Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011118.1-P | Field mustard | cytosol | 98.97 | 98.72 |
| CDY43510 | Canola | cytosol | 98.97 | 98.72 |
| CDY30213 | Canola | cytosol | 93.57 | 93.09 |
| CDY47762 | Canola | cytosol | 92.8 | 93.04 |
| AT4G29510.1 | Thale cress | cytosol | 91.77 | 91.54 |
| CDY03574 | Canola | cytosol | 65.81 | 89.2 |
| CDY14208 | Canola | cytosol | 74.29 | 87.84 |
| CDX82711 | Canola | cytosol | 77.89 | 83.93 |
| CDY35877 | Canola | cytosol | 77.89 | 83.47 |
| Zm00001d020188_P001 | Maize | extracellular | 65.04 | 82.68 |
| VIT_11s0016g02530.t01 | Wine grape | cytosol | 72.24 | 80.29 |
| KRH74166 | Soybean | nucleus | 75.32 | 77.93 |
| KRH49040 | Soybean | nucleus | 75.58 | 77.57 |
| TraesCS5B01G187400.1 | Wheat | cytosol | 73.78 | 75.53 |
| TraesCS5A01G196000.2 | Wheat | cytosol | 73.78 | 75.53 |
| TraesCS5D01G195000.1 | Wheat | cytosol | 73.52 | 75.26 |
| Os09t0359800-01 | Rice | cytosol | 74.55 | 74.94 |
| HORVU5Hr1G056790.7 | Barley | cytosol | 73.78 | 74.93 |
| Solyc07g032240.2.1 | Tomato | cytosol | 71.72 | 74.4 |
| EER98789 | Sorghum | cytosol | 72.75 | 73.7 |
| PGSC0003DMT400000915 | Potato | cytosol | 74.55 | 73.23 |
| GSMUA_Achr6P22570_001 | Banana | cytosol | 73.01 | 73.2 |
| Solyc12g008760.1.1 | Tomato | cytosol | 74.29 | 72.98 |
| PGSC0003DMT400021726 | Potato | cytosol | 72.49 | 70.68 |
| CDY24566 | Canola | cytosol | 37.79 | 34.43 |
| CDY25372 | Canola | cytosol | 37.53 | 34.19 |
| CDX82265 | Canola | cytosol | 37.28 | 34.12 |
| CDY36064 | Canola | cytosol | 37.28 | 33.96 |
| CDY33443 | Canola | cytosol, endoplasmic reticulum, peroxisome | 20.05 | 30.59 |
| CDY66138 | Canola | cytosol, peroxisome, plastid | 29.82 | 30.21 |
| CDY27881 | Canola | mitochondrion | 16.97 | 27.05 |
| CDY42226 | Canola | endoplasmic reticulum, extracellular | 9.25 | 24.83 |
| CDY00764 | Canola | cytosol | 34.7 | 23.48 |
| CDY08441 | Canola | cytosol | 35.22 | 22.95 |
| CDY42140 | Canola | cytosol | 34.7 | 22.92 |
| CDX86257 | Canola | cytosol, plastid | 30.33 | 22.56 |
| CDX73828 | Canola | cytosol | 34.45 | 22.45 |
| CDX85389 | Canola | cytosol | 30.08 | 22.37 |
| CDY33934 | Canola | cytosol | 29.31 | 21.55 |
| CDY05647 | Canola | cytosol | 29.31 | 21.55 |
| CDY71180 | Canola | cytosol | 12.6 | 21.3 |
| CDY05299 | Canola | cytosol | 28.79 | 21.13 |
| CDY24659 | Canola | cytosol | 28.79 | 21.05 |
| CDY71161 | Canola | cytosol | 6.43 | 17.12 |
| CDY49141 | Canola | nucleus | 9.25 | 12.81 |
| CDY51773 | Canola | nucleus | 22.88 | 9.92 |
Protein Annotations
| MapMan:12.3.4.1 | Gene3D:2.70.160.11 | Gene3D:3.40.50.150 | GO:A0A078F0X4 | InterPro:Arg_MeTrfase | EnsemblPlants:CDY06802 |
| ProteinID:CDY06802 | ProteinID:CDY06802.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006479 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00123042001 | InterPro:IPR025799 | PFAM:PF06325 | PFscan:PS51678 | PANTHER:PTHR11006 | PANTHER:PTHR11006:SF53 |
| InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | UniParc:UPI0004EDD687 | SEG:seg | : | : |
Description
BnaC01g09010D
Coordinates
chrLK031973:-:363931..366099
Molecular Weight (calculated)
43873.0 Da
IEP (calculated)
4.710
GRAVY (calculated)
-0.310
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKKNNNNNE EEEFVSFGHN LNTKIRFEDA DEDEVAEGSG LEAAQDESMC EAGESTDAAE VTDDTTSADY YFDSYSHFGI HEEMLKDVVR TKTYQNVIYQ
101: NKFLIKDKIV LDVGAGTGIL SLFCAKAGAK HVYAVECSQM ADMAKEIVKA NGFSDVITVL KGKIEEIELP TPKVDVIISE WMGYFLLFEN MLDSVIYARN
201: KWLVDGGIVL PDKASLFLTA IEDSEYKEDK IEFWNSVYGF DMSCIKKKAM MEPLVDTVDQ NQIVTDSKLL KTMDISKMSS GDASFTAPFK LVAQRNDYIH
301: ALVAYFDVSF TMCHKLLGFS TGPRSRATHW KQTVMYLEDV LTICEGETIT GSMSVSYNKK NPRDVDIKLS YSLNGQHSKV SRTQHYKMR
101: NKFLIKDKIV LDVGAGTGIL SLFCAKAGAK HVYAVECSQM ADMAKEIVKA NGFSDVITVL KGKIEEIELP TPKVDVIISE WMGYFLLFEN MLDSVIYARN
201: KWLVDGGIVL PDKASLFLTA IEDSEYKEDK IEFWNSVYGF DMSCIKKKAM MEPLVDTVDQ NQIVTDSKLL KTMDISKMSS GDASFTAPFK LVAQRNDYIH
301: ALVAYFDVSF TMCHKLLGFS TGPRSRATHW KQTVMYLEDV LTICEGETIT GSMSVSYNKK NPRDVDIKLS YSLNGQHSKV SRTQHYKMR
001: MTKNSNHDEN EFISFEPNQN TKIRFEDADE DEVAEGSGVA GEETPQDESM FDAGESADTA EVTDDTTSAD YYFDSYSHFG IHEEMLKDVV RTKTYQNVIY
101: QNKFLIKDKI VLDVGAGTGI LSLFCAKAGA AHVYAVECSQ MADMAKEIVK ANGFSDVITV LKGKIEEIEL PTPKVDVIIS EWMGYFLLFE NMLDSVLYAR
201: DKWLVEGGVV LPDKASLHLT AIEDSEYKED KIEFWNSVYG FDMSCIKKKA MMEPLVDTVD QNQIVTDSRL LKTMDISKMS SGDASFTAPF KLVAQRNDYI
301: HALVAYFDVS FTMCHKLLGF STGPKSRATH WKQTVLYLED VLTICEGETI TGTMSVSPNK KNPRDIDIKL SYSLNGQHCK ISRTQHYKMR
101: QNKFLIKDKI VLDVGAGTGI LSLFCAKAGA AHVYAVECSQ MADMAKEIVK ANGFSDVITV LKGKIEEIEL PTPKVDVIIS EWMGYFLLFE NMLDSVLYAR
201: DKWLVEGGVV LPDKASLHLT AIEDSEYKED KIEFWNSVYG FDMSCIKKKA MMEPLVDTVD QNQIVTDSRL LKTMDISKMS SGDASFTAPF KLVAQRNDYI
301: HALVAYFDVS FTMCHKLLGF STGPKSRATH WKQTVLYLED VLTICEGETI TGTMSVSPNK KNPRDIDIKL SYSLNGQHCK ISRTQHYKMR
Arabidopsis Description
PRMT11Protein arginine N-methyltransferase 1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU94]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.