Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029611.1-P | Field mustard | cytosol | 88.6 | 89.27 |
| CDY24659 | Canola | cytosol | 88.6 | 89.1 |
| CDY05299 | Canola | cytosol | 88.22 | 89.06 |
| AT5G49020.1 | Thale cress | cytosol | 80.93 | 82.01 |
| PGSC0003DMT400021779 | Potato | cytosol | 57.57 | 74.94 |
| VIT_05s0020g01540.t01 | Wine grape | cytosol, plastid | 70.09 | 71.43 |
| KRH02253 | Soybean | cytosol | 71.03 | 71.03 |
| KRH50844 | Soybean | cytosol | 70.47 | 70.34 |
| KRH37109 | Soybean | cytosol | 70.28 | 70.02 |
| KRH12054 | Soybean | cytosol | 70.65 | 69.49 |
| GSMUA_Achr11P... | Banana | cytosol | 59.07 | 68.25 |
| Solyc12g099560.1.1 | Tomato | extracellular | 65.79 | 67.43 |
| PGSC0003DMT400012001 | Potato | plastid | 65.42 | 67.18 |
| Solyc05g054240.2.1 | Tomato | cytosol | 64.86 | 65.84 |
| GSMUA_Achr11P... | Banana | cytosol | 65.61 | 65.0 |
| Os07t0671700-01 | Rice | plasma membrane | 64.11 | 64.96 |
| EER97694 | Sorghum | cytosol | 64.49 | 63.89 |
| TraesCS2A01G114100.1 | Wheat | cytosol | 62.99 | 62.87 |
| TraesCS2B01G133300.3 | Wheat | cytosol | 62.43 | 62.55 |
| Zm00001d007133_P002 | Maize | cytosol | 63.18 | 61.68 |
| HORVU2Hr1G019780.1 | Barley | cytosol, mitochondrion | 60.93 | 61.39 |
| TraesCS2D01G114900.1 | Wheat | cytosol | 62.8 | 60.76 |
| Zm00001d022469_P001 | Maize | plasma membrane | 64.3 | 32.27 |
| AT2G19670.1 | Thale cress | cytosol | 20.75 | 30.33 |
| AT1G04870.2 | Thale cress | cytosol | 21.5 | 30.03 |
| AT4G29510.1 | Thale cress | cytosol | 21.5 | 29.49 |
| AT3G20020.3 | Thale cress | cytosol | 23.18 | 27.99 |
| CDY51773 | Canola | nucleus | 38.32 | 22.85 |
| AT3G12270.1 | Thale cress | cytosol | 23.36 | 20.8 |
Protein Annotations
| MapMan:12.3.4.2 | Gene3D:2.70.160.11 | Gene3D:3.40.50.150 | EntrezGene:819878 | ProteinID:AAF26997.1 | ProteinID:AEE74477.1 |
| ProteinID:AEE74478.1 | EMBL:AK228202 | ArrayExpress:AT3G06930 | EnsemblPlantsGene:AT3G06930 | RefSeq:AT3G06930 | TAIR:AT3G06930 |
| RefSeq:AT3G06930-TAIR-G | EnsemblPlants:AT3G06930.2 | TAIR:AT3G06930.2 | Symbol:ATPRMT4B | InterPro:Arg_MeTrfase | EMBL:BT004102 |
| EMBL:BT015414 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0006139 | GO:GO:0006325 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006464 | GO:GO:0006479 |
| GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008469 |
| GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009909 |
| GO:GO:0009987 | GO:GO:0010228 | GO:GO:0016043 | GO:GO:0016277 | GO:GO:0016569 | GO:GO:0016740 |
| GO:GO:0019538 | GO:GO:0019919 | GO:GO:0032259 | GO:GO:0034970 | GO:GO:0034971 | GO:GO:0034972 |
| GO:GO:0035241 | GO:GO:0035242 | GO:GO:0042803 | GO:GO:0045893 | GO:GO:0046686 | GO:GO:0046982 |
| GO:GO:1902884 | InterPro:IPR025799 | RefSeq:NP_187349.2 | RefSeq:NP_850528.1 | PFAM:PF06325 | PO:PO:0000013 |
| PO:PO:0000034 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007130 | PO:PO:0007134 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009049 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0020147 | PO:PO:0020148 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS51678 | PANTHER:PTHR11006 | PANTHER:PTHR11006:SF10 | UniProt:Q84W92 | InterPro:SAM-dependent_MTases |
| SUPFAM:SSF53335 | UniParc:UPI0000196B59 | SEG:seg | : | : | : |
Description
PRMT13Probable histone-arginine methyltransferase 1.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84W92]
Coordinates
chr3:-:2185143..2189387
Molecular Weight (calculated)
59918.0 Da
IEP (calculated)
4.793
GRAVY (calculated)
-0.246
Length
535 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVSSVKKLE QLEYSLESVT DLSSSSVSSS SPAVATFSYV DGVTELRFLQ SDSTHCFNFD LASAQLFKLG PVHFICVSDG SSSSEEKSFS KGVNIKFKNE
101: KDSKDFCESF EEWRNDSVVQ GSSLQNGTVS ANKSKFDNKI EASSAKMYFH YYGQLLHQQN MLQDYVRTGT YYAAVMENHS DFAGRVVVDV GAGSGILSMF
201: AAQAGAKHVY AVEASEMAEY ARKLIAGNPL FADRITVIKG KVEDIELPEK ADILISEPMG TLLVNERMLE SYVIARDRFM TPKGKMFPTV GRIHMAPFSD
301: EFLFIEMANK AMFWQQQNYY GVDLTPLYGS AHQGYFSQPV VDAFDPRLLV ASPMFHMIDF TQMKEEDFYE IDIPLKFTAS MCTRMHGLAC WFDVLFDGST
401: VQRWLTTAPG APTTHWYQIR CVLSQPIYVM AGQEITGRLH LIAHSAQSYT IDLTLSAKMW GPGASQGGIL QSSTCKFDLK EPYYRMSQPQ AYPVAQEPPL
501: QPQPELSTQQ DIQTPNDELE EELLQQLPQN PSAQL
101: KDSKDFCESF EEWRNDSVVQ GSSLQNGTVS ANKSKFDNKI EASSAKMYFH YYGQLLHQQN MLQDYVRTGT YYAAVMENHS DFAGRVVVDV GAGSGILSMF
201: AAQAGAKHVY AVEASEMAEY ARKLIAGNPL FADRITVIKG KVEDIELPEK ADILISEPMG TLLVNERMLE SYVIARDRFM TPKGKMFPTV GRIHMAPFSD
301: EFLFIEMANK AMFWQQQNYY GVDLTPLYGS AHQGYFSQPV VDAFDPRLLV ASPMFHMIDF TQMKEEDFYE IDIPLKFTAS MCTRMHGLAC WFDVLFDGST
401: VQRWLTTAPG APTTHWYQIR CVLSQPIYVM AGQEITGRLH LIAHSAQSYT IDLTLSAKMW GPGASQGGIL QSSTCKFDLK EPYYRMSQPQ AYPVAQEPPL
501: QPQPELSTQQ DIQTPNDELE EELLQQLPQN PSAQL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.