CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER98789
EES06036
KXG20767

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G19670.1	EES06036	AT4G25630.1	17666011
AT2G19670.1	KXG20767	AT4G25630.1	17666011
AT4G29510.1	EES06036	AT4G25630.1	17666011
AT4G29510.1	KXG20767	AT4G25630.1	17666011
AT4G29510.1	EER98789	AT4G29510.1	17666011

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020188_P001	Maize	extracellular	77.34	97.06
TraesCS5B01G187400.1	Wheat	cytosol	86.2	87.11
TraesCS5A01G196000.2	Wheat	cytosol	85.94	86.84
Os09t0359800-01	Rice	cytosol	87.5	86.82
HORVU5Hr1G056790.7	Barley	cytosol	86.46	86.68
TraesCS5D01G195000.1	Wheat	cytosol	85.68	86.58
VIT_11s0016g02530.t01	Wine grape	cytosol	74.22	81.43
KRH74166	Soybean	nucleus	76.3	77.93
GSMUA_Achr6P22570_001	Banana	cytosol	78.39	77.58
KRH49040	Soybean	nucleus	76.3	77.31
Solyc07g032240.2.1	Tomato	cytosol	73.18	74.93
CDY14208	Canola	cytosol	64.06	74.77
CDX82711	Canola	cytosol	69.79	74.24
AT2G19670.1	Thale cress	cytosol	70.31	73.77
CDY35877	Canola	cytosol	69.53	73.55
Bra039010.1-P	Field mustard	cytosol	69.53	73.55
CDY03574	Canola	cytosol	54.69	73.17
CDY43510	Canola	cytosol	74.22	73.08
Bra011118.1-P	Field mustard	cytosol	74.22	73.08
PGSC0003DMT400000915	Potato	cytosol	75.26	72.98
AT4G29510.1	Thale cress	cytosol	73.96	72.82
CDY06802	Canola	cytosol	73.7	72.75
Solyc12g008760.1.1	Tomato	cytosol	75.0	72.73
CDY47762	Canola	cytosol	73.18	72.42
Bra024143.1-P	Field mustard	cytosol	73.18	72.24
CDY30213	Canola	cytosol	72.66	71.36
PGSC0003DMT400021726	Potato	cytosol	73.7	70.93
Bra010325.1-P	Field mustard	cytosol	30.99	69.19
EES11648	Sorghum	mitochondrion	36.98	36.6
OQU91600	Sorghum	cytosol	35.68	33.99
EER87820	Sorghum	cytosol	28.65	29.02
EER96428	Sorghum	cytosol	34.64	21.63
EER97694	Sorghum	cytosol	28.91	20.56

Protein Annotations

MapMan:12.3.4.1	Gene3D:2.70.160.11	Gene3D:3.40.50.150	EntrezGene:8055563	InterPro:Arg_MeTrfase	UniProt:C5XAM2
EnsemblPlants:EER98789	ProteinID:EER98789	ProteinID:EER98789.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006355
GO:GO:0006464	GO:GO:0006479	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008469
GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0019538	GO:GO:0019919
GO:GO:0032259	GO:GO:0034969	GO:GO:0035242	InterPro:IPR025799	PFAM:PF13649	PFscan:PS51678
PANTHER:PTHR11006	PANTHER:PTHR11006:SF53	InterPro:SAM-dependent_MTases	EnsemblPlantsGene:SORBI_3002G179000	SUPFAM:SSF53335	unigene:Sbi.5267
UniParc:UPI0001A83DF4	RefSeq:XP_002462268.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:56013023..56017348

Molecular Weight (calculated)

43191.5 Da

IEP (calculated)

4.809

GRAVY (calculated)

-0.270

Length

384 amino acids

Sequence
(BLAST)

001: MDRRKGSNRD ANGGLAEATA SRLRFDTEEE AEEVGMEVEE SLDAEGEDGQ ASAEVIGSEK TSADYYFDSY SHFGIHEEML KDVVRTKTYQ NVIFQNSFLI
101: KDKVVLDVGA GTGILSLFCA KAGAKHVYAI ECSQMADMAK EIVKSNGYSD VITVIKGKVE EIELPVPKVD VIISEWMGYF LLFENMLNTV LYARDKWLAD
201: GGVVLPDKTS LRLTAIEDAE YKEDKIEFWN NVYGFDMSCI KKQAMMEPLV DTVDANQIVT NCQLLKTMDI SKMTPGDASF TVPFKLVAER NDYIHALVAY
301: FDVSFTKCHK LMGFSTGPRS KATHWKQTVL YLEDVITICQ GETLTGSMTV TPNKNNPRDI DIKLKYSIDG HRCQVSRTQF YKMR

Best Arabidopsis Sequence Match ( AT4G29510.1 )
(BLAST)

001: MTKNSNHDEN EFISFEPNQN TKIRFEDADE DEVAEGSGVA GEETPQDESM FDAGESADTA EVTDDTTSAD YYFDSYSHFG IHEEMLKDVV RTKTYQNVIY
101: QNKFLIKDKI VLDVGAGTGI LSLFCAKAGA AHVYAVECSQ MADMAKEIVK ANGFSDVITV LKGKIEEIEL PTPKVDVIIS EWMGYFLLFE NMLDSVLYAR
201: DKWLVEGGVV LPDKASLHLT AIEDSEYKED KIEFWNSVYG FDMSCIKKKA MMEPLVDTVD QNQIVTDSRL LKTMDISKMS SGDASFTAPF KLVAQRNDYI
301: HALVAYFDVS FTMCHKLLGF STGPKSRATH WKQTVLYLED VLTICEGETI TGTMSVSPNK KNPRDIDIKL SYSLNGQHCK ISRTQHYKMR

Arabidopsis Description

PRMT11Protein arginine N-methyltransferase 1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU94]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.