CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
golgi 1
mitochondrion 5
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026614_P001	Maize	mitochondrion	92.78	93.02
TraesCS2B01G590000.1	Wheat	mitochondrion	80.67	82.37
TraesCS2A01G554100.1	Wheat	mitochondrion	82.73	82.1
TraesCS2D01G560200.1	Wheat	mitochondrion	82.99	81.93
Os04t0677066-00	Rice	nucleus	81.19	80.15
HORVU2Hr1G119480.1	Barley	cytosol	67.01	68.78
KRH17553	Soybean	cytosol	14.95	67.44
KRG89089	Soybean	nucleus	62.11	59.36
VIT_10s0071g00750.t01	Wine grape	cytosol	60.31	56.52
OQU91600	Sorghum	cytosol	57.99	55.83
CDY36064	Canola	cytosol	59.79	54.33
Solyc04g008860.2.1	Tomato	nucleus	60.31	54.29
CDX82265	Canola	cytosol	59.02	53.88
Bra035822.1-P	Field mustard	cytosol	59.02	53.63
CDY25372	Canola	cytosol	59.02	53.63
CDY24566	Canola	cytosol	58.76	53.4
KRH40914	Soybean	cytosol, plastid	35.31	53.1
Bra001772.1-P	Field mustard	cytosol	59.02	52.77
KRH11256	Soybean	endoplasmic reticulum	41.75	52.43
AT3G20020.3	Thale cress	cytosol	59.02	51.69
KRG90589	Soybean	cytosol, plastid	52.58	49.88
CDY33443	Canola	cytosol, endoplasmic reticulum, peroxisome	26.29	40.0
EER98789	Sorghum	cytosol	36.6	36.98
EER87820	Sorghum	cytosol	34.28	35.09
CDY42226	Canola	endoplasmic reticulum, extracellular	10.82	28.97
EER96428	Sorghum	cytosol	32.73	20.65
EER97694	Sorghum	cytosol	28.61	20.56

Protein Annotations

Gene3D:2.70.160.11	Gene3D:3.40.50.150	MapMan:35.1	EntrezGene:8085867	InterPro:Arg_MeTrfase	UniProt:C5YAI3
EnsemblPlants:EES11648	ProteinID:EES11648	ProteinID:EES11648.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006355
GO:GO:0006464	GO:GO:0006479	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008469
GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0019538	GO:GO:0019919
GO:GO:0032259	GO:GO:0034969	GO:GO:0035242	InterPro:IPR025799	PFAM:PF06325	PFscan:PS51678
PANTHER:PTHR11006	PANTHER:PTHR11006:SF70	InterPro:SAM-dependent_MTases	EnsemblPlantsGene:SORBI_3006G266700	SUPFAM:SSF53335	UniParc:UPI0001A87318
RefSeq:XP_002447320.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:60022668..60028780

Molecular Weight (calculated)

43261.6 Da

IEP (calculated)

5.566

GRAVY (calculated)

-0.151

Length

388 amino acids

Sequence
(BLAST)

001: MLPSHLNGHS ALGRGRPRLS AAAASGDFAA AGIGAAAPLE EHDRIYFQSY SHLGIHEAMI KDRVRTDAYH TAIMRHQKFV EGKVVLDVGC GTGILSVFCA
101: RAGAKRVYAI EASEIAVQAR EIVKANNLTD QVVVIHGRVE DVDLEEKVDV IISEWMGYML LYESMLPSVL FARDKWLKPG GLILPSHATL FMAPITNPER
201: YESSVDFWRD VYGINMSALV PLAKKFTSEE PSIETIGGEN VISWPAVFKH IDCYNFTAEE FKSITTKYKV SSMMLAPIHG FGFWFEVEFN GPAESSHNFP
301: SNLDPLEIIQ KKRRRSSEDA VLSTAPEDEP THWQQTILYF PDPIEVKQDQ IIEGSVTVSQ SEENPRFLNI HLECTTGGQT LVKDCAMR

Best Arabidopsis Sequence Match ( AT2G19670.1 )
(BLAST)

001: MTSTENNNNG SDETQTTKLH FEDADESMHD GDDNNADVAD DITSADYYFD SYSHFGIHEE MLKDVVRTKS YQDVIYKNKF LIKDKIVLDV GAGTGILSLF
101: CAKAGAAHVY AVECSQMADT AKEIVKSNGF SDVITVLKGK IEEIELPVPK VDVIISEWMG YFLLYENMLD TVLYARNKWL VDGGIVLPDK ASLYVTAIED
201: AHYKDDKVEF WDDVYGFDMS CIKRRAITEP LVDTVDGNQI VTDSKLLKTM DISKMAAGDA SFTAPFKLVA QRNDHIHALV AYFDVSFTMC HKKMGFSTGP
301: KSRATHWKQT VLYLEDVLTI CEGETITGSM TIAQNKKNPR DVDIKLSYSL NGQHCNISRT HFYKMR

Arabidopsis Description

PRMT12Probable protein arginine N-methyltransferase 1.2 [Source:UniProtKB/Swiss-Prot;Acc:O82210]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.