Factsheet for PGSC0003DMT400021726

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400000915
PGSC0003DMT400010997
PGSC0003DMT400021726
PGSC0003DMT400053912
PGSC0003DMT400077477

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G19670.1	PGSC0003DMT400010997	AT4G25630.1	17666011
AT2G19670.1	PGSC0003DMT400053912	AT4G25630.1	17666011
AT2G19670.1	PGSC0003DMT400077477	AT4G25630.1	17666011
AT4G29510.1	PGSC0003DMT400010997	AT4G25630.1	17666011
AT4G29510.1	PGSC0003DMT400053912	AT4G25630.1	17666011
AT4G29510.1	PGSC0003DMT400077477	AT4G25630.1	17666011
AT4G29510.1	PGSC0003DMT400000915	AT4G29510.1	17666011
AT4G29510.1	PGSC0003DMT400021726	AT4G29510.1	17666011

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g032240.2.1	Tomato	cytosol	92.73	98.67
PGSC0003DMT400000915	Potato	cytosol	83.96	84.6
Zm00001d020188_P001	Maize	extracellular	63.91	83.33
VIT_11s0016g02530.t01	Wine grape	cytosol	72.43	82.57
KRH74166	Soybean	nucleus	73.43	77.93
KRH49040	Soybean	nucleus	73.93	77.84
CDX82711	Canola	cytosol	67.92	75.07
Bra039010.1-P	Field mustard	cytosol	67.92	74.66
CDY35877	Canola	cytosol	67.92	74.66
TraesCS5D01G195000.1	Wheat	cytosol	70.93	74.47
TraesCS5B01G187400.1	Wheat	cytosol	70.68	74.21
TraesCS5A01G196000.2	Wheat	cytosol	70.68	74.21
AT2G19670.1	Thale cress	cytosol	67.92	74.04
EER98789	Sorghum	cytosol	70.93	73.7
HORVU5Hr1G056790.7	Barley	cytosol	70.68	73.63
GSMUA_Achr6P22570_001	Banana	cytosol	70.68	72.68
CDY43510	Canola	cytosol	70.93	72.56
Bra011118.1-P	Field mustard	cytosol	70.93	72.56
CDY06802	Canola	cytosol	70.68	72.49
Os09t0359800-01	Rice	cytosol	69.92	72.09
AT4G29510.1	Thale cress	cytosol	70.43	72.05
Bra024143.1-P	Field mustard	cytosol	69.92	71.72
CDY47762	Canola	cytosol	69.17	71.13
CDY14208	Canola	cytosol	58.65	71.12
Bra010325.1-P	Field mustard	cytosol	30.58	70.93
CDY30213	Canola	cytosol	69.17	70.59
CDY03574	Canola	cytosol	50.38	70.03
PGSC0003DMT400059570	Potato	cytosol	28.82	31.0
PGSC0003DMT400021779	Potato	cytosol	29.07	28.22
PGSC0003DMT400012001	Potato	plastid	30.08	23.03
PGSC0003DMT400008488	Potato	nucleus	32.33	20.71

Protein Annotations

EntrezGene:102585349	Gene3D:2.70.160.11	Gene3D:3.40.50.150	MapMan:35.1	InterPro:Arg_MeTrfase	GO:GO:0003674
GO:GO:0003824	GO:GO:0006464	GO:GO:0006479	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009987	GO:GO:0016740	GO:GO:0019538	GO:GO:0032259	InterPro:IPR025799	UniProt:M1AFL5
PFAM:PF06325	EnsemblPlantsGene:PGSC0003DMG400008431	PGSC:PGSC0003DMG400008431	EnsemblPlants:PGSC0003DMT400021726	PFscan:PS51678	PANTHER:PTHR11006
PANTHER:PTHR11006:SF53	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0002959BAB	:	:

Description

Protein arginine n-methyltransferase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400008431]

Coordinates

chr7:+:26032008..26036643

Molecular Weight (calculated)

44999.9 Da

IEP (calculated)

4.826

GRAVY (calculated)

-0.128

Length

399 amino acids

Sequence
(BLAST)

001: MDCRSNYENQ NSGSTSSKMK FEYEDESSNI EVEEDTSMCD PIDDSIVGSD KTSADYYFDS YSHFGIHEEM LKDVVRTKTY QNVIYKNSFL IKDKVVLDVG
101: AGTGILSLFC AKVGAKHVYA IECSSMADMA QEIVKLNGFS DVITVIKGKV EEIDLPVPKV DIIISEWMGY FLLYENMLDT VLYARDKWLV KDGLVLPDKA
201: SLYLTAIEDA DYKDEKIEFA PVLFIIGLNL SPGFQSFLHA IAVWNSVYGF DMSCLRKQTI MEPLVDNVDQ KQIVTNCQLL KTMDISKMAS GDASFTVPFK
301: LVAERDDYIH ALVAYFDVSF TKCHKLTGFS TGPRSRGTHW KQTVLYLEDV LTVCQGEAVV GSMTVASNKK NPRDLDIMLK YSVNGQRCSV SRTQCYRMR

Best Arabidopsis Sequence Match ( AT4G29510.1 )
(BLAST)

001: MTKNSNHDEN EFISFEPNQN TKIRFEDADE DEVAEGSGVA GEETPQDESM FDAGESADTA EVTDDTTSAD YYFDSYSHFG IHEEMLKDVV RTKTYQNVIY
101: QNKFLIKDKI VLDVGAGTGI LSLFCAKAGA AHVYAVECSQ MADMAKEIVK ANGFSDVITV LKGKIEEIEL PTPKVDVIIS EWMGYFLLFE NMLDSVLYAR
201: DKWLVEGGVV LPDKASLHLT AIEDSEYKED KIEFWNSVYG FDMSCIKKKA MMEPLVDTVD QNQIVTDSRL LKTMDISKMS SGDASFTAPF KLVAQRNDYI
301: HALVAYFDVS FTMCHKLLGF STGPKSRATH WKQTVLYLED VLTICEGETI TGTMSVSPNK KNPRDIDIKL SYSLNGQHCK ISRTQHYKMR

Arabidopsis Description

PRMT11Protein arginine N-methyltransferase 1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU94]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.