Wheat	cytosol, plasma membrane	46.28	22.14
Os05t0250700-00	Rice	cytosol	22.19	21.87
TraesCS6A01G052300.1	Wheat	extracellular, golgi	19.71	20.09
TraesCS5A01G533700.1	Wheat	cytosol	17.81	18.91
TraesCS7A01G567500.2	Wheat	mitochondrion, plastid	47.74	18.62
TraesCS7A01G557700.2	Wheat	cytosol	28.76	18.06
TraesCS3A01G068200.1	Wheat	cytosol	26.28	17.68
TraesCS3A01G069300.1	Wheat	cytosol	25.99	17.64
TraesCS7A01G374100.1	Wheat	cytosol	25.69	17.64
TraesCS5A01G292200.1	Wheat	cytosol	26.13	17.53
TraesCS3A01G068800.1	Wheat	cytosol, extracellular	25.84	17.4
TraesCS3A01G068700.1	Wheat	cytosol	25.69	17.37
TraesCS3A01G069800.2	Wheat	cytosol	23.36	17.13
TraesCS3A01G073700.1	Wheat	cytosol	23.65	16.41
TraesCS3A01G073800.1	Wheat	cytosol	23.65	16.38
TraesCS5A01G181200.1	Wheat	mitochondrion	23.07	16.21
TraesCS5A01G181400.1	Wheat	plastid	22.63	14.3
TraesCS6A01G020600.1	Wheat	cytosol	10.8	14.04
TraesCS1A01G152300.1	Wheat	cytosol	26.42	13.08
TraesCS3A01G068500.2	Wheat	cytosol, extracellular	7.3	8.73
TraesCS3A01G069200.1	Wheat	extracellular	6.57	7.46
Os05t0250600-00	Rice	endoplasmic reticulum, extracellular, mitochondrion	2.04	7.29
TraesCS3A01G068600.1	Wheat	cytosol	4.09	5.94
TraesCS3A01G068300.1	Wheat	cytosol, extracellular	3.36	4.95
TraesCS7A01G567300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	1.17	4.3
TraesCS6A01G051800.1	Wheat	cytosol	0.44	1.4
TraesCS3A01G068900.1	Wheat	cytosol	0.44	0.85
TraesCS7A01G043200.1	Wheat	cytosol	0.15	0.26
TraesCS4A01G309500.4	Wheat	cytosol	0.0	0.0
TraesCS7A01G478400.1	Wheat	cytosol	0.0	0.0
TraesCS7A01G566900.1	Wheat	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS4A01G309600.1	EnsemblPlantsGene:TraesCS4A01G309600	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	PANTHER:PTHR23155	PANTHER:PTHR23155:SF872
PFAM:PF00931	SEG:seg	SUPFAM:SSF52058	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr4A:+:602873144..602875409

Molecular Weight (calculated)

78041.7 Da

IEP (calculated)

5.857

GRAVY (calculated)

-0.176

Length

685 amino acids

Sequence
(BLAST)

001: MSDELNYAIY LSYKDLPSCL KQCFLHFSLK PKKSELSLGE IVSMWICEGL LQGGSTSLEE EGKRNYKELI LRNLIEIDPS FPSQLICNMH DVIRSFAQFM
101: ARDETLVVHN GDTAKENLKS SNFLRLSVET KGVGSDEFEW IYLREQKLLR SLILTGNLKS QPGDSLTYFP SLRLLHIESA NIAALVESMY QLKHLRYLAL
201: KRTDVCRLPE NIHEMKFLQH INLEGCESFM KIPDSIIKLQ GLRYLDMDDT RVSSIPRGFR ALTNLTSLFG FPAYIDGDWC SLEELGSLSQ LNELSIRSLE
301: NVSSALLSAK ARLNAKKQLI SLGLKCDGRV GDGLVQGEVS ESKEEEQIIE AVFNVLCPHP CIEQINIERY FGRRLPGWMA CTAMVPLESL KILALEHLPC
401: CTQLPDGLCR LPYLEWIKVD GAPVIKCIGP EFVQQYNQLH RPSSQLAATF PRLQKLELHG MEEWEEWVWE TEVKAMPLLE ELCISGCKLG RMPPGLMSHA
501: MALKKLEIWN VQGLHSLENF VSVVELDLYD IPELGKISNL PKLQKLQIKY CPKLETLKDM DALRRLELRV SPWEYQLPVY LQTVKPSHLL LTCNLAVLTF
601: MAEGESSSEW GKFNHIKQVE AYAEDGQDEK KWHVLYTSES CNIQTNIHQA WRSGEVLPTC AKRSWVRTSL SALHFAGGRL VEEED

Best Arabidopsis Sequence Match ( AT3G14470.1 )
(BLAST)

0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD

Arabidopsis Description

RPPL1Putative disease resistance RPP13-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.