Factsheet for Bra024143.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra010325.1-P
Bra011118.1-P
Bra024143.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G29510.1	Bra010325.1-P	AT4G29510.1	17666011
AT4G29510.1	Bra011118.1-P	AT4G29510.1	17666011
AT4G29510.1	Bra024143.1-P	AT4G29510.1	17666011

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30213	Canola	cytosol	98.2	97.7
CDY47762	Canola	cytosol	95.89	96.13
Bra011118.1-P	Field mustard	cytosol	94.6	94.36
AT4G29510.1	Thale cress	cytosol	90.49	90.26
Bra039010.1-P	Field mustard	cytosol	77.89	83.47
Bra010325.1-P	Field mustard	cytosol	36.25	81.98
Zm00001d020188_P001	Maize	extracellular	64.27	81.7
VIT_11s0016g02530.t01	Wine grape	cytosol	71.21	79.14
KRH49040	Soybean	nucleus	74.81	76.78
KRH74166	Soybean	nucleus	74.04	76.6
TraesCS5B01G187400.1	Wheat	cytosol	72.75	74.47
TraesCS5A01G196000.2	Wheat	cytosol	72.75	74.47
TraesCS5D01G195000.1	Wheat	cytosol	72.49	74.21
Os09t0359800-01	Rice	cytosol	73.52	73.9
HORVU5Hr1G056790.7	Barley	cytosol	72.75	73.89
Solyc07g032240.2.1	Tomato	cytosol	70.69	73.33
EER98789	Sorghum	cytosol	72.24	73.18
PGSC0003DMT400000915	Potato	cytosol	73.52	72.22
Solyc12g008760.1.1	Tomato	cytosol	73.01	71.72
GSMUA_Achr6P22570_001	Banana	cytosol	71.47	71.65
PGSC0003DMT400021726	Potato	cytosol	71.72	69.92
Bra035822.1-P	Field mustard	cytosol	37.28	33.96
Bra036027.1-P	Field mustard	cytosol	13.11	33.77
Bra001772.1-P	Field mustard	cytosol	37.53	33.64
Bra022716.1-P	Field mustard	cytosol	29.31	30.4
Bra001445.1-P	Field mustard	cytosol	21.85	28.43
Bra015140.1-P	Field mustard	mitochondrion	16.2	25.82
Bra034765.1-P	Field mustard	cytosol	34.96	22.93
Bra037440.1-P	Field mustard	cytosol, plastid	29.31	21.88
Bra020667.1-P	Field mustard	cytosol	29.31	21.43
Bra029611.1-P	Field mustard	cytosol	28.79	21.09

Protein Annotations

MapMan:12.3.4.1	Gene3D:2.70.160.11	Gene3D:3.40.50.150	InterPro:Arg_MeTrfase	EnsemblPlantsGene:Bra024143	EnsemblPlants:Bra024143.1
EnsemblPlants:Bra024143.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0006479	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016740	GO:GO:0019538	GO:GO:0032259
InterPro:IPR025799	UniProt:M4E5T9	PFAM:PF06325	PFscan:PS51678	PANTHER:PTHR11006	PANTHER:PTHR11006:SF53
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0002540CC7	SEG:seg	:	:

Description

AT4G29510 (E=1e-184) ATPRMT11, PRMT11, ATPRMT1B, PRMT1B | PRMT11 (ARGININE METHYLTRANSFERASE 11); protein-arginine N-methyltransferase

Coordinates

chrA03:+:27341204..27343029

Molecular Weight (calculated)

43835.9 Da

IEP (calculated)

4.756

GRAVY (calculated)

-0.324

Length

389 amino acids

Sequence
(BLAST)

001: MTKKNNNSNE EEEEFVSFGH NLNTKIRFED ADEDETAQGS AEAATAQDES MCDAADSTTD AADDTTSADY YFDSYSHFGI HEEMLKDVVR TKTYQNVIYQ
101: NKFLIKDKVV LDVGAGTGIL SLFCAKAGAK HVYAVECSQM ADMAKEIVKA NGFSDVITVL KGKIEEIELP TPKVDVIISE WMGYFLLFEN MLDSVLYARN
201: KWLVDGGIVL PEKASLFLTA IEDSEYKEDK IEFWNSVYGF DMSCIKKKAM MEPLVDTVDQ KQIVTDSRLL KTMDISKMSS GDASFTAPFK LVAQRNDYIH
301: ALVAYFDVSF TMCHKLLGFS TGPKSRATHW KQTVMYLEDV LTICEGETIT GSMSVSYNKK NPRDVDIKLS YSLDGQHSKI SRTQHYKMR

Best Arabidopsis Sequence Match ( AT4G29510.1 )
(BLAST)

001: MTKNSNHDEN EFISFEPNQN TKIRFEDADE DEVAEGSGVA GEETPQDESM FDAGESADTA EVTDDTTSAD YYFDSYSHFG IHEEMLKDVV RTKTYQNVIY
101: QNKFLIKDKI VLDVGAGTGI LSLFCAKAGA AHVYAVECSQ MADMAKEIVK ANGFSDVITV LKGKIEEIEL PTPKVDVIIS EWMGYFLLFE NMLDSVLYAR
201: DKWLVEGGVV LPDKASLHLT AIEDSEYKED KIEFWNSVYG FDMSCIKKKA MMEPLVDTVD QNQIVTDSRL LKTMDISKMS SGDASFTAPF KLVAQRNDYI
301: HALVAYFDVS FTMCHKLLGF STGPKSRATH WKQTVLYLED VLTICEGETI TGTMSVSPNK KNPRDIDIKL SYSLNGQHCK ISRTQHYKMR

Arabidopsis Description

PRMT11Protein arginine N-methyltransferase 1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU94]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.