Factsheet for TraesCS4A01G390400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G086300.1	Wheat	cytosol	99.21	99.21
TraesCS7A01G090500.1	Wheat	cytosol	99.21	98.43
HORVU7Hr1G020620.2	Barley	cytosol	98.41	97.13
Zm00001d036131_P001	Maize	cytosol	84.92	85.15
EER87820	Sorghum	cytosol	84.92	84.7
Os06t0142800-01	Rice	cytosol	84.92	84.47
GSMUA_Achr10P...	Banana	cytosol	71.96	71.77
PGSC0003DMT400059570	Potato	cytosol	64.55	65.77
VIT_11s0016g04830.t01	Wine grape	cytosol	58.47	65.58
Solyc08g067050.2.1	Tomato	cytosol	64.02	65.23
Bra022716.1-P	Field mustard	cytosol	62.43	62.93
AT1G04870.2	Thale cress	cytosol	63.49	62.66
CDY66138	Canola	cytosol, peroxisome, plastid	63.49	62.5
KRH54868	Soybean	cytosol	61.38	62.03
KRH63019	Soybean	cytosol	60.32	60.96
Bra036027.1-P	Field mustard	cytosol	23.28	58.28
CDY71180	Canola	cytosol	35.19	57.83
CDY71161	Canola	cytosol	21.16	54.79
TraesCS2A01G554100.1	Wheat	mitochondrion	33.07	31.97
TraesCS1A01G171700.1	Wheat	cytosol	31.48	29.97
TraesCS5A01G196000.2	Wheat	cytosol	29.37	29.21
TraesCS2A01G114100.1	Wheat	cytosol	29.63	20.9
TraesCS2A01G147100.1	Wheat	cytosol	29.1	18.3

Protein Annotations

Gene3D:2.70.160.11	Gene3D:3.40.50.150	MapMan:35.1	InterPro:Arg_MeTrfase	GO:GO:0003674	GO:GO:0003824
GO:GO:0006464	GO:GO:0006479	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987
GO:GO:0016740	GO:GO:0019538	InterPro:IPR025799	PFAM:PF06325	PFscan:PS51678	PANTHER:PTHR11006
PANTHER:PTHR11006:SF68	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	EnsemblPlantsGene:TraesCS4A01G390400	EnsemblPlants:TraesCS4A01G390400.1	TIGR:cd02440
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:-:667352170..667355327

Molecular Weight (calculated)

42402.4 Da

IEP (calculated)

5.740

GRAVY (calculated)

-0.259

Length

378 amino acids

Sequence
(BLAST)

001: MASLPNGAAA ASSAAGGAPP VDKEVDFANY FCTYAYLYHQ KEMLCDRVRM DAYHSAVFRN PHHFRGKVVL DVGTGSGILA IWSAQAGARK VYAVEATNVA
101: EHARELVRAN GVADIVEVIQ GTMEDIVLPE KVDVIISEWM GYYLLRESMF DSVICARDRW LNPGGVMYPS HARMWLAPIR SGLGDKKMED FEIAMNDWNH
201: FVEDTQAYYG VNMNALTKAY RAEHEKFYLK SSIWNNLHPN QLIGQPAVVK EMDCLTATVE EIREVRAQVT LPINQDRTRL AALAGWFDVH FRGSKQNPAV
301: EEVELNTAPD ENGGTHWGQQ VFLMTPSPRV NEGDSVNVSF SMVRSKENHR LMDMDITYEL HEASGRKLPA VATKIFLE

Best Arabidopsis Sequence Match ( AT1G04870.2 )
(BLAST)

001: MRSSQNGGAM GGRAAGTGGG GPSAPVDKEV DYAQYFCTYS FLYHQKDMLS DRVRMDAYFN AVFQNKHHFE GKTVLDVGTG SGILAIWSAQ AGARKVYAVE
101: ATKMADHARA LVKANNLDHI VEVIEGSVED ISLPEKVDVI ISEWMGYFLL RESMFDSVIS ARDRWLKPTG VMYPSHARMW LAPIKSNIAD RKRNDFDGAM
201: ADWHNFSDEI KSYYGVDMGV LTKPFAEEQE KYYIQTAMWN DLNPQQIIGT PTIVKEMDCL TASVSEIEEV RSNVTSVINM EHTRLCGFGG WFDVQFSGRK
301: EDPAQQEIEL TTAPSEQHCT HWGQQVFIMS NPINVEEGDN LNLGLLMSRS KENHRLMEIE LNCEIKEASG NPKESFKKTY FIE

Arabidopsis Description

PRMT10PRMT10 [Source:UniProtKB/TrEMBL;Acc:A0A178WKU5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.