CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
peroxisome 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015140.1-P	Field mustard	mitochondrion	100.0	100.0
PGSC0003DMT400021779	Potato	cytosol	43.44	25.79
CDX86257	Canola	cytosol, plastid	53.69	25.05
CDX85389	Canola	cytosol	53.28	24.86
CDY05647	Canola	cytosol	52.46	24.2
CDY33934	Canola	cytosol	52.05	24.01
AT5G49020.1	Thale cress	cytosol	51.64	23.86
GSMUA_Achr11P...	Banana	cytosol	44.26	23.33
VIT_05s0020g01540.t01	Wine grape	cytosol, plastid	47.95	22.29
KRH02253	Soybean	cytosol	47.54	21.68
Solyc12g099560.1.1	Tomato	extracellular	46.31	21.65
CDY24659	Canola	cytosol	47.13	21.62
CDY05299	Canola	cytosol	46.72	21.51
KRH50844	Soybean	cytosol	47.13	21.46
PGSC0003DMT400012001	Potato	plastid	45.49	21.31
KRH37109	Soybean	cytosol	46.72	21.23
Os07t0671700-01	Rice	plasma membrane	45.49	21.02
KRH12054	Soybean	cytosol	46.72	20.96
EER97694	Sorghum	cytosol	45.9	20.74
Solyc05g054240.2.1	Tomato	cytosol	44.67	20.68
GSMUA_Achr11P...	Banana	cytosol	43.85	19.81
Zm00001d007133_P002	Maize	cytosol	44.26	19.71
TraesCS2B01G133300.3	Wheat	cytosol	43.03	19.66
TraesCS2A01G114100.1	Wheat	cytosol	43.03	19.59
HORVU2Hr1G019780.1	Barley	cytosol, mitochondrion	42.62	19.59
TraesCS2D01G114900.1	Wheat	cytosol	43.03	18.99
CDY35877	Canola	cytosol	26.23	17.63
CDX82711	Canola	cytosol	25.82	17.45
CDY06802	Canola	cytosol	27.05	16.97
CDY33443	Canola	cytosol, endoplasmic reticulum, peroxisome	17.62	16.86
CDY43510	Canola	cytosol	26.64	16.67
CDY30213	Canola	cytosol	26.23	16.37
CDY47762	Canola	cytosol	25.82	16.24
CDY42226	Canola	endoplasmic reticulum, extracellular	9.43	15.86
CDY14208	Canola	cytosol	21.31	15.81
CDY66138	Canola	cytosol, peroxisome, plastid	24.59	15.62
CDY03574	Canola	cytosol	17.62	14.98
CDY25372	Canola	cytosol	23.77	13.58
CDY24566	Canola	cytosol	23.77	13.58
CDX82265	Canola	cytosol	23.36	13.41
CDY36064	Canola	cytosol	23.36	13.35
CDY00764	Canola	cytosol	26.23	11.13
CDY08441	Canola	cytosol	26.64	10.89
CDY42140	Canola	cytosol	26.23	10.87
CDX73828	Canola	cytosol	26.23	10.72
Zm00001d022469_P001	Maize	plasma membrane	44.26	10.13
CDY71180	Canola	cytosol	9.43	10.0
CDY51773	Canola	nucleus	32.38	8.81
CDY49141	Canola	nucleus	9.02	7.83
CDY71161	Canola	cytosol	2.46	4.11

Protein Annotations

EnsemblPlants:CDY27881	EnsemblPlantsGene:GSBRNA2T00038730001	Gene3D:3.40.50.150	GO:A0A078GR34	InterPro:SAM-dependent_MTases	PANTHER:PTHR11006
PANTHER:PTHR11006:SF10	ProteinID:CDY27881	ProteinID:CDY27881.1	SUPFAM:SSF53335	UniParc:UPI0002540B67	UniProt:A0A078GR34
MapMan:35.1	:	:	:	:	:

Description

BnaA07g04710DBnaA07g04710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GR34]

Coordinates

chrLK032211:+:183324..184959

Molecular Weight (calculated)

27983.4 Da

IEP (calculated)

10.467

GRAVY (calculated)

-0.358

Length

244 amino acids

Sequence
(BLAST)

001: MAMKYYRKIS ALHLQICSRR LLLLKARIFL IHLSNGKRIL LKKVTLRKRS CLPNGTVSDS SSKFDNKIEA ASAKMYFHYY GKLLHQQNML QDYVRTVKRQ
101: SFMHWSPQLC TYHAAVMENC SDFSGRIVVD AGAKHVYAVE ASKMANYACK LIAGNPLLAE RITVIKGKIE DVELPEKADV LFSEPMGSTS QSTRNLQWFT
201: KYPGIKKNEK SLLWEDDTSS LCLKRRTRPR TAELKSRICR GTKL

Best Arabidopsis Sequence Match ( AT3G06930.1 )
(BLAST)

001: MEVSSVKKLE QLEYSLESVT DLSSSSVSSS SPAVATFSYV DGVTELRFLQ SDSTHCFNFD LASAQLFKLG PVHFICVSDG SSSSEEKSFS KGVNIKFKNE
101: KDSKDFCESF EEWRNDSVVQ GSSLQNGTVS ANKSKFDNKI EASSAKMYFH YYGQLLHQQN MLQDYVRTGT YYAAVMENHS DFAGRVVVDV GAGSGILSMF
201: AAQAGAKHVY AVEASEMAEY ARKLIAGNPL FADRITVIKG KVEDIELPEK ADILISEPMG TLLVNERMLE SYVIARDRFM TPKGKMFPTV GRIHMAPFSD
301: EFLFIEMANK AMFWQQQNYY GVDLTPLYGS AHQGYFSQPV VDAFDPRLLV ASPMFHMIDF TQMKEEDFYE IDIPLKFTAS MCTRMHGLAC WFDVLFDGST
401: VQRWLTTAPG APTTHWYQIR CVLSQPIYVM AGQEITGRLH LIAHSAQSYT IDLTLSAKMW GPGASQGGIL QSSTCKFDLK EPYYRMSQPQ AYPVAQEPPL
501: QPQPELSTQD IQTPNDELEE ELLQQLPQNP SAQL

Arabidopsis Description

PRMT13Probable histone-arginine methyltransferase 1.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84W92]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.