Factsheet for Solyc07g032240.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc03g025270.2.1
Solyc07g032240.2.1
Solyc12g008760.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G19670.1	Solyc03g025270.2.1	AT4G25630.1	17666011
AT4G29510.1	Solyc03g025270.2.1	AT4G25630.1	17666011
AT4G29510.1	Solyc07g032240.2.1	AT4G29510.1	17666011
AT4G29510.1	Solyc12g008760.1.1	AT4G29510.1	17666011

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400021726	Potato	cytosol	98.67	92.73
Solyc12g008760.1.1	Tomato	cytosol	87.73	83.08
Zm00001d020188_P001	Maize	extracellular	67.47	82.68
VIT_11s0016g02530.t01	Wine grape	cytosol	76.53	82.0
KRH74166	Soybean	nucleus	77.6	77.39
KRH49040	Soybean	nucleus	78.13	77.31
CDX82711	Canola	cytosol	71.47	74.24
TraesCS5D01G195000.1	Wheat	cytosol	74.93	73.95
Bra039010.1-P	Field mustard	cytosol	71.47	73.83
CDY35877	Canola	cytosol	71.47	73.83
TraesCS5B01G187400.1	Wheat	cytosol	74.67	73.68
TraesCS5A01G196000.2	Wheat	cytosol	74.67	73.68
AT2G19670.1	Thale cress	cytosol	71.47	73.22
EER98789	Sorghum	cytosol	74.93	73.18
HORVU5Hr1G056790.7	Barley	cytosol	74.67	73.11
GSMUA_Achr6P22570_001	Banana	cytosol	74.67	72.16
CDY43510	Canola	cytosol	74.67	71.79
Bra011118.1-P	Field mustard	cytosol	74.67	71.79
CDY06802	Canola	cytosol	74.4	71.72
Os09t0359800-01	Rice	cytosol	73.87	71.58
AT4G29510.1	Thale cress	cytosol	74.13	71.28
Bra024143.1-P	Field mustard	cytosol	73.33	70.69
CDY14208	Canola	cytosol	61.87	70.52
CDY47762	Canola	cytosol	72.8	70.36
Bra010325.1-P	Field mustard	cytosol	32.27	70.35
CDY30213	Canola	cytosol	72.53	69.57
CDY03574	Canola	cytosol	53.07	69.34
Solyc04g008860.2.1	Tomato	nucleus	37.33	32.48
Solyc08g067050.2.1	Tomato	cytosol	30.4	30.73
Solyc05g054240.2.1	Tomato	cytosol	32.53	23.15
Solyc12g099560.1.1	Tomato	extracellular	30.93	22.22
Solyc01g096550.2.1	Tomato	cytosol	34.4	20.64

Protein Annotations

MapMan:12.3.4.1	Gene3D:2.70.160.11	Gene3D:3.40.50.150	InterPro:Arg_MeTrfase	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139
GO:GO:0006355	GO:GO:0006464	GO:GO:0006479	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0008469	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0019538
GO:GO:0019919	GO:GO:0032259	GO:GO:0034969	GO:GO:0035242	InterPro:IPR025799	UniProt:K4CDG6
PFAM:PF06325	PFscan:PS51678	PANTHER:PTHR11006	PANTHER:PTHR11006:SF53	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
EnsemblPlantsGene:Solyc07g032240.2	EnsemblPlants:Solyc07g032240.2.1	UniParc:UPI000276B02D	:	:	:

Description

No Description!

Coordinates

chr7:+:36542891..36547864

Molecular Weight (calculated)

42570.8 Da

IEP (calculated)

4.823

GRAVY (calculated)

-0.237

Length

375 amino acids

Sequence
(BLAST)

001: MDCRSNYENQ NSGSTSSKMK FEYEDESSNI EVEEDTSMCD PIDESIVGSN KTSADYYFDS YSHFGIHEEM LKDVVRTKTY QNVIYKNSFL IKDKVVLDVG
101: AGTGILSLFC AKVGAKHVYA IECSSMADMA QEIVKLNGFS DVITVIKGKV EEIDFPVRKV DIIISEWMGY FLLYENMLDT VLYARDKWLV KDGLVLPDKA
201: SLYLTAIEDA DYKDEKIEFW NSVYGFDMSC LQKQTIMEPL VDNVDQKQIV TNCQLLKTMD ISKMASGDAS FTVPFKLVAE RDDYIHALVA YFDVSFTKCH
301: KLTGFSTGPR SRGTHWKQTV LYLEDVLTVC QGEAVVGSMT VASNKKNPRD LDIMLKYSVN GQRCSVSRTQ CYRMR

Best Arabidopsis Sequence Match ( AT4G29510.1 )
(BLAST)

001: MTKNSNHDEN EFISFEPNQN TKIRFEDADE DEVAEGSGVA GEETPQDESM FDAGESADTA EVTDDTTSAD YYFDSYSHFG IHEEMLKDVV RTKTYQNVIY
101: QNKFLIKDKI VLDVGAGTGI LSLFCAKAGA AHVYAVECSQ MADMAKEIVK ANGFSDVITV LKGKIEEIEL PTPKVDVIIS EWMGYFLLFE NMLDSVLYAR
201: DKWLVEGGVV LPDKASLHLT AIEDSEYKED KIEFWNSVYG FDMSCIKKKA MMEPLVDTVD QNQIVTDSRL LKTMDISKMS SGDASFTAPF KLVAQRNDYI
301: HALVAYFDVS FTMCHKLLGF STGPKSRATH WKQTVLYLED VLTICEGETI TGTMSVSPNK KNPRDIDIKL SYSLNGQHCK ISRTQHYKMR

Arabidopsis Description

PRMT11Protein arginine N-methyltransferase 1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU94]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.