Factsheet for VIT_11s0016g04830.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54868	Soybean	cytosol	83.09	74.87
KRH63019	Soybean	cytosol	82.79	74.6
Solyc08g067050.2.1	Tomato	cytosol	77.15	70.08
PGSC0003DMT400059570	Potato	cytosol	76.56	69.54
GSMUA_Achr10P...	Banana	cytosol	74.18	65.96
Bra022716.1-P	Field mustard	cytosol	71.81	64.53
AT1G04870.2	Thale cress	cytosol	72.11	63.45
CDY66138	Canola	cytosol, peroxisome, plastid	71.81	63.02
Bra036027.1-P	Field mustard	cytosol	27.89	62.25
CDY71161	Canola	cytosol	26.71	61.64
Os06t0142800-01	Rice	cytosol	68.55	60.79
Zm00001d036131_P001	Maize	cytosol	66.77	59.68
EER87820	Sorghum	cytosol	66.47	59.1
TraesCS4A01G390400.1	Wheat	cytosol	65.58	58.47
TraesCS7D01G086300.1	Wheat	cytosol	65.28	58.2
TraesCS7A01G090500.1	Wheat	cytosol	65.28	57.74
HORVU7Hr1G020620.2	Barley	cytosol	65.28	57.44
CDY71180	Canola	cytosol	35.91	52.61
VIT_10s0071g00750.t01	Wine grape	cytosol	37.09	30.19
VIT_11s0016g02530.t01	Wine grape	cytosol	30.27	29.14
VIT_05s0020g01540.t01	Wine grape	cytosol, plastid	31.75	20.38
VIT_13s0084g00650.t01	Wine grape	cytosol	31.75	17.01

Protein Annotations

EntrezGene:100262845	wikigene:100262845	Gene3D:2.70.160.11	Gene3D:3.40.50.150	MapMan:35.1	InterPro:Arg_MeTrfase
ProteinID:CBI28157	ProteinID:CBI28157.3	UniProt:D7TBX2	EMBL:FN595756	GO:GO:0000003	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0006139	GO:GO:0006355	GO:GO:0006464	GO:GO:0006479	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0008469	GO:GO:0009058	GO:GO:0009791	GO:GO:0009987
GO:GO:0010228	GO:GO:0016043	GO:GO:0016277	GO:GO:0016740	GO:GO:0019538	GO:GO:0019919
GO:GO:0032259	GO:GO:0034969	GO:GO:0035241	GO:GO:0035242	InterPro:IPR025799	EntrezGene:LOC100262845
wikigene:LOC100262845	PFAM:PF06325	PFscan:PS51678	PANTHER:PTHR11006	PANTHER:PTHR11006:SF68	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	TIGR:TC59267	TIGR:TC63354	UniParc:UPI0001BE32BC	ArrayExpress:VIT_11s0016g04830	EnsemblPlantsGene:VIT_11s0016g04830
EnsemblPlants:VIT_11s0016g04830.t01	unigene:Vvi.6478	RefSeq:XP_002285026	RefSeq:XP_002285026.1	:	:

Description

No Description!

Coordinates

chr11:-:4124624..4146076

Molecular Weight (calculated)

38461.8 Da

IEP (calculated)

5.815

GRAVY (calculated)

-0.336

Length

337 amino acids

Sequence
(BLAST)

001: MLSDRVRMDA YYNAIFENKH HFRGKKAVLD VGTGSGILAI WSAQAGARKV YAVEATKMSE HARELVKANN LQDIVEVIEG SVEDVTLPEK VDVIISEWMG
101: YFLLRESMFD SVISARDRWL KPTGVMYPSH ARMWMAPIRS GLVDQKKNDY EGSMNDWLCF VNETKNDYGV DMSVLTKPFS EEQRKYYLQT SLWNNLHPHQ
201: VVGTAAIIKE IDCLTATVDD ICEVRSNFSS SILIENTRLC GFGGWFDVHF RGRSDNPAQQ EIELTTAPSL DSSTHWGQQV FLLHPPFRTS EGDDVNVSFL
301: MNRSKENHRL MEVDLGCEIR QSSGKLLPLF KNKFYIE

Best Arabidopsis Sequence Match ( AT1G04870.2 )
(BLAST)

001: MRSSQNGGAM GGRAAGTGGG GPSAPVDKEV DYAQYFCTYS FLYHQKDMLS DRVRMDAYFN AVFQNKHHFE GKTVLDVGTG SGILAIWSAQ AGARKVYAVE
101: ATKMADHARA LVKANNLDHI VEVIEGSVED ISLPEKVDVI ISEWMGYFLL RESMFDSVIS ARDRWLKPTG VMYPSHARMW LAPIKSNIAD RKRNDFDGAM
201: ADWHNFSDEI KSYYGVDMGV LTKPFAEEQE KYYIQTAMWN DLNPQQIIGT PTIVKEMDCL TASVSEIEEV RSNVTSVINM EHTRLCGFGG WFDVQFSGRK
301: EDPAQQEIEL TTAPSEQHCT HWGQQVFIMS NPINVEEGDN LNLGLLMSRS KENHRLMEIE LNCEIKEASG NPKESFKKTY FIE

Arabidopsis Description

PRMT10PRMT10 [Source:UniProtKB/TrEMBL;Acc:A0A178WKU5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.