CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25372	Canola	cytosol	97.42	97.42
CDY36064	Canola	cytosol	92.04	92.04
CDX82265	Canola	cytosol	90.4	90.82
AT3G20020.3	Thale cress	cytosol	87.59	84.42
KRH17553	Soybean	cytosol	15.69	77.91
GSMUA_AchrUn_...	Banana	cytosol, vacuole	8.67	72.55
KRG89089	Soybean	nucleus	68.15	71.67
Solyc04g008860.2.1	Tomato	nucleus	70.96	70.3
VIT_10s0071g00750.t01	Wine grape	cytosol	67.92	70.05
KRH40914	Soybean	cytosol, plastid	40.28	66.67
GSMUA_AchrUn_...	Banana	cytosol	37.7	66.53
TraesCS1B01G185000.1	Wheat	peroxisome	45.2	66.1
Os10t0489100-01	Rice	cytosol, nucleus	57.38	62.03
OQU91600	Sorghum	cytosol	58.31	61.79
TraesCS1A01G171700.1	Wheat	cytosol	57.38	61.71
TraesCS1D01G172200.1	Wheat	cytosol	57.14	61.46
Zm00001d032633_P004	Maize	mitochondrion	57.14	60.55
TraesCS2B01G590000.1	Wheat	mitochondrion	52.69	59.21
EES11648	Sorghum	mitochondrion	53.4	58.76
TraesCS2A01G554100.1	Wheat	mitochondrion	53.63	58.57
TraesCS2D01G560200.1	Wheat	mitochondrion	53.63	58.27
Zm00001d026614_P001	Maize	mitochondrion	51.76	57.11
HORVU1Hr1G044440.3	Barley	plastid	56.21	56.74
KRG90589	Soybean	cytosol, plastid	54.33	56.72
KRH11256	Soybean	endoplasmic reticulum	40.98	56.63
Os04t0677066-00	Rice	nucleus	51.76	56.23
CDY33443	Canola	cytosol, endoplasmic reticulum, peroxisome	31.85	53.33
HORVU2Hr1G119480.1	Barley	cytosol	46.6	52.65
GSMUA_Achr5P10850_001	Banana	cytosol, golgi, plastid	38.64	50.0
GSMUA_Achr5P10840_001	Banana	cytosol	50.35	49.2
CDY42226	Canola	endoplasmic reticulum, extracellular	14.52	42.76
CDY14208	Canola	cytosol	29.27	37.99
CDX82711	Canola	cytosol	32.08	37.95
CDY06802	Canola	cytosol	34.43	37.79
CDY35877	Canola	cytosol	32.08	37.74
CDY43510	Canola	cytosol	34.19	37.44
CDY47762	Canola	cytosol	33.49	36.86
CDY30213	Canola	cytosol	33.26	36.32
CDY03574	Canola	cytosol	24.36	36.24
CDY66138	Canola	cytosol, peroxisome, plastid	32.32	35.94
CDY71161	Canola	cytosol	9.37	27.4
CDY71180	Canola	cytosol	14.75	27.39
CDY00764	Canola	cytosol	34.43	25.57
CDX73828	Canola	cytosol	35.13	25.13
CDY08441	Canola	cytosol	34.19	24.46
CDY42140	Canola	cytosol	33.72	24.45
CDY27881	Canola	mitochondrion	13.58	23.77
CDX86257	Canola	cytosol, plastid	27.4	22.37
CDY24659	Canola	cytosol	27.63	22.18
CDY05299	Canola	cytosol	27.4	22.08
CDX85389	Canola	cytosol	26.93	21.99
CDY33934	Canola	cytosol	27.17	21.93
CDY05647	Canola	cytosol	27.17	21.93
CDY49141	Canola	nucleus	9.13	13.88
CDY51773	Canola	nucleus	23.42	11.15

Protein Annotations

Gene3D:2.70.160.11	Gene3D:3.40.50.150	MapMan:35.1	GO:A0A078GGU2	UniProt:A0A078GGU2	InterPro:Arg_MeTrfase
EnsemblPlants:CDY24566	ProteinID:CDY24566	ProteinID:CDY24566.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464
GO:GO:0006479	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016740
GO:GO:0019538	GO:GO:0032259	EnsemblPlantsGene:GSBRNA2T00026895001	InterPro:IPR025799	PFAM:PF06325	PFscan:PS51678
PANTHER:PTHR11006	PANTHER:PTHR11006:SF70	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0004EEF92F	SEG:seg

Description

BnaC05g32500DBnaC05g32500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GGU2]

Coordinates

chrLK032161:+:49081..52984

Molecular Weight (calculated)

47653.4 Da

IEP (calculated)

5.915

GRAVY (calculated)

-0.383

Length

427 amino acids

Sequence
(BLAST)

001: MQSGGDYTNG FHGGLQRDEK QVPVLSSLGR AKRRSRGGAR DPRGGLTNGE LRVSDQISEQ KPRETQESPP PCTDFDVAYF HSYAHVGIHE EMIKDRARTE
101: TYREAIMQHQ SLIQGKVVVD VGCGTGILSI FCAQAGAKRV YAVDASDIAV QANEVVKANG LSDKVIVLHG RVEDVEIGEE VDVIISEWMG YMLLYESMLG
201: SVITARDRWL KPGGLILPSH ASLYMAPISH PDRYSHSIDF WRNVYGIDMS AMMQLAKQCA FEEPSVESIS GETVLTWPEV VKHIDCQTIK IQELDSVTAR
301: YKFKSMMRAP MHGFAFWFDV EFSEPAKNTN ATSVANGSSS ISPFTEGNQK KRSNPNDALV LSTSPEAPPT HWQQTIVYFY DPIDVEQDQV IEGSVTLSQS
401: KENRRFMNIH LEYTSAGRSF VKESVMR

Best Arabidopsis Sequence Match ( AT3G20020.1 )
(BLAST)

001: MQSGGDFSNG FHGDHHRELE LEDKQGPSLS SFGRAKKRSH AGARDPRGGL ANVLRVSDQL GEHKSLETSE SSPPPCTDFD VAYFHSYAHV GIHEEMIKDR
101: ARTETYREAI MQHQSLIEGK VVVDVGCGTG ILSIFCAQAG AKRVYAVDAS DIAVQAKEVV KANGLSDKVI VLHGRVEDVE IDEEVDVIIS EWMGYMLLYE
201: SMLGSVITAR DRWLKPGGLI LPSHATLYMA PISHPDRYSH SIDFWRNVYG IDMSAMMQLA KQCAFEEPSV ESISGENVLT WPEVVKHIDC KTIKIQELDS
301: VTARYKFNSM MRAPMHGFAF WFDVEFSGPA SSPAKNTSET SIASGSSSIS PSGEVNQKKR TNPSDALVLS TSPESPPTHW QQTIVYFYDP IDVEQDQVIE
401: GSVTLSQSKE NKRFMNIHLE YSSAGRSFVK ESVMR

Arabidopsis Description

ATPRMT6PRMT6 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPC6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.