Factsheet for PGSC0003DMT400021779

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g054240.2.1	Tomato	cytosol	96.84	75.52
PGSC0003DMT400012001	Potato	plastid	86.13	67.95
GSMUA_Achr11P...	Banana	cytosol	73.24	65.01
VIT_05s0020g01540.t01	Wine grape	cytosol, plastid	77.37	60.57
KRH02253	Soybean	cytosol	78.59	60.37
KRH37109	Soybean	cytosol	78.1	59.78
KRH50844	Soybean	cytosol	77.62	59.51
KRH12054	Soybean	cytosol	78.1	59.01
CDX86257	Canola	cytosol, plastid	74.45	58.51
CDY05299	Canola	cytosol	75.18	58.3
Bra029611.1-P	Field mustard	cytosol	75.18	58.19
CDY24659	Canola	cytosol	75.18	58.08
Bra037440.1-P	Field mustard	cytosol, plastid	73.24	57.77
CDX85389	Canola	cytosol	73.48	57.74
AT3G06930.2	Thale cress	cytosol	74.94	57.57
CDY33934	Canola	cytosol	73.97	57.47
AT5G49020.1	Thale cress	cytosol	73.72	57.39
Bra020667.1-P	Field mustard	cytosol	73.97	57.14
Os07t0671700-01	Rice	plasma membrane	72.99	56.82
CDY05647	Canola	cytosol	72.99	56.71
GSMUA_Achr11P...	Banana	cytosol	73.72	56.11
HORVU2Hr1G019780.1	Barley	cytosol, mitochondrion	72.26	55.93
TraesCS2B01G133300.3	Wheat	cytosol	72.51	55.81
TraesCS2A01G114100.1	Wheat	cytosol	72.75	55.78
EER97694	Sorghum	cytosol	73.24	55.74
Zm00001d007133_P002	Maize	cytosol	72.75	54.56
TraesCS2D01G114900.1	Wheat	cytosol	72.75	54.07
CDY27881	Canola	mitochondrion	25.79	43.44
Bra015140.1-P	Field mustard	mitochondrion	25.79	43.44
PGSC0003DMT400021726	Potato	cytosol	28.22	29.07
Zm00001d022469_P001	Maize	plasma membrane	73.97	28.52
PGSC0003DMT400000915	Potato	cytosol	26.76	27.78
PGSC0003DMT400059570	Potato	cytosol	25.06	27.76
CDY51773	Canola	nucleus	42.82	19.62
PGSC0003DMT400008488	Potato	nucleus	25.06	16.53

Protein Annotations

MapMan:12.3.4.2	Gene3D:2.70.160.11	Gene3D:3.40.50.150	InterPro:Arg_MeTrfase	GO:GO:0003674	GO:GO:0003824
GO:GO:0006464	GO:GO:0006479	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987
GO:GO:0016740	GO:GO:0019538	GO:GO:0032259	InterPro:IPR025799	UniProt:M1AFP3	PFAM:PF06325
EnsemblPlantsGene:PGSC0003DMG400008452	PGSC:PGSC0003DMG400008452	EnsemblPlants:PGSC0003DMT400021779	PFscan:PS51678	PANTHER:PTHR11006	PANTHER:PTHR11006:SF10
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI000294ADF5	:	:	:

Description

Protein arginine n-methyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400008452]

Coordinates

chr5:+:49894328..49903390

Molecular Weight (calculated)

45800.9 Da

IEP (calculated)

5.772

GRAVY (calculated)

-0.080

Length

411 amino acids

Sequence
(BLAST)

001: MVVQGSPLPN GAVSTSTSKF DEKIEASSAK MYFHYYGQLL HQQNMLQDFV RTGTYYAAVI ENRADFLGRV VVDVGAGSGI LSLFAAQAGA KHVYAIEASE
101: MAEYAKKLIA GNPSLNERIT VIKGKVEEVE LPVKADILIS EPMGTLLVNE RMLESYVIAR DRFLVPNGKM FPAVGRIHMA PFSDEYLYME IANKAIFWQQ
201: QSYFGVDLTP LQRSAYEGYF SQPVVDAFDP RLLVAPAISH VINFTSIKEE DLYEIEIPLK FACSVSTRIH GLACWFDVLF NGSTVPRWLT TAPGAPTTHW
301: YQLRCVLPQP LYVMPGQEIT GHFRLVAHKA QSYTIYLTLS ATVGDMLQTS SGKLDLKEPY YRMSQPQAYS SAQEPNQLLQ TQDVLTQSWV EDGSVPVQQP
401: SPNHGAELHP L

Best Arabidopsis Sequence Match ( AT3G06930.1 )
(BLAST)

001: MEVSSVKKLE QLEYSLESVT DLSSSSVSSS SPAVATFSYV DGVTELRFLQ SDSTHCFNFD LASAQLFKLG PVHFICVSDG SSSSEEKSFS KGVNIKFKNE
101: KDSKDFCESF EEWRNDSVVQ GSSLQNGTVS ANKSKFDNKI EASSAKMYFH YYGQLLHQQN MLQDYVRTGT YYAAVMENHS DFAGRVVVDV GAGSGILSMF
201: AAQAGAKHVY AVEASEMAEY ARKLIAGNPL FADRITVIKG KVEDIELPEK ADILISEPMG TLLVNERMLE SYVIARDRFM TPKGKMFPTV GRIHMAPFSD
301: EFLFIEMANK AMFWQQQNYY GVDLTPLYGS AHQGYFSQPV VDAFDPRLLV ASPMFHMIDF TQMKEEDFYE IDIPLKFTAS MCTRMHGLAC WFDVLFDGST
401: VQRWLTTAPG APTTHWYQIR CVLSQPIYVM AGQEITGRLH LIAHSAQSYT IDLTLSAKMW GPGASQGGIL QSSTCKFDLK EPYYRMSQPQ AYPVAQEPPL
501: QPQPELSTQD IQTPNDELEE ELLQQLPQNP SAQL

Arabidopsis Description

PRMT13Probable histone-arginine methyltransferase 1.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84W92]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.