CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30091	Soybean	nucleus	91.59	92.62
Bra001445.1-P	Field mustard	cytosol	29.37	61.87
Os07t0640000-01	Rice	cytosol	37.46	58.56
VIT_13s0084g00650.t01	Wine grape	cytosol	58.25	58.35
Bra034765.1-P	Field mustard	cytosol	52.86	56.16
CDY08441	Canola	cytosol	53.17	56.11
AT3G12270.1	Thale cress	cytosol	53.49	56.07
CDY42140	Canola	cytosol	52.06	55.69
CDY00764	Canola	cytosol	50.79	55.65
PGSC0003DMT400008488	Potato	nucleus	53.97	54.57
Solyc01g096550.2.1	Tomato	cytosol	54.13	54.56
CDX73828	Canola	cytosol	51.27	54.1
Zm00001d014027_P001	Maize	cytosol	15.87	53.76
EER96428	Sorghum	cytosol	51.59	52.85
Zm00001d019697_P001	Maize	cytosol	50.63	52.3
KRH17553	Soybean	cytosol	6.98	51.16
TraesCS2B01G172600.1	Wheat	cytosol	48.73	51.08
TraesCS2D01G151900.1	Wheat	cytosol	48.89	50.99
GSMUA_Achr3P09300_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.54	50.53
TraesCS2A01G147100.1	Wheat	cytosol	48.1	50.42
HORVU2Hr1G026200.11	Barley	cytosol	46.67	47.73
CDY49141	Canola	nucleus	19.52	43.77
KRH40914	Soybean	cytosol, plastid	16.19	39.53
KRH74166	Soybean	nucleus	20.95	35.11
KRH49040	Soybean	nucleus	20.95	34.83
KRG89089	Soybean	nucleus	21.43	33.25
KRG90589	Soybean	cytosol, plastid	20.32	31.3
KRH11256	Soybean	endoplasmic reticulum	14.76	30.1
KRH54868	Soybean	cytosol	16.67	28.07
KRH63019	Soybean	cytosol	16.35	27.54
KRH02253	Soybean	cytosol	18.41	21.68
KRH50844	Soybean	cytosol	18.25	21.46
KRH37109	Soybean	cytosol	18.25	21.42
KRH12054	Soybean	cytosol	18.25	21.14
Os07t0640100-01	Rice	mitochondrion	0.32	1.53

Protein Annotations

EntrezGene:100781879	MapMan:17.1.4.1	Gene3D:2.70.160.11	Gene3D:3.40.50.150	EMBL:ACUP02002365	InterPro:Arg_MeTrfase
ncoils:Coil	EnsemblPlantsGene:GLYMA_04G133900	GO:GO:0003674	GO:GO:0003676	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139
GO:GO:0006355	GO:GO:0006464	GO:GO:0006479	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0008469	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0019538
GO:GO:0019919	GO:GO:0032259	GO:GO:0034969	GO:GO:0035242	UniProt:I1JW29	InterPro:IPR013087
InterPro:IPR025799	EnsemblPlants:KRH62812	ProteinID:KRH62812	ProteinID:KRH62812.1	PFAM:PF13649	ScanProsite:PS00028
PFscan:PS51678	PANTHER:PTHR11006	PANTHER:PTHR11006:SF89	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	SUPFAM:SSF57667
UniParc:UPI00023C05CF	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:+:19193942..19199175

Molecular Weight (calculated)

70555.7 Da

IEP (calculated)

4.331

GRAVY (calculated)

-0.309

Length

630 amino acids

Sequence
(BLAST)

001: MAFSDKQKQE EEEEPHRMEE DDDESEEEEE EEEEEEEEVW DDWEGEDEGE RESEFVCLFC DSRYSSCGSL FDHCASLHRF VFHTIRTTLS LDFYASFKLI
101: NFIRSRVAEN ICWSCGLTCQ SNCDLQNHLH DVVDFNEIKT LWNDDRYLIP FMQDDSLLYS FGDCDEDGED EHITRIDEDL IKDLMNIEES IHDDQDLVKK
201: VVVDDDKHEI DSVSNNHLNK ASSSKKLING KDSKGHVLCS DKDPEGHLMV NSQNHIAKHI KKINESYFGS YSSFGIHREM LSDKVRMDAY GQAILKNPSL
301: LNSAVVMDVG CGTGILSLFS AKAGASRVIA VEASAKMAAV ASQVAKDNGL LLSKSQNGVD GLQKGVIEVV HGMVEEIDKT VELQPRSVDV LLSEWMGYCL
401: LYESMLGSVL YARDRWLKPG GAILPDTATI FVAGFGKGAT SLPFWENVCD FDMSCIGNEL VIDAARIPIV DVVDSQDLVT CSAILQSFDL ATMKPNEVDF
501: TATATLELKP STSGTCCWCY GVVLWFDTGF SSRFCRETPA VLSTSPYMPR THWSQTILTF QEPIAMGFGK ENRGKPEAIG TEVYPAVKID LRVSIVRSTE
601: HRSIDISLEA AGVGPDSHKR SWPAQLFNLQ

Best Arabidopsis Sequence Match ( AT3G12270.1 )
(BLAST)

001: MAATMVKHEI LNYSEDEEEN YSDEGDWGDW KADDNGIEGG EEEEEDDGDD SESDFLCLFC DSHFVSCDLL FEHCRLSHGF DFHGVRKELK LDFYSSFKLI
101: NYIRSQVAEN MCFSWKIEAD DYKDVKFPWD EEKYLKPFWQ EDSLLYSFAD DEEDEEVTFD REEVMEELQK LGDLSIDVEA LGESSMSNSD KCNINGSKDV
201: TSLSNCNGLK QSSADDLIVN GKDAEPKVCD GRLVNRNIRK VNENYFGSYS SFGIHREMLS DKVRTEAYRD ALLKNPTLLN GSVVMDVGCG TGILSLFAAK
301: AGASRVVAVE ASEKMAKVAT KIAKDNKVFN DNEHNGVLEV AHSMVEELDK SIQIQPHSVD VLVSEWMGYC LLYESMLSSV LYARDRWLKP GGAILPDTAT
401: MFVAGFGKGA TSLPFWEDVY GFDMSSIGKE IHDDTTRLPI VDVIAERDLV TQPTLLQTFD LATMKPDEVD FTATATLEPT ESEAKTRLCH GVVLWFDTGF
501: TSRFCKENPT VLSTSPYTPP THWAQTILTF QEPISVAPAS VLSGNDRREA IGTEECPASS IHLRVSVARA HEHRSIDISL EATGLSSKGQ KRHWPVQIFN
601: L

Arabidopsis Description

PRMT3Probable protein arginine N-methyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q0WVD6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.