Factsheet for Solyc05g054240.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400021779	Potato	cytosol	75.52	96.84
Solyc12g099560.1.1	Tomato	extracellular	78.37	79.12
VIT_05s0020g01540.t01	Wine grape	cytosol, plastid	71.54	71.81
KRH37109	Soybean	cytosol	69.83	68.53
KRH02253	Soybean	cytosol	69.45	68.41
KRH12054	Soybean	cytosol	70.21	68.01
GSMUA_Achr11P...	Banana	cytosol	59.2	67.39
KRH50844	Soybean	cytosol	68.5	67.35
CDX86257	Canola	cytosol, plastid	66.03	66.54
Bra037440.1-P	Field mustard	cytosol, plastid	65.09	65.83
CDY33934	Canola	cytosol	65.28	65.03
AT3G06930.2	Thale cress	cytosol	65.84	64.86
CDX85389	Canola	cytosol	64.33	64.82
Bra029611.1-P	Field mustard	cytosol	65.28	64.78
AT5G49020.1	Thale cress	cytosol	64.9	64.77
CDY05299	Canola	cytosol	64.9	64.53
CDY24659	Canola	cytosol	64.9	64.29
Bra020667.1-P	Field mustard	cytosol	64.71	64.1
CDY05647	Canola	cytosol	64.14	63.89
Os07t0671700-01	Rice	plasma membrane	63.95	63.83
GSMUA_Achr11P...	Banana	cytosol	64.9	63.33
EER97694	Sorghum	cytosol	63.38	61.85
TraesCS2A01G114100.1	Wheat	cytosol	62.81	61.75
TraesCS2B01G133300.3	Wheat	cytosol	62.43	61.61
Zm00001d007133_P002	Maize	cytosol	62.62	60.22
HORVU2Hr1G019780.1	Barley	cytosol, mitochondrion	60.53	60.08
TraesCS2D01G114900.1	Wheat	cytosol	62.62	59.67
CDY27881	Canola	mitochondrion	20.68	44.67
Bra015140.1-P	Field mustard	mitochondrion	20.68	44.67
Solyc07g032240.2.1	Tomato	cytosol	23.15	32.53
Zm00001d022469_P001	Maize	plasma membrane	63.76	31.52
Solyc12g008760.1.1	Tomato	cytosol	21.82	29.04
Solyc08g067050.2.1	Tomato	cytosol	20.3	28.84
Solyc04g008860.2.1	Tomato	nucleus	22.01	26.91
CDY51773	Canola	nucleus	35.67	20.96
Solyc01g096550.2.1	Tomato	cytosol	21.82	18.4

Protein Annotations

MapMan:12.3.4.2	Gene3D:2.70.160.11	Gene3D:3.40.50.150	InterPro:Arg_MeTrfase	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139
GO:GO:0006355	GO:GO:0006464	GO:GO:0006479	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0008469	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0019538
GO:GO:0019919	GO:GO:0032259	GO:GO:0034969	GO:GO:0035242	InterPro:IPR025799	UniProt:K4C2A3
PFAM:PF06325	PFscan:PS51678	PANTHER:PTHR11006	PANTHER:PTHR11006:SF10	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
EnsemblPlantsGene:Solyc05g054240.2	EnsemblPlants:Solyc05g054240.2.1	UniParc:UPI0002766902	SEG:seg	:	:

Description

No Description!

Coordinates

chr5:+:64198786..64208032

Molecular Weight (calculated)

58716.8 Da

IEP (calculated)

5.233

GRAVY (calculated)

-0.139

Length

527 amino acids

Sequence
(BLAST)

001: MEVSVKENEF VVLSISEVSS SSSTSFSKSE PVFARFRSGS GAPELRFGQE SQSGADIVIN LRGSQLFRLG PAESLFISEV FEDNKETGYS RGISIQFKNK
101: EESRSFHCAF EQWKTEMVVQ GPPLPNGAVS TSTSKFDEKI EASSAKMYFH YYGQLLHQQN MLQDFVRTGT YYAAVIENRA DFLGRVVVDV GAGSGILSLF
201: AAQAGAKHVY AIEASEMAEH AKKLIAGNPS LNERITVIKG KVEEVELPVK ADILISEPMG TLLVNERMLE SYVIARDRFL VPNGKMFPAV GRIHVAPFSD
301: EYLYLEIANK AIFWQQQSYF GVDLTPLQRS AYEGYFSQPV VDAFDPRLLV APAISHAINF TLIKEEDLYE IEIPLKFACS VSTRIHGLAC WFDVLFNGST
401: VPRWLTTAPG APTTHWYQLR CVLSQPLYVM PGQEITGNFR LVAHRAQSYT IYLTLSATVG DMLQTSSGKL DLKEPYYRMS QPQAYSSAQE PNQLLQTQDV
501: LTQSWVEDGL VPVQQPSPNH GVELQTL

Best Arabidopsis Sequence Match ( AT3G06930.1 )
(BLAST)

001: MEVSSVKKLE QLEYSLESVT DLSSSSVSSS SPAVATFSYV DGVTELRFLQ SDSTHCFNFD LASAQLFKLG PVHFICVSDG SSSSEEKSFS KGVNIKFKNE
101: KDSKDFCESF EEWRNDSVVQ GSSLQNGTVS ANKSKFDNKI EASSAKMYFH YYGQLLHQQN MLQDYVRTGT YYAAVMENHS DFAGRVVVDV GAGSGILSMF
201: AAQAGAKHVY AVEASEMAEY ARKLIAGNPL FADRITVIKG KVEDIELPEK ADILISEPMG TLLVNERMLE SYVIARDRFM TPKGKMFPTV GRIHMAPFSD
301: EFLFIEMANK AMFWQQQNYY GVDLTPLYGS AHQGYFSQPV VDAFDPRLLV ASPMFHMIDF TQMKEEDFYE IDIPLKFTAS MCTRMHGLAC WFDVLFDGST
401: VQRWLTTAPG APTTHWYQIR CVLSQPIYVM AGQEITGRLH LIAHSAQSYT IDLTLSAKMW GPGASQGGIL QSSTCKFDLK EPYYRMSQPQ AYPVAQEPPL
501: QPQPELSTQD IQTPNDELEE ELLQQLPQNP SAQL

Arabidopsis Description

PRMT13Probable histone-arginine methyltransferase 1.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84W92]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.