Factsheet for TraesCS4A01G309500.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G051800.1	Wheat	cytosol	32.59	61.22
TraesCS7A01G566900.1	Wheat	cytosol	29.1	57.64
TraesCS7A01G043200.1	Wheat	cytosol	53.98	56.07
TraesCS7A01G478400.1	Wheat	cytosol	39.55	55.4
TraesCS6A01G020600.1	Wheat	cytosol	68.41	52.18
TraesCS7A01G567300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	22.64	48.92
Os05t0250600-00	Rice	endoplasmic reticulum, extracellular, mitochondrion	17.41	36.46
TraesCS4D01G004200.1	Wheat	cytosol	91.79	34.68
TraesCS4B01G004800.1	Wheat	cytosol	85.57	34.57
HORVU4Hr1G000310.6	Barley	cytosol	80.35	33.47
Os05t0250700-00	Rice	cytosol	56.47	32.66
TraesCS4A01G310200.1	Wheat	cytosol	60.2	28.44
HORVU4Hr1G000350.2	Barley	cytosol, mitochondrion	81.34	26.8
TraesCS5A01G036900.1	Wheat	cytosol	70.65	26.44
TraesCS3A01G068900.1	Wheat	cytosol	22.39	25.64
TraesCS3A01G068300.1	Wheat	cytosol, extracellular	29.35	25.38
TraesCS1A01G376600.1	Wheat	cytosol	75.62	24.78
TraesCS3A01G068600.1	Wheat	cytosol	28.61	24.42
TraesCS2A01G495600.1	Wheat	mitochondrion	69.15	24.24
TraesCS7A01G566700.1	Wheat	cytosol	37.06	22.27
TraesCS6A01G415000.1	Wheat	cytosol	57.46	21.61
TraesCS3A01G068500.2	Wheat	cytosol, extracellular	29.35	20.59
TraesCS7A01G567200.2	Wheat	cytosol	53.98	20.51
TraesCS7A01G333500.1	Wheat	cytosol, plastid	54.23	20.43
Os11t0704100-00	Rice	cytosol	57.46	20.35
TraesCS7A01G567400.1	Wheat	cytosol	52.24	19.66
TraesCS6A01G052400.1	Wheat	cytosol	58.21	19.44
TraesCS3A01G069200.1	Wheat	extracellular	28.61	19.07
TraesCS1A01G242300.1	Wheat	cytosol	49.01	18.87
TraesCS3A01G044600.1	Wheat	cytosol	36.82	16.86
TraesCS6A01G051900.4	Wheat	cytosol	59.95	16.74
TraesCS6A01G052500.1	Wheat	cytosol	58.71	16.53
TraesCS6A01G052200.1	Wheat	cytosol	57.71	16.17
TraesCS7A01G568700.2	Wheat	mitochondrion	27.11	15.18
TraesCS7A01G568100.1	Wheat	cytosol, plasma membrane	52.24	14.66
TraesCS7A01G374100.1	Wheat	cytosol	32.84	13.23
TraesCS5A01G292200.1	Wheat	cytosol	31.59	12.44
TraesCS3A01G069800.2	Wheat	cytosol	28.86	12.42
TraesCS5A01G533700.1	Wheat	cytosol	19.65	12.25
TraesCS3A01G073700.1	Wheat	cytosol	29.85	12.16
TraesCS3A01G073800.1	Wheat	cytosol	28.86	11.73
TraesCS3A01G068700.1	Wheat	cytosol	28.86	11.45
TraesCS3A01G069300.1	Wheat	cytosol	27.86	11.1
TraesCS3A01G068800.1	Wheat	cytosol, extracellular	27.86	11.01
TraesCS7A01G557700.2	Wheat	cytosol	29.85	11.0
TraesCS3A01G068200.1	Wheat	cytosol	26.87	10.61
TraesCS5A01G181400.1	Wheat	plastid	25.87	9.59
TraesCS5A01G181200.1	Wheat	mitochondrion	20.15	8.31
TraesCS7A01G567500.2	Wheat	mitochondrion, plastid	34.58	7.92
TraesCS1A01G152300.1	Wheat	cytosol	15.17	4.41
TraesCS7A01G478300.1	Wheat	cytosol	2.49	1.6
TraesCS7A01G566500.1	Wheat	cytosol	0.0	0.0
TraesCS7A01G566800.1	Wheat	cytosol	0.0	0.0
TraesCS7A01G566600.1	Wheat	extracellular, plasma membrane	0.0	0.0
TraesCS4A01G309600.1	Wheat	cytosol	0.0	0.0
TraesCS6A01G052300.1	Wheat	extracellular, golgi	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS4A01G309500.4	EnsemblPlantsGene:TraesCS4A01G309500	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	InterPro:RX-like_CC	PANTHER:PTHR44851	PANTHER:PTHR44851:SF2
PFAM:PF00931	PRINTS:PR00364	SEG:seg	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1

Description

No Description!

Coordinates

chr4A:+:602870810..602873131

Molecular Weight (calculated)

44357.7 Da

IEP (calculated)

5.380

GRAVY (calculated)

-0.202

Length

402 amino acids

Sequence
(BLAST)

001: MAGVLDALAS YVTNMLTEMA KEEVSMLIGV SDGIRDLSIK LGDLKNFLAD ADRRNITDES VRGWVGELKR AMYLATDIVD LCQLKAMEQR PSKDMGCLNP
101: LLFCMRNPLH SHDIGTRIKA LNKELDSICE RGNKFKFAKL EVYQDMKMTR SLATDRKTDS LLERSGIVGE KIEEDTRALV EVLTSEEGSD KTGRHMVVAI
201: VGVGGIGKTT LGKKVFNDEA IKGKFTKKIW LSITQDFTDV ELLSTAITAA GGDQPGGGGT RDRALLVDSL KNAIEDKKFF LVLDDMWGAD AWNKLLMTPF
301: GYGGLGSRVL ITTRSETVAR NMKAAHCHHV DKLGREDAWS LLKNQVLTTE ENGHEVDVLK EIGLQIVENC DGLPLAIKVM GGLLCSKEKS QFAWEDVLND
401: DI

Best Arabidopsis Sequence Match ( AT3G50950.1 )
(BLAST)

001: MVDAVVTVFL EKTLNILEEK GRTVSDYRKQ LEDLQSELKY MQSFLKDAER QKRTNETLRT LVADLRELVY EAEDILVDCQ LADGDDGNEQ RSSNAWLSRL
101: HPARVPLQYK KSKRLQEINE RITKIKSQVE PYFEFITPSN VGRDNGTDRW SSPVYDHTQV VGLEGDKRKI KEWLFRSNDS QLLIMAFVGM GGLGKTTIAQ
201: EVFNDKEIEH RFERRIWVSV SQTFTEEQIM RSILRNLGDA SVGDDIGTLL RKIQQYLLGK RYLIVMDDVW DKNLSWWDKI YQGLPRGQGG SVIVTTRSES
301: VAKRVQARDD KTHRPELLSP DNSWLLFCNV AFAANDGTCE RPELEDVGKE IVTKCKGLPL TIKAVGGLLL CKDHVYHEWR RIAEHFQDEL RGNTSETDNV
401: MSSLQLSYDE LPSHLKSCIL TLSLYPEDCV IPKQQLVHGW IGEGFVMWRN GRSATESGED CFSGLTNRCL IEVVDKTYSG TIITCKIHDM VRDLVIDIAK
501: KDSFSNPEGL NCRHLGISGN FDEKQIKVNH KLRGVVSTTK TGEVNKLNSD LAKKFTDCKY LRVLDISKSI FDAPLSEILD EIASLQHLAC LSLSNTHPLI
601: QFPRSMEDLH NLQILDASYC QNLKQLQPCI VLFKKLLVLD MTNCGSLECF PKGIGSLVKL EVLLGFKPAR SNNGCKLSEV KNLTNLRKLG LSLTRGDQIE
701: EEELDSLINL SKLMSISINC YDSYGDDLIT KIDALTPPHQ LHELSLQFYP GKSSPSWLSP HKLPMLRYMS ICSGNLVKMQ EPFWGNENTH WRIEGLMLSS
801: LSDLDMDWEV LQQSMPYLRT VTANWCPELE SFAIEDVGFR GGVWMKTPLH RT

Arabidopsis Description

RPP13L4Disease resistance RPP13-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q38834]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.