Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 1
- cytosol 3
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36064 | Canola | cytosol | 85.33 | 88.52 |
| CDY25372 | Canola | cytosol | 85.1 | 88.29 |
| Bra035822.1-P | Field mustard | cytosol | 84.65 | 87.82 |
| CDY24566 | Canola | cytosol | 84.42 | 87.59 |
| CDX82265 | Canola | cytosol | 83.97 | 87.53 |
| Bra001772.1-P | Field mustard | cytosol | 85.1 | 86.87 |
| KRH17553 | Soybean | cytosol | 15.58 | 80.23 |
| GSMUA_AchrUn_... | Banana | cytosol, vacuole | 8.35 | 72.55 |
| KRG89089 | Soybean | nucleus | 64.33 | 70.2 |
| VIT_10s0071g00750.t01 | Wine grape | cytosol | 64.11 | 68.6 |
| Solyc04g008860.2.1 | Tomato | nucleus | 66.14 | 67.98 |
| KRH40914 | Soybean | cytosol, plastid | 38.83 | 66.67 |
| TraesCS1B01G185000.1 | Wheat | peroxisome | 42.66 | 64.73 |
| GSMUA_AchrUn_... | Banana | cytosol | 34.99 | 64.05 |
| TraesCS2B01G590000.1 | Wheat | mitochondrion | 52.37 | 61.05 |
| TraesCS1A01G171700.1 | Wheat | cytosol | 54.4 | 60.71 |
| Os10t0489100-01 | Rice | cytosol, nucleus | 53.95 | 60.51 |
| TraesCS1D01G172200.1 | Wheat | cytosol | 54.18 | 60.45 |
| OQU91600 | Sorghum | cytosol | 54.85 | 60.3 |
| TraesCS2A01G554100.1 | Wheat | mitochondrion | 52.82 | 59.85 |
| Zm00001d032633_P004 | Maize | mitochondrion | 53.95 | 59.31 |
| TraesCS2D01G560200.1 | Wheat | mitochondrion | 52.6 | 59.29 |
| EES11648 | Sorghum | mitochondrion | 51.69 | 59.02 |
| Zm00001d026614_P001 | Maize | mitochondrion | 49.89 | 57.11 |
| KRH11256 | Soybean | endoplasmic reticulum | 39.73 | 56.96 |
| HORVU1Hr1G044440.3 | Barley | plastid | 53.72 | 56.26 |
| Os04t0677066-00 | Rice | nucleus | 49.89 | 56.23 |
| KRG90589 | Soybean | cytosol, plastid | 51.69 | 55.99 |
| CDY33443 | Canola | cytosol, endoplasmic reticulum, peroxisome | 31.38 | 54.51 |
| HORVU2Hr1G119480.1 | Barley | cytosol | 46.28 | 54.23 |
| GSMUA_Achr5P10850_001 | Banana | cytosol, golgi, plastid | 37.92 | 50.91 |
| GSMUA_Achr5P10840_001 | Banana | cytosol | 47.86 | 48.51 |
| CDY42226 | Canola | endoplasmic reticulum, extracellular | 13.54 | 41.38 |
| AT2G19670.1 | Thale cress | cytosol | 31.6 | 38.25 |
| AT4G29510.1 | Thale cress | cytosol | 32.73 | 37.18 |
| AT1G04870.2 | Thale cress | cytosol | 31.15 | 36.03 |
| AT3G12270.1 | Thale cress | cytosol | 32.73 | 24.13 |
| AT3G06930.2 | Thale cress | cytosol | 27.99 | 23.18 |
| AT5G49020.1 | Thale cress | cytosol | 25.51 | 21.4 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:35.1 | EntrezGene:821541 | UniProt:A0A178VA69 | UniProt:A0A1I9LPC6 | ProteinID:ANM64434.1 |
| ArrayExpress:AT3G20020 | EnsemblPlantsGene:AT3G20020 | RefSeq:AT3G20020 | TAIR:AT3G20020 | RefSeq:AT3G20020-TAIR-G | EnsemblPlants:AT3G20020.3 |
| Symbol:ATPRMT6 | InterPro:Arg_MeTrfase | Unigene:At.38316 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 |
| GO:GO:0006479 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009987 | GO:GO:0016740 |
| GO:GO:0019538 | GO:GO:0032259 | InterPro:IPR025799 | RefSeq:NP_001326463.1 | ProteinID:OAP01893.1 | PFAM:PF06325 |
| PFscan:PS51678 | PANTHER:PTHR11006 | PANTHER:PTHR11006:SF70 | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | UniParc:UPI0007E09D0D |
| SEG:seg | : | : | : | : | : |
Description
ATPRMT6PRMT6 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPC6]
Coordinates
chr3:-:6983705..6988101
Molecular Weight (calculated)
49374.5 Da
IEP (calculated)
5.664
GRAVY (calculated)
-0.278
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSGGDFSNG FHGDHHRELE LEDKQGPSLS SFGRAKKRSH AGARDPRGGL ANVLRVSDQL GEHKSLETSE SSPPPCTDFD VAYFHSYAHV GIHEEMIKDR
101: ARTETYREAI MQHQSLIEGK VVVDVGCGTG ILSIFCAQAG AKRVYAVDAS DIAVQAKEVV KANGLSDKVI VLHGRVEDVE IDEEVDVIIS EWMGYMLLYE
201: SMLGSVITAR DRWLKPGGLI LPSHATLYMA PISHPDRYSH SIDFWRNVYG IDMSAMMQLA KQCAFEEPSV ESISGENVLT WPEVVKHIDC KTIKIQELDS
301: VTARYKFNSM MRAPMHGFAF WFDVEFSGPA SSPAKNTSET SIASGSSSIS PSGEVNQKKR TNPSDALVLS TSPESPPTHW QQTIVYFYDP IDVEQDQVIE
401: GSVTLSQSKE NKRFMNIHLE YSLVATLFHP FQFFFKFPPM LIL
101: ARTETYREAI MQHQSLIEGK VVVDVGCGTG ILSIFCAQAG AKRVYAVDAS DIAVQAKEVV KANGLSDKVI VLHGRVEDVE IDEEVDVIIS EWMGYMLLYE
201: SMLGSVITAR DRWLKPGGLI LPSHATLYMA PISHPDRYSH SIDFWRNVYG IDMSAMMQLA KQCAFEEPSV ESISGENVLT WPEVVKHIDC KTIKIQELDS
301: VTARYKFNSM MRAPMHGFAF WFDVEFSGPA SSPAKNTSET SIASGSSSIS PSGEVNQKKR TNPSDALVLS TSPESPPTHW QQTIVYFYDP IDVEQDQVIE
401: GSVTLSQSKE NKRFMNIHLE YSLVATLFHP FQFFFKFPPM LIL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.