Factsheet for GSMUA_Achr11P15840_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	87.47	75.0
PGSC0003DMT400021779	Potato	cytosol	65.01	73.24
Os07t0671700-01	Rice	plasma membrane	74.08	64.96
EER97694	Sorghum	cytosol	74.95	64.26
TraesCS2B01G133300.3	Wheat	cytosol	73.65	63.86
TraesCS2A01G114100.1	Wheat	cytosol	73.87	63.81
HORVU2Hr1G019780.1	Barley	cytosol, mitochondrion	72.57	63.28
VIT_05s0020g01540.t01	Wine grape	cytosol, plastid	71.49	63.05
KRH02253	Soybean	cytosol	72.35	62.62
KRH50844	Soybean	cytosol	71.92	62.13
TraesCS2D01G114900.1	Wheat	cytosol	74.08	62.03
KRH37109	Soybean	cytosol	71.92	62.01
Zm00001d007133_P002	Maize	cytosol	73.22	61.86
Solyc12g099560.1.1	Tomato	extracellular	69.55	61.69
PGSC0003DMT400012001	Potato	plastid	69.33	61.61
KRH12054	Soybean	cytosol	72.35	61.58
CDX85389	Canola	cytosol	68.9	60.99
Bra037440.1-P	Field mustard	cytosol, plastid	68.47	60.84
CDX86257	Canola	cytosol, plastid	68.68	60.8
CDY33934	Canola	cytosol	69.11	60.49
CDY05647	Canola	cytosol	68.68	60.11
AT5G49020.1	Thale cress	cytosol	68.47	60.04
CDY24659	Canola	cytosol	68.9	59.96
Bra020667.1-P	Field mustard	cytosol	68.9	59.96
Bra029611.1-P	Field mustard	cytosol	68.68	59.89
CDY05299	Canola	cytosol	68.25	59.62
Solyc05g054240.2.1	Tomato	cytosol	67.39	59.2
AT3G06930.2	Thale cress	cytosol	68.25	59.07
GSMUA_AchrUn_...	Banana	cytosol, vacuole	5.4	49.02
CDY27881	Canola	mitochondrion	23.33	44.26
Bra015140.1-P	Field mustard	mitochondrion	23.33	44.26
Zm00001d022469_P001	Maize	plasma membrane	75.38	32.74
GSMUA_Achr10P...	Banana	cytosol	25.7	31.4
GSMUA_Achr6P22570_001	Banana	cytosol	23.33	27.84
GSMUA_Achr5P10850_001	Banana	cytosol, golgi, plastid	18.36	25.76
GSMUA_Achr5P10840_001	Banana	cytosol	23.54	24.94
GSMUA_AchrUn_...	Banana	cytosol	12.74	24.38
CDY51773	Canola	nucleus	39.74	20.51
GSMUA_Achr3P09300_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	23.54	16.64

Protein Annotations

MapMan:12.3.4.2	Gene3D:2.70.160.11	Gene3D:3.40.50.150	InterPro:Arg_MeTrfase	GO:GO:0003674	GO:GO:0003824
GO:GO:0006464	GO:GO:0006479	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987
GO:GO:0016740	GO:GO:0019538	GO:GO:0032259	EnsemblPlantsGene:GSMUA_Achr11G15840_001	EnsemblPlants:GSMUA_Achr11P15840_001	EnsemblPlants:GSMUA_Achr11T15840_001
InterPro:IPR025799	UniProt:M0RSL4	PFAM:PF06325	PFscan:PS51678	PANTHER:PTHR11006	PANTHER:PTHR11006:SF10
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0002964F8F	:	:	:

Description

Probable histone-arginine methyltransferase CARM1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G15840_001]

Coordinates

chr11:-:17528046..17544194

Molecular Weight (calculated)

51831.9 Da

IEP (calculated)

6.322

GRAVY (calculated)

-0.165

Length

463 amino acids

Sequence
(BLAST)

001: MQKYFSRVFK IGFNTKDETK AFHLAFEQWK LGVVVAKTGG PLENGSLTTP KSKFDNKIDA TSAKMYFHYY GQLLHQQNML QDYVRTGTYY AAVIENRIDF
101: SGRIVLDVGA GSGILSLFAA QAGAKHVYAV EASEMAEYAR RLIAGNPSLG QRITVIKGKI EEVDLPEKAD ILISEPMGTL LVNERMLETY VIARDRFLIP
201: DGKMFPSLGR IHMAPFSDEY LYVEIANKAL FWQQHNYYGV DLTSLYGSAF QGYFSQPVVD AFDPRLLISQ PIVHTLDFTC MKEEDLYEID IPLNFVSSVG
301: TRVHGLACWF DVLFNGSSVQ RWLTTAPGAP TTHWYQLRCV LAQPIYVMAG QEITGRFHLV SHNAQSYTIY LTLSAKTWGA GADQGGILQT FSCKLDLKEP
401: YYRLSQPLPY VLQQDQQSNT ELMQSQELSP QIQDGTGPSL AIIPSQISEA SEQQHKHGSC SGS

Best Arabidopsis Sequence Match ( AT3G06930.2 )
(BLAST)

001: MEVSSVKKLE QLEYSLESVT DLSSSSVSSS SPAVATFSYV DGVTELRFLQ SDSTHCFNFD LASAQLFKLG PVHFICVSDG SSSSEEKSFS KGVNIKFKNE
101: KDSKDFCESF EEWRNDSVVQ GSSLQNGTVS ANKSKFDNKI EASSAKMYFH YYGQLLHQQN MLQDYVRTGT YYAAVMENHS DFAGRVVVDV GAGSGILSMF
201: AAQAGAKHVY AVEASEMAEY ARKLIAGNPL FADRITVIKG KVEDIELPEK ADILISEPMG TLLVNERMLE SYVIARDRFM TPKGKMFPTV GRIHMAPFSD
301: EFLFIEMANK AMFWQQQNYY GVDLTPLYGS AHQGYFSQPV VDAFDPRLLV ASPMFHMIDF TQMKEEDFYE IDIPLKFTAS MCTRMHGLAC WFDVLFDGST
401: VQRWLTTAPG APTTHWYQIR CVLSQPIYVM AGQEITGRLH LIAHSAQSYT IDLTLSAKMW GPGASQGGIL QSSTCKFDLK EPYYRMSQPQ AYPVAQEPPL
501: QPQPELSTQQ DIQTPNDELE EELLQQLPQN PSAQL

Arabidopsis Description

PRMT13Probable histone-arginine methyltransferase 1.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84W92]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.