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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • plastid 4
  • cytosol 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc12g099560.1.1 Tomato extracellular 98.08 97.89
PGSC0003DMT400021779 Potato cytosol 67.95 86.13
VIT_05s0020g01540.t01 Wine grape cytosol, plastid 71.78 71.24
KRH02253 Soybean cytosol 72.17 70.28
GSMUA_Achr11P... Banana cytosol 61.61 69.33
KRH50844 Soybean cytosol 71.02 69.03
CDX86257 Canola cytosol, plastid 68.71 68.45
KRH12054 Soybean cytosol 71.4 68.38
KRH37109 Soybean cytosol 70.44 68.34
Bra037440.1-P Field mustard cytosol, plastid 67.95 67.95
CDX85389 Canola cytosol 67.95 67.69
CDY33934 Canola cytosol 67.75 66.73
Bra029611.1-P Field mustard cytosol 67.95 66.67
AT5G49020.1 Thale cress cytosol 67.37 66.48
CDY24659 Canola cytosol 67.75 66.35
Bra020667.1-P Field mustard cytosol 67.75 66.35
CDY05299 Canola cytosol 67.18 66.04
CDY05647 Canola cytosol 66.79 65.78
AT3G06930.2 Thale cress cytosol 67.18 65.42
Os07t0671700-01 Rice plasma membrane 65.64 64.77
GSMUA_Achr11P... Banana cytosol 66.6 64.26
TraesCS2B01G133300.3 Wheat cytosol 64.88 63.3
TraesCS2A01G114100.1 Wheat cytosol 65.07 63.25
EER97694 Sorghum cytosol 65.07 62.78
HORVU2Hr1G019780.1 Barley cytosol, mitochondrion 62.96 61.77
TraesCS2D01G114900.1 Wheat cytosol 64.88 61.12
Zm00001d007133_P002 Maize cytosol 63.72 60.58
CDY27881 Canola mitochondrion 21.31 45.49
Bra015140.1-P Field mustard mitochondrion 21.31 45.49
Zm00001d022469_P001 Maize plasma membrane 66.03 32.27
PGSC0003DMT400021726 Potato cytosol 23.03 30.08
PGSC0003DMT400000915 Potato cytosol 21.69 28.54
PGSC0003DMT400059570 Potato cytosol 19.58 27.49
CDY51773 Canola nucleus 35.7 20.74
PGSC0003DMT400008488 Potato nucleus 21.11 17.66
Protein Annotations
EntrezGene:102604413MapMan:12.3.4.2Gene3D:2.70.160.11Gene3D:3.40.50.150InterPro:Arg_MeTrfaseGO:GO:0003674
GO:GO:0003824GO:GO:0006464GO:GO:0006479GO:GO:0008150GO:GO:0008152GO:GO:0008168
GO:GO:0009987GO:GO:0016740GO:GO:0019538GO:GO:0032259InterPro:IPR025799UniProt:M1A0J1
PFAM:PF06325EnsemblPlantsGene:PGSC0003DMG400004710PGSC:PGSC0003DMG400004710EnsemblPlants:PGSC0003DMT400012001PFscan:PS51678PANTHER:PTHR11006
PANTHER:PTHR11006:SF10InterPro:SAM-dependent_MTasesSUPFAM:SSF53335UniParc:UPI0002962D88RefSeq:XP_006349813.1SEG:seg
Description
Protein arginine n-methyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400004710]
Coordinates
chr12:-:60213668..60223125
Molecular Weight (calculated)
58284.2 Da
IEP (calculated)
5.329
GRAVY (calculated)
-0.221
Length
521 amino acids
Sequence
(BLAST)
001: MEENQKQKQF LVSSVSELTS SSSSLFSKTE PVFARLSLDS GSPELRIGQG AELSDAVVFN VKISQLFKLG PAESLCVSEA NKEKSHSRGI SIQFRNEEES
101: RAFHCAFEQW KKEVVVQEPL NNGAVSTSKS KFDDKIEASS AKMYFHYYGQ LLHQQNMLQD FVRTGTYYSA VIENRADFLD RVVVDVGAGS GILSLFAAQA
201: GAKHVYAIEA SEMADYARQL IAGNPSLNDR ITVIKGKVED VELPEKADIL ISEPMGTLLV NERMLESYVI ARDRFLVQNG KMFPGVGRIH MAPFSDEYLY
301: MEIANKATFW QQQNYFGVDL TPLHGSAYQG YFSQPVVDAF DSRLLVAPAV SHVINFSSVK EEDLYEIDVP LRFLSTVSTR IHGLACWFDV LFNGSTVQRW
401: LTTAPGAPTT HWYQLRCVLP QPLYVMPGQE ITGRLHLVAH KAQSYTIYLT LSALVGDMLQ TSSVKLDLKE PYYRMSQPQA YSAAQDQNPS QLLQSDMQFP
501: SRDDDGSILM QPPSPNELHS L
Best Arabidopsis Sequence Match ( AT3G06930.2 )
(BLAST)
001: MEVSSVKKLE QLEYSLESVT DLSSSSVSSS SPAVATFSYV DGVTELRFLQ SDSTHCFNFD LASAQLFKLG PVHFICVSDG SSSSEEKSFS KGVNIKFKNE
101: KDSKDFCESF EEWRNDSVVQ GSSLQNGTVS ANKSKFDNKI EASSAKMYFH YYGQLLHQQN MLQDYVRTGT YYAAVMENHS DFAGRVVVDV GAGSGILSMF
201: AAQAGAKHVY AVEASEMAEY ARKLIAGNPL FADRITVIKG KVEDIELPEK ADILISEPMG TLLVNERMLE SYVIARDRFM TPKGKMFPTV GRIHMAPFSD
301: EFLFIEMANK AMFWQQQNYY GVDLTPLYGS AHQGYFSQPV VDAFDPRLLV ASPMFHMIDF TQMKEEDFYE IDIPLKFTAS MCTRMHGLAC WFDVLFDGST
401: VQRWLTTAPG APTTHWYQIR CVLSQPIYVM AGQEITGRLH LIAHSAQSYT IDLTLSAKMW GPGASQGGIL QSSTCKFDLK EPYYRMSQPQ AYPVAQEPPL
501: QPQPELSTQQ DIQTPNDELE EELLQQLPQN PSAQL
Arabidopsis Description
PRMT13Probable histone-arginine methyltransferase 1.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84W92]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.