Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08441 | Canola | cytosol | 91.1 | 42.88 |
| CDY42140 | Canola | cytosol | 86.83 | 41.43 |
| AT3G12270.1 | Thale cress | cytosol | 73.67 | 34.44 |
| CDY00764 | Canola | cytosol | 68.68 | 33.57 |
| CDX73828 | Canola | cytosol | 70.82 | 33.33 |
| VIT_13s0084g00650.t01 | Wine grape | cytosol | 46.98 | 20.99 |
| KRH30091 | Soybean | nucleus | 43.42 | 19.58 |
| KRH62812 | Soybean | cytosol | 43.77 | 19.52 |
| GSMUA_Achr3P09300_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 43.06 | 18.47 |
| Solyc01g096550.2.1 | Tomato | cytosol | 40.93 | 18.4 |
| TraesCS2A01G147100.1 | Wheat | cytosol | 39.15 | 18.3 |
| TraesCS2D01G151900.1 | Wheat | cytosol | 39.15 | 18.21 |
| PGSC0003DMT400008488 | Potato | nucleus | 40.21 | 18.14 |
| TraesCS2B01G172600.1 | Wheat | cytosol | 38.43 | 17.97 |
| CDY42226 | Canola | endoplasmic reticulum, extracellular | 9.25 | 17.93 |
| Zm00001d019697_P001 | Maize | cytosol | 37.72 | 17.38 |
| EER96428 | Sorghum | cytosol | 37.01 | 16.91 |
| HORVU2Hr1G026200.11 | Barley | cytosol | 35.23 | 16.07 |
| CDY33443 | Canola | cytosol, endoplasmic reticulum, peroxisome | 10.68 | 11.76 |
| Os07t0640000-01 | Rice | cytosol | 16.73 | 11.66 |
| CDY71180 | Canola | cytosol | 9.25 | 11.3 |
| CDX82711 | Canola | cytosol | 12.1 | 9.42 |
| CDY35877 | Canola | cytosol | 12.1 | 9.37 |
| CDY06802 | Canola | cytosol | 12.81 | 9.25 |
| CDY24566 | Canola | cytosol | 13.88 | 9.13 |
| CDY27881 | Canola | mitochondrion | 7.83 | 9.02 |
| CDY43510 | Canola | cytosol | 12.46 | 8.97 |
| CDY30213 | Canola | cytosol | 12.1 | 8.7 |
| CDY47762 | Canola | cytosol | 11.74 | 8.51 |
| CDY25372 | Canola | cytosol | 12.81 | 8.43 |
| CDY36064 | Canola | cytosol | 12.46 | 8.2 |
| CDX82265 | Canola | cytosol | 12.1 | 8.0 |
| CDX85389 | Canola | cytosol | 14.23 | 7.65 |
| CDY33934 | Canola | cytosol | 13.88 | 7.37 |
| CDY05647 | Canola | cytosol | 13.52 | 7.18 |
| CDY05299 | Canola | cytosol | 13.52 | 7.17 |
| CDY24659 | Canola | cytosol | 13.52 | 7.14 |
| CDX86257 | Canola | cytosol, plastid | 12.81 | 6.88 |
| CDY66138 | Canola | cytosol, peroxisome, plastid | 9.25 | 6.77 |
| CDY51773 | Canola | nucleus | 17.08 | 5.35 |
| CDY14208 | Canola | cytosol | 6.05 | 5.17 |
| CDY03574 | Canola | cytosol | 3.56 | 3.48 |
| Zm00001d014027_P001 | Maize | cytosol | 0.36 | 0.54 |
| CDY71161 | Canola | cytosol | 0.0 | 0.0 |
| Os07t0640100-01 | Rice | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY49141 | EnsemblPlantsGene:GSBRNA2T00092379001 | Gene3D:3.40.50.150 | GO:A0A078IGJ9 | InterPro:SAM-dependent_MTases | InterPro:Znf_C2H2_sf |
| PANTHER:PTHR11006 | PANTHER:PTHR11006:SF89 | ProteinID:CDY49141 | ProteinID:CDY49141.1 | SEG:seg | SUPFAM:SSF53335 |
| SUPFAM:SSF57667 | UniParc:UPI0004EE769E | UniProt:A0A078IGJ9 | MapMan:35.1 | : | : |
Description
BnaC09g52040DBnaC09g52040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IGJ9]
Coordinates
chrLK032812:-:36771..38077
Molecular Weight (calculated)
32203.0 Da
IEP (calculated)
4.201
GRAVY (calculated)
-0.682
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAETKMVKD GVPNYSENDD EENFSEDGDW GDWEAADKDD DDFESDFVCL FCDSLFEHCR LSHGFDFHGV RKELKLDFYA SFKLINYIRS QVAENKCWSW
101: EALRKCHPEA KDVNFPWDEE KYLKPFLQED SLLYSFADDE EEEDEEEALD REDLIEDLRK LGDLSIVDDE AIGESSVSNN DKCKDVSLIS NCDDLKQSSA
201: YGLIVNRKGK EPRVCDARLV GRSIRKVNEN YFGSYNSFGI HREMISDKVR TDAYRDALLK NSSLMSGSVV MDVGCGTGIL R
101: EALRKCHPEA KDVNFPWDEE KYLKPFLQED SLLYSFADDE EEEDEEEALD REDLIEDLRK LGDLSIVDDE AIGESSVSNN DKCKDVSLIS NCDDLKQSSA
201: YGLIVNRKGK EPRVCDARLV GRSIRKVNEN YFGSYNSFGI HREMISDKVR TDAYRDALLK NSSLMSGSVV MDVGCGTGIL R
001: MAATMVKHEI LNYSEDEEEN YSDEGDWGDW KADDNGIEGG EEEEEDDGDD SESDFLCLFC DSHFVSCDLL FEHCRLSHGF DFHGVRKELK LDFYSSFKLI
101: NYIRSQVAEN MCFSWKIEAD DYKDVKFPWD EEKYLKPFWQ EDSLLYSFAD DEEDEEVTFD REEVMEELQK LGDLSIDVEA LGESSMSNSD KCNINGSKDV
201: TSLSNCNGLK QSSADDLIVN GKDAEPKVCD GRLVNRNIRK VNENYFGSYS SFGIHREMLS DKVRTEAYRD ALLKNPTLLN GSVVMDVGCG TGILSLFAAK
301: AGASRVVAVE ASEKMAKVAT KIAKDNKVFN DNEHNGVLEV AHSMVEELDK SIQIQPHSVD VLVSEWMGYC LLYESMLSSV LYARDRWLKP GGAILPDTAT
401: MFVAGFGKGA TSLPFWEDVY GFDMSSIGKE IHDDTTRLPI VDVIAERDLV TQPTLLQTFD LATMKPDEVD FTATATLEPT ESEAKTRLCH GVVLWFDTGF
501: TSRFCKENPT VLSTSPYTPP THWAQTILTF QEPISVAPAS VLSGNDRREA IGTEECPASS IHLRVSVARA HEHRSIDISL EATGLSSKGQ KRHWPVQIFN
601: L
101: NYIRSQVAEN MCFSWKIEAD DYKDVKFPWD EEKYLKPFWQ EDSLLYSFAD DEEDEEVTFD REEVMEELQK LGDLSIDVEA LGESSMSNSD KCNINGSKDV
201: TSLSNCNGLK QSSADDLIVN GKDAEPKVCD GRLVNRNIRK VNENYFGSYS SFGIHREMLS DKVRTEAYRD ALLKNPTLLN GSVVMDVGCG TGILSLFAAK
301: AGASRVVAVE ASEKMAKVAT KIAKDNKVFN DNEHNGVLEV AHSMVEELDK SIQIQPHSVD VLVSEWMGYC LLYESMLSSV LYARDRWLKP GGAILPDTAT
401: MFVAGFGKGA TSLPFWEDVY GFDMSSIGKE IHDDTTRLPI VDVIAERDLV TQPTLLQTFD LATMKPDEVD FTATATLEPT ESEAKTRLCH GVVLWFDTGF
501: TSRFCKENPT VLSTSPYTPP THWAQTILTF QEPISVAPAS VLSGNDRREA IGTEECPASS IHLRVSVARA HEHRSIDISL EATGLSSKGQ KRHWPVQIFN
601: L
Arabidopsis Description
PRMT3Probable protein arginine N-methyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q0WVD6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.