Factsheet for VIT_13s0084g00650.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0640000-01	Rice	cytosol	40.22	62.78
KRH30091	Soybean	nucleus	58.66	59.23
KRH62812	Soybean	cytosol	58.35	58.25
Bra001445.1-P	Field mustard	cytosol	27.66	58.19
Solyc01g096550.2.1	Tomato	cytosol	57.07	57.44
PGSC0003DMT400008488	Potato	nucleus	56.76	57.3
Bra034765.1-P	Field mustard	cytosol	52.15	55.31
CDY42140	Canola	cytosol	51.67	55.18
CDY00764	Canola	cytosol	50.4	55.13
CDY08441	Canola	cytosol	52.31	55.11
AT3G12270.1	Thale cress	cytosol	52.62	55.07
Zm00001d014027_P001	Maize	cytosol	16.06	54.3
CDX73828	Canola	cytosol	51.19	53.94
Zm00001d019697_P001	Maize	cytosol	52.31	53.93
GSMUA_Achr3P09300_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	56.12	53.89
TraesCS2A01G147100.1	Wheat	cytosol	50.24	52.58
TraesCS2B01G172600.1	Wheat	cytosol	50.24	52.58
TraesCS2D01G151900.1	Wheat	cytosol	50.4	52.48
EER96428	Sorghum	cytosol	51.19	52.36
HORVU2Hr1G026200.11	Barley	cytosol	49.44	50.49
CDY49141	Canola	nucleus	20.99	46.98
VIT_11s0016g02530.t01	Wine grape	cytosol	21.3	38.29
VIT_11s0016g04830.t01	Wine grape	cytosol	17.01	31.75
VIT_10s0071g00750.t01	Wine grape	cytosol	20.67	31.4
VIT_05s0020g01540.t01	Wine grape	cytosol, plastid	18.92	22.67
Os07t0640100-01	Rice	mitochondrion	0.48	2.29

Protein Annotations

EntrezGene:100253139	MapMan:17.1.4.1	Gene3D:2.70.160.11	Gene3D:3.40.50.150	InterPro:Arg_MeTrfase	ProteinID:CCB58640
ProteinID:CCB58640.1	UniProt:F6HVC8	EMBL:FN596254	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006355
GO:GO:0006464	GO:GO:0006479	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008469
GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0019538	GO:GO:0019919
GO:GO:0032259	GO:GO:0034969	GO:GO:0035242	InterPro:IPR025799	PFAM:PF12756	PFAM:PF13649
PFscan:PS51678	PANTHER:PTHR11006	PANTHER:PTHR11006:SF89	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	SUPFAM:SSF57667
TIGR:TC66808	UniParc:UPI0001985BA2	ArrayExpress:VIT_13s0084g00650	EnsemblPlantsGene:VIT_13s0084g00650	EnsemblPlants:VIT_13s0084g00650.t01	RefSeq:XP_010659086.1
InterPro:Znf_C2H2_sf	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr13:+:19770173..19777272

Molecular Weight (calculated)

69958.7 Da

IEP (calculated)

4.348

GRAVY (calculated)

-0.313

Length

629 amino acids

Sequence
(BLAST)

001: MEDPETVDRE FNDEEEDQDE DWGDWGADDN EEEESDPDFL CLFCDSKYSS CDALFEHCSS IHHFDFLSIR ETLSLDFYGS FKLINFVRSR VAENRCWSCG
101: LVCQSNQDLQ THLHETANFE EIKLHLDDDK YLNPFMQEDP LLYSFSQDEE GEDDDATALE KEEIMRDLRE FGEICIDDGD IIDALASDFD TLNEDRREGA
201: SASNGYYGME NISEKEIGSC IGAKEHVGSF KRKPKDKHLR VSFANVVSKE IKNVNENYFG AYSSFGIHRE MISDKVRMDA YRQAILNNPS LMKGATVLDV
301: GCGTGILSLF AAQAGASRVI AVEASEKMAS VATQVAKDNG LLCSASPNAG NNHYTGVIKV VQGMVEELDK SIESHSIDVL LSEWMGYCLL YESMLSSVLF
401: ARDHWLKPGG AILPDTATIF VAGFGRGGTS IPFWENVYGF NMSCVGKELV EDAAQTPIVD IVDSHDIVTD AAVLQTFDLV TMKPEEMDFT ASIRLQPKLD
501: HPADTNASMD LEQKPTWCHG VVLWFETGFT SRFCRETSTI LSTSPFTPKT HWSQTILTFR EPIAMAAGKP NAKKSGGVGS DACPASSVHL RISIIRAAQH
601: RSIDISLETT GIACDGRKHS WPVQIFNLS

Best Arabidopsis Sequence Match ( AT3G12270.1 )
(BLAST)

001: MAATMVKHEI LNYSEDEEEN YSDEGDWGDW KADDNGIEGG EEEEEDDGDD SESDFLCLFC DSHFVSCDLL FEHCRLSHGF DFHGVRKELK LDFYSSFKLI
101: NYIRSQVAEN MCFSWKIEAD DYKDVKFPWD EEKYLKPFWQ EDSLLYSFAD DEEDEEVTFD REEVMEELQK LGDLSIDVEA LGESSMSNSD KCNINGSKDV
201: TSLSNCNGLK QSSADDLIVN GKDAEPKVCD GRLVNRNIRK VNENYFGSYS SFGIHREMLS DKVRTEAYRD ALLKNPTLLN GSVVMDVGCG TGILSLFAAK
301: AGASRVVAVE ASEKMAKVAT KIAKDNKVFN DNEHNGVLEV AHSMVEELDK SIQIQPHSVD VLVSEWMGYC LLYESMLSSV LYARDRWLKP GGAILPDTAT
401: MFVAGFGKGA TSLPFWEDVY GFDMSSIGKE IHDDTTRLPI VDVIAERDLV TQPTLLQTFD LATMKPDEVD FTATATLEPT ESEAKTRLCH GVVLWFDTGF
501: TSRFCKENPT VLSTSPYTPP THWAQTILTF QEPISVAPAS VLSGNDRREA IGTEECPASS IHLRVSVARA HEHRSIDISL EATGLSSKGQ KRHWPVQIFN
601: L

Arabidopsis Description

PRMT3Probable protein arginine N-methyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q0WVD6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.