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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 5
  • cytosol 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol, plastid
Predotar:plastid
PProwler:plastid
TargetP:secretory
WoLF PSORT:plastid
YLoc:cytosol
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER97694 Sorghum cytosol 88.26 86.3
Zm00001d007133_P002 Maize cytosol 87.12 83.94
TraesCS2A01G114100.1 Wheat cytosol 83.71 82.46
TraesCS2B01G133300.3 Wheat cytosol 83.14 82.21
TraesCS2D01G114900.1 Wheat cytosol 83.33 79.57
HORVU2Hr1G019780.1 Barley cytosol, mitochondrion 78.03 77.59
GSMUA_Achr11P... Banana cytosol 64.96 74.08
PGSC0003DMT400021779 Potato cytosol 56.82 72.99
GSMUA_Achr11P... Banana cytosol 71.59 70.0
VIT_05s0020g01540.t01 Wine grape cytosol, plastid 67.05 67.43
KRH37109 Soybean cytosol 67.99 66.85
KRH12054 Soybean cytosol 68.56 66.54
KRH02253 Soybean cytosol 67.42 66.54
KRH50844 Soybean cytosol 66.86 65.86
PGSC0003DMT400012001 Potato plastid 64.77 65.64
Solyc12g099560.1.1 Tomato extracellular 64.77 65.52
Bra029611.1-P Field mustard cytosol 65.53 65.16
CDY24659 Canola cytosol 65.53 65.04
CDY05299 Canola cytosol 64.77 64.53
CDX86257 Canola cytosol, plastid 63.64 64.24
AT3G06930.2 Thale cress cytosol 64.96 64.11
Solyc05g054240.2.1 Tomato cytosol 63.83 63.95
Bra037440.1-P Field mustard cytosol, plastid 62.88 63.72
CDY33934 Canola cytosol 63.83 63.71
CDX85389 Canola cytosol 63.07 63.67
CDY05647 Canola cytosol 63.64 63.52
AT5G49020.1 Thale cress cytosol 63.45 63.45
Bra020667.1-P Field mustard cytosol 63.64 63.16
CDY27881 Canola mitochondrion 21.02 45.49
Bra015140.1-P Field mustard mitochondrion 21.02 45.49
Zm00001d022469_P001 Maize plasma membrane 86.74 42.96
Os06t0142800-01 Rice cytosol 22.73 31.58
Os09t0359800-01 Rice cytosol 21.59 29.46
Os10t0489100-01 Rice cytosol, nucleus 21.02 28.1
Os07t0640000-01 Rice cytosol 19.89 26.05
Os04t0677066-00 Rice nucleus 18.94 25.45
CDY51773 Canola nucleus 36.74 21.63
Os07t0640100-01 Rice mitochondrion 0.0 0.0
Protein Annotations
MapMan:12.3.4.2Gene3D:2.70.160.11Gene3D:3.40.50.150EntrezGene:4344248EMBL:AK065980InterPro:Arg_MeTrfase
ProteinID:BAC79844.1ProteinID:BAF22514.1ProteinID:BAT03158.1ProteinID:EEE67794.1GO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005829
GO:GO:0006139GO:GO:0006325GO:GO:0006351GO:GO:0006355GO:GO:0006464GO:GO:0006479
GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0008469GO:GO:0009058GO:GO:0009987
GO:GO:0016043GO:GO:0016740GO:GO:0019538GO:GO:0019919GO:GO:0032259GO:GO:0034969
GO:GO:0035242GO:GO:0042054InterPro:IPR025799EnsemblPlantsGene:Os07g0671700EnsemblPlants:Os07t0671700-01PFAM:PF06325
PFscan:PS51678PANTHER:PTHR11006PANTHER:PTHR11006:SF10UniProt:Q7XI75InterPro:SAM-dependent_MTasesSUPFAM:SSF53335
UniParc:UPI00001B3A5FRefSeq:XP_015647687.1SEG:seg:::
Description
PROTEIN ARGININE METHYLTRANSFERASE 4Similar to Arginine methyltransferase-like protein. (Os07t0671700-01)
Coordinates
chr7:+:28402333..28409552
Molecular Weight (calculated)
58583.6 Da
IEP (calculated)
5.562
GRAVY (calculated)
-0.188
Length
528 amino acids
Sequence
(BLAST)
001: MASPDLFPNV SFSHVSVPAA AGASTEVTGG ATAVFGGDAS TGAPRLSLVW SGETQAKHTL EIDLSDAQIF KLGPTEWLCV SGESEAKDGV EEKSYSRAIK
101: VVLRTEAESK AFYLAFQQWK HRVISGKAGE PLENGLIIGS KSKFDTKIEA SSAKMYFHYY GQLLHQQNML QDFVRTGTYY AAVMENRSDF EGRVVVDVGA
201: GSGILSLFAA QAGARHVYAV EASEMAEHAQ RLISGNPSLG QRITVIKGKV EEVELPEKAD ILISEPMGTL LVNERMLESY VIARDRFLVP GGKMFPTTGR
301: IHMAPFSDEY LYVEMANKAL FWQQHNFFGV DLTPLHGSAF QGYFSQPVVD AFDPRLLVSP PTFHTLDFTT MKEEELYEID IPLNFVASVG TRVHGLACWF
401: DVLFNGSTVQ RWLTTAPGSP TTHWYQLRCI LSQPLYVMAG QEITGRLHLV AHSAQSYTIY LTMSAKMWGE GAEQGGILQT STAKLELKEP YYRLSQPQPY
501: VMQQDQQQQQ LPSLQPQSPL WDYHYGQD
Best Arabidopsis Sequence Match ( AT3G06930.2 )
(BLAST)
001: MEVSSVKKLE QLEYSLESVT DLSSSSVSSS SPAVATFSYV DGVTELRFLQ SDSTHCFNFD LASAQLFKLG PVHFICVSDG SSSSEEKSFS KGVNIKFKNE
101: KDSKDFCESF EEWRNDSVVQ GSSLQNGTVS ANKSKFDNKI EASSAKMYFH YYGQLLHQQN MLQDYVRTGT YYAAVMENHS DFAGRVVVDV GAGSGILSMF
201: AAQAGAKHVY AVEASEMAEY ARKLIAGNPL FADRITVIKG KVEDIELPEK ADILISEPMG TLLVNERMLE SYVIARDRFM TPKGKMFPTV GRIHMAPFSD
301: EFLFIEMANK AMFWQQQNYY GVDLTPLYGS AHQGYFSQPV VDAFDPRLLV ASPMFHMIDF TQMKEEDFYE IDIPLKFTAS MCTRMHGLAC WFDVLFDGST
401: VQRWLTTAPG APTTHWYQIR CVLSQPIYVM AGQEITGRLH LIAHSAQSYT IDLTLSAKMW GPGASQGGIL QSSTCKFDLK EPYYRMSQPQ AYPVAQEPPL
501: QPQPELSTQQ DIQTPNDELE EELLQQLPQN PSAQL
Arabidopsis Description
PRMT13Probable histone-arginine methyltransferase 1.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84W92]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.